Details from NCBI annotation

Gene Symbol Sh3pxd2b
Gene Name SH3 and PX domains 2B, transcript variant X2
Entrez Gene ID 101698402

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SH3PXD2B ENSCPOG00000020615 (Guinea pig)

Gene Details

SH3 and PX domains 2B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014949, Guinea pig)

Protein Percentage 91.73%
CDS Percentage 91.51%
Ka/Ks Ratio 0.18502 (Ka = 0.0436, Ks = 0.2356)

SH3PXD2B ENSG00000174705 (Human)

Gene Details

SH3 and PX domains 2B

External Links

Gene Match (Ensembl Protein ID: ENSP00000309714, Human)

Protein Percentage 88.44%
CDS Percentage 87.26%
Ka/Ks Ratio 0.13391 (Ka = 0.0615, Ks = 0.4596)

Sh3pxd2b ENSMUSG00000040711 (Mouse)

Gene Details

SH3 and PX domains 2B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044276, Mouse)

Protein Percentage 87.38%
CDS Percentage 84.46%
Ka/Ks Ratio 0.10438 (Ka = 0.0681, Ks = 0.652)

RGD1309926 ENSRNOG00000004063 (Rat)

Gene Details

Protein RGD1309926

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005478, Rat)

Protein Percentage 86.13%
CDS Percentage 84.08%
Ka/Ks Ratio 0.12167 (Ka = 0.0758, Ks = 0.6233)

Genome Location

Sequence Coding sequence

Length: 2727 bp    Location: 17577336..17686179   Strand: +
>XM_004836378.1
ATGTCGCCGCGGCGCAGCATCGTGGAGGTGAAAGTGCTGGACGTGCAGAAGCGGCGAGTGCCCAACAAGCATTATGTCTACATCATCCGTGTCACATGGTCCAGTGGCTCCACAGAGGCCATTTACCGGCGCTACAGCAAGTTCTTTGACCTGCAGATGCAAATGTTGGACAAATTTCCCATGGAAGGAGGACAGAAGGACCCTAAACAGCGAATCATTCCCTTTCTGCCAGGGAAAATCCTTTTCCGACGAAGCCACATCCGGGACGTGGCTGTCAAACGCCTGATACCAATTGATGAATACTGTAAGGCCCTGATCCAGCTGCCGCCCTATATCTCTCAGTGTGAGGAGGTGCTACAGTTCTTTGAGACAAGACCTGAGGACCTGAATCCCCCCAAAGAGGAACACATTGGGAAAAAGAAATCTGGTGGTGACCTGGCCTCTGTGGACCCCATGGTCCTAGAGCAGTATGTGGTGGTTGCAGACTACCAGAAGCAAGAGAGCTCGGAGATCAGCCTCAGTGTGGGACAGGTGGTAGACATCATCGAAAAAAATGAGTCAGGTTGGTGGTTCGTCAGTACTGCAGAGGAGCAAGGCTGGGTCCCTGCAACCTGCCTTGAGGGGCAGGACGGTGTCCAGGATGAGTTTTCTCTACAGCCTGAAGAAGAGGAGAAGTACACAGTCATCTACCCATACACAGCTCGTGACCAGGATGAGATGAACCTGGAGAGAGGGGCCATGGTGGAGGTCATCCAGAAAAACCTGGAAGGCTGGTGGAAGATCAGGTACCAGGGTAAGGAAGGCTGGGCCCCTGCCTCCTACCTAAAGAAGAGCAGTGGGGAGCCCTTACTTCCGAAGCTGGGCCCTGGCTTACCTGCCCACTCAGGCGCCCTTGACCTGGATGGTGTTGCCCGGCAGCAGAATGCAGTGGGCAGGGAGAAGGAGCTGCTCAACAACCAGAGGGATGGCCGGACTGAAGGCCGCCCATTGCACGAGGGCGACATTAAGCAGAGATCACCCAAGATGAGGCAGAGACCTCCTCCTCGTCGCGATATGACCATCCCTCGAGGTCTCAACCTGCCAAAGCCTCCCATCCCACCACAAGTGGAAGAAGAGTATTACACCATTGCCGAGTTCCAGACTACCATCCCAGATGGCATCAGCTTCCAGGCCGGTCTGAAGGTTGAGGTGATCGAGAAGAACTTGAGTGGCTGGTGGTACATTCAGATTGACGATAAGGAGGGATGGGCTCCGGCAACCTTCATTGACAAGTATAAGAAGACCAGCAGTGCCTCAAGACCTAATTTTCTGGCTCCCCTGCCCCACGAGGTGACTCAGCTCCGACTCAGAGACACAGCAGCAATGGAGAACAATATAGGCAGTGAAACTGTGGGTCCCTCTCGGCCCCTGCCCAGTGCACCTCATGGTGCCATGGATTCAGGGATGCCGTGGTCCAAAGATTGGAAATGTGGGAAGGAGGCCCTAAGGAAGGCATCTTCAGACACATCTGCATCAGCAGGCTATGAGGAGATCTCAGACCCTGACCTGGAAGAGAAGCCCAGCCTACCCCCAAGGAAAGAATCTATCATCAAGTCTGAAGGAGAGCTGCTGGAGAGGGAGCGGCAGAGGATGGAGCAGCTCCGGGGCTCTTCAACCAAGTCTCCTGGCATGATTTTGCCAATGATTCCAAGTAAACATGCACCCCCTGCCCGGGATAACAGGAGGCCCGAGCCCAAACCTGACAAAAGCAAATTGTTTCAACTCAAAAATGACATGGGGCTGGAGTGTGCCCACAAAGTATTGGCAAAGGAAGTGAAGAAGCCCAATCTCCGGCCCGTCTCCAAATCCAAAACTGAGCCACTGGAGGATAAGCCAGAAGCCATTCCCCAGAATCCATTCTTGAAGTCTAAACCTCAAGTTAGGCCAAAACCAGCTCCATCTCCCCGGACAGAGCCACCTCAGGGCGAAGATCAAGTGGACATCTGCAACCTCAGAAGTAAGCTCAGGCCTGCCAAGTCCCAAGAGAAATCCTTGTTGGATGGGGAGGGCCACCAGGCTGTTGGAGGCCAAGACATGGCCTTCAGCCGAAGTTTCCTCCCAGGGGAGGGACCTAGCCGTGCCCAGGACAGGTCTGGCAGACAGGATGGGCTCAGCCCAAAGGAAACATCCAGTAGACCTCCTCCAAAGGCAGCCAAGGCCACAGAGGCTGGACCTAAAAGTGTACCCGTCCCTCTCCAAGACTGTACCCATCAGAGACCTGTGGTCCCACCTCGAAGACCACCGCCCCCTAAGAAAACCTCATCATCCAGGCCCCTCCCAGAGATCAGAGGGCCACCACATGAAGCCGGTGAAATCAGGGTAGTTCCTGCCCCAGGCCGTGCCCTCCTCGTCCCTCCCAAAGCCAAACCTTTTCTCTCCAACTCTTCTAGGGGCCAAGATGACGTGCAAGGCAAAGGTGGGCTAGGGCCACGGGTAGCCGGCAAGATGGGAGAAAACAGGGAGAAAGCAACCACAAGCTCCTTCCCCAATGCCGATGGCCCAAAAGACTCTTTGTATGTGGCTGTAGCCAATTTTGAAGGAGATGAAGATACGAGCAGCTTCCAGGAAGGGACGGTATTTGAAGTCCGGGAAAAGAATACCAGCGGCTGGTGGTTCTGCCAGGTCCTTAGCGGGGCCCCTTCATGGGAAGGCTGGATTCCTTCCAACTATCTCAGAAAGAAGCCATAG

Related Sequences

XP_004836435.1 Protein

Sh3pxd2b PREDICTED: SH3 and PX domain-containing protein 2B isoform X2 [Heterocephalus glaber]

Length: 908 aa      View alignments
>XP_004836435.1
MSPRRSIVEVKVLDVQKRRVPNKHYVYIIRVTWSSGSTEAIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCEEVLQFFETRPEDLNPPKEEHIGKKKSGGDLASVDPMVLEQYVVVADYQKQESSEISLSVGQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPYTARDQDEMNLERGAMVEVIQKNLEGWWKIRYQGKEGWAPASYLKKSSGEPLLPKLGPGLPAHSGALDLDGVARQQNAVGREKELLNNQRDGRTEGRPLHEGDIKQRSPKMRQRPPPRRDMTIPRGLNLPKPPIPPQVEEEYYTIAEFQTTIPDGISFQAGLKVEVIEKNLSGWWYIQIDDKEGWAPATFIDKYKKTSSASRPNFLAPLPHEVTQLRLRDTAAMENNIGSETVGPSRPLPSAPHGAMDSGMPWSKDWKCGKEALRKASSDTSASAGYEEISDPDLEEKPSLPPRKESIIKSEGELLERERQRMEQLRGSSTKSPGMILPMIPSKHAPPARDNRRPEPKPDKSKLFQLKNDMGLECAHKVLAKEVKKPNLRPVSKSKTEPLEDKPEAIPQNPFLKSKPQVRPKPAPSPRTEPPQGEDQVDICNLRSKLRPAKSQEKSLLDGEGHQAVGGQDMAFSRSFLPGEGPSRAQDRSGRQDGLSPKETSSRPPPKAAKATEAGPKSVPVPLQDCTHQRPVVPPRRPPPPKKTSSSRPLPEIRGPPHEAGEIRVVPAPGRALLVPPKAKPFLSNSSRGQDDVQGKGGLGPRVAGKMGENREKATTSSFPNADGPKDSLYVAVANFEGDEDTSSFQEGTVFEVREKNTSGWWFCQVLSGAPSWEGWIPSNYLRKKP