Details from NCBI annotation

Gene Symbol Spdl1
Gene Name spindle apparatus coiled-coil protein 1, transcript variant X3
Entrez Gene ID 101707996

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPDL1 ENSCPOG00000010816 (Guinea pig)

Gene Details

spindle apparatus coiled-coil protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009711, Guinea pig)

Protein Percentage 90.59%
CDS Percentage 90.98%
Ka/Ks Ratio 0.17022 (Ka = 0.0467, Ks = 0.2741)

SPDL1 ENSG00000040275 (Human)

Gene Details

spindle apparatus coiled-coil protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000265295, Human)

Protein Percentage 87.09%
CDS Percentage 88.41%
Ka/Ks Ratio 0.22045 (Ka = 0.0733, Ks = 0.3326)

Spdl1 ENSMUSG00000069910 (Mouse)

Gene Details

spindle apparatus coiled-coil protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000090882, Mouse)

Protein Percentage 74.83%
CDS Percentage 77.32%
Ka/Ks Ratio 0.17458 (Ka = 0.1693, Ks = 0.9695)

Spdl1 ENSRNOG00000007292 (Rat)

Gene Details

spindle apparatus coiled-coil protein 1 (Spdl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009648, Rat)

Protein Percentage 75.0%
CDS Percentage 78.02%
Ka/Ks Ratio 0.20938 (Ka = 0.1701, Ks = 0.8125)

Genome Location

Sequence Coding sequence

Length: 1821 bp    Location: 20350923..20327193   Strand: -
>XM_004836403.1
ATGGAGGCAGATATAATTGCAGATCTTCGAAGCAAGCTTAAAGAGGTTGAAAAAGAGCGATTAACAGCTGCACAGTATGGTTTACAACTGCTAGAGAGCCAGAACGAGCTGCAGAATCAATTGGATAAATATCGTAATGAAATGATGACTATGACTGAGAATTATGAACAAGAAAAATATACTCTTCAGAGAGAGGTTGAACTCAAGAGTCGAATGTTAGAAAGTTTGAACTGTGAATGTGAAGCTATTAAACAACAACAGAAAGTGCAGCTGGAGCAATTAGAAGAGCAGTTGAATAGAAGCCATGGACAAGAAATGAATGAACTAAAAAATAAGTTAGAAAAACTGAAAGTGGAGTTAGATGAAGCTAGGCTTAGTGAAAAGCAATTGAAGCGCAAAGTAGATCACCAGAAGGAACTCCTGGCACATAAGTCAGAGGAAATACGGATAATGTCTGAGCGTGTACATGAAAGCATGTCTTCGGAGATGCTGGCTCTTCAGATCGAGCTGACTGAAATGGAAAGTATGAAGACCACCCTCAAAGAAGAAGTTAATGAACTACAGTACAGACAAGAACAACTTGAAAGTCTTAGCAATAACTTAATGCACCAGGTAGACCGGCTTAAAGGAGAGAAAGAAGAGCGGGAGAAAGAAGCAGTTTCTTACTATAATGCCTTAGAGAAAGCTCGTGTAGAAAATCAAGATCTTCAGGTCCAGCTGAATCAGGCACTCCAGCAAGCCTTGGATCCCAATAGCAAAGGCAACTCTTTGTTTGCAGAGGTGGAAGATCGAAGGGCAGCAATGGAACGCCAGCTTATAAGTATGAAGGTCAAGTATCAGTCACTAAAGAAGCAGAATGCATTTAATAGAGAACAGATGCAAAGAATGAAGCTGCAGATTTCCACATTGCTACAGATGAAAGGATCTCAGACTGAATCTGAGCAGCAGGAACGGTTGTTTGCCATGTTGGAGCAGAAGAATGGTGAAATAAAACATCTTTTAGGTGAAATTAGAAATCTGGAGAAATTTAAGAATTTATATGAAAGTATGGAATCTAAGCCTTCCATGCCAGACAGTTCTGGTGTTCTAGAAGACAAAACCTTCTATACAGATTTACTTCAGCTAAAACTTGATAACTTAAACAAAGAAAATGAAAGCACCAAAGGTGAATTGTCTATACAGCGAATGAAAGCATTATTTGAGAGCCAGCGAGCCCTGGATATTGAGCGAAAACTTTTTGCAAATGAAAGATGCCTACAGCTTTCAGAAAGTGAAAATATGAAACTGAGAGCTAAACTAGATGAATTAAAGCTGAAGTATGAACCTGAAGAGAAAACTGAAGTGCCTGTACTTAAGAAGAGGCGTGAGGTGCTACCTATGGATATAACCATCCCTAAAGATGTGTGTGCCAACAATGCTGATGGGGAAGAAGTTCCTAGATTCCCACCTCAGAAAGAGAAGGCACAGTCCTGCCCTAATAATTTAGAAGATGCCAACTTGCAGTTAGAAAAACCGATTTCTACCAACACTCCCATAGCCTCTTTTTCTCCTCACAAAAATCTTCCCATGGATATACAGCTGAAGAAAGAAAAGAAATGTGTGAAGCTCATAGATGTTCCAGCTGACGCTGAGGCCTTAAGCGAAAGAAGTGGAAATACGCTTCGCTCTCCCAGGTTAGCTGCTGAAGCAAAGCTTCAGACAGAAGCCAAAGAAAGGAGAGAAACTACAAGCAAACTGGAAAAGGAATCTTGTAAGAAATCACATCCTATTCTATATGTGTCCTCCAAATCAACTCCAGAGACCCAGTGCCCTCAGCAATAA

Related Sequences

XP_004836460.1 Protein

Spdl1 PREDICTED: protein Spindly isoform X3 [Heterocephalus glaber]

Length: 606 aa      View alignments
>XP_004836460.1
MEADIIADLRSKLKEVEKERLTAAQYGLQLLESQNELQNQLDKYRNEMMTMTENYEQEKYTLQREVELKSRMLESLNCECEAIKQQQKVQLEQLEEQLNRSHGQEMNELKNKLEKLKVELDEARLSEKQLKRKVDHQKELLAHKSEEIRIMSERVHESMSSEMLALQIELTEMESMKTTLKEEVNELQYRQEQLESLSNNLMHQVDRLKGEKEEREKEAVSYYNALEKARVENQDLQVQLNQALQQALDPNSKGNSLFAEVEDRRAAMERQLISMKVKYQSLKKQNAFNREQMQRMKLQISTLLQMKGSQTESEQQERLFAMLEQKNGEIKHLLGEIRNLEKFKNLYESMESKPSMPDSSGVLEDKTFYTDLLQLKLDNLNKENESTKGELSIQRMKALFESQRALDIERKLFANERCLQLSESENMKLRAKLDELKLKYEPEEKTEVPVLKKRREVLPMDITIPKDVCANNADGEEVPRFPPQKEKAQSCPNNLEDANLQLEKPISTNTPIASFSPHKNLPMDIQLKKEKKCVKLIDVPADAEALSERSGNTLRSPRLAAEAKLQTEAKERRETTSKLEKESCKKSHPILYVSSKSTPETQCPQQ