Details from NCBI annotation

Gene Symbol Ebf1
Gene Name early B-cell factor 1, transcript variant X1
Entrez Gene ID 101702802

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EBF1 ENSCPOG00000026184 (Guinea pig)

Gene Details

early B-cell factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018411, Guinea pig)

Protein Percentage 98.99%
CDS Percentage 96.23%
Ka/Ks Ratio 0.0313 (Ka = 0.0047, Ks = 0.149)

EBF1 ENSG00000164330 (Human)

Gene Details

early B-cell factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000322898, Human)

Protein Percentage 100.0%
CDS Percentage 94.7%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2552)

Ebf1 ENSMUSG00000057098 (Mouse)

Gene Details

early B cell factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080020, Mouse)

Protein Percentage 100.0%
CDS Percentage 93.91%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3089)

Genome Location

Sequence Coding sequence

Length: 1779 bp    Location: 30328004..30734483   Strand: +
>XM_004836475.1
ATGTTCGGGATTCAGGAAAGCATCCAACGGAGTGGCAGCAGCATGAAGGAAGAGCCGCTGGGCAGCGGCATGAACGCGGTGCGGACGTGGATGCAGGGCGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGAGCGGGGTGGGTCTGGCCCGGGCTCACTTTGAGAAGCAGCCGCCTTCCAATCTTCGGAAATCCAACTTCTTCCACTTCGTCCTGGCCCTCTACGACAGACAGGGCCAGCCTGTGGAGATCGAGAGGACAGCCTTTGTGGGGTTCGTGGAGAAGGAAAAAGAAGCCAACAGCGAGAAGACCAATAACGGGATTCACTACCGGCTGCAGCTCCTTTACAGCAATGGGATAAGGACAGAGCAAGATTTCTACGTGCGCCTCATTGACTCCATGACAAAACAAGCCATAGTGTATGAAGGCCAAGACAAGAACCCTGAAATGTGCCGAGTCTTGCTCACGCATGAGATCATGTGCAGCCGCTGTTGTGACAAGAAAAGCTGTGGCAACCGAAATGAGACTCCTTCAGATCCAGTGATAATTGACAGGTTCTTCTTGAAGTTTTTCCTCAAATGCAACCAAAATTGCCTAAAGAATGCAGGAAACCCACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTACAACAGTCAACGTGGATGGCCATGTCCTGGCAGTCTCTGATAACATGTTTGTTCATAATAACTCGAAGCATGGGCGGAGGGCTCGGAGGCTTGACCCCTCGGAAGGTACGCCCTCTTATCTGGAACATGCAGCTACTCCCTGTATCAAAGCCATCAGCCCGAGTGAAGGATGGACAACGGGAGGTGCGACTGTGATCATCATAGGGGACAATTTCTTTGATGGGTTACAGGTCATATTCGGTACCATGCTGGTCTGGAGTGAGTTGATTACTCCTCATGCCATCCGTGTGCAGACACCTCCTCGGCACATCCCGGGTGTTGTGGAAGTTACATTGTCCTACAAATCTAAGCAGTTCTGCAAAGGGACCCCGGGCAGATTCATTTACACAGCACTCAACGAACCCACCATCGACTATGGTTTCCAGAGATTACAAAAGGTCATTCCCAGGCATCCTGGTGACCCTGAGCGTCTGCCGAAGGAAGTGATACTCAAAAGGGCTGCAGACCTGGTGGAAGCCCTGTATGGGATGCCCCACAACAACCAGGAAATTATCCTGAAGAGAGCGGCCGACATCGCAGAGGCCCTCTACAGTGTCCCTCGCAACCACAACCAGCTTCCGGCCCTCGCCAACACCTCGGTCCATGCAGGGATGATGGGTGTGAACTCGTTCAGTGGACAACTGGCTGTGAATGTCTCGGAGGCGTCGCAAGCCACCAACCAGGGCTTCACCCGCAACTCAAGCAGTGTGTCACCGCATGGATACGTGCCGAGCACCACCCCCCAGCAGACCAACTATAACTCTGTCACCACAAGCATGAACGGATACGGCTCTGCTGCCATGTCCAATTTGGGTGGTTCCCCAACTTTCCTCAACGGCTCAGCTGCCAACTCGCCCTATGCCATTGTGCCATCCAGCCCCACCATGGCCTCCTCTACAAGCCTCCCCTCCAACTGCAGCAGCTCCTCTGGCATCTTTTCCTTCTCACCAGCCAACATGGTCTCGGCCGTGAAACAGAAGAGTGCATTCGCACCTGTTGTCAGACCCCAGACCTCCCCACCTCCAACCTGCACCAGCACCAATGGGAACAGCCTGCAAGCGATATCTGGCATGATTGTTCCTCCCATGTGA

Related Sequences

XP_004836532.1 Protein

Ebf1 PREDICTED: transcription factor COE1 isoform X1 [Heterocephalus glaber]

Length: 592 aa     
>XP_004836532.1
MFGIQESIQRSGSSMKEEPLGSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGIRTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHGRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQTNYNSVTTSMNGYGSAAMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM