Sequence details NCBI ID: XM_004836369.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Bnip1
Gene Name BCL2/adenovirus E1B 19kDa interacting protein 1, transcript variant X1
Entrez Gene ID 101724941

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BNIP1 ENSCPOG00000006752 (Guinea pig)

Gene Details

BCL2/adenovirus E1B 19kDa interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006084, Guinea pig)

Protein Percentage 97.37%
CDS Percentage 93.13%
Ka/Ks Ratio 0.06744 (Ka = 0.0155, Ks = 0.2302)

BNIP1 ENSG00000113734 (Human)

Gene Details

BCL2/adenovirus E1B 19kDa interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000231668, Human)

Protein Percentage 95.18%
CDS Percentage 90.5%
Ka/Ks Ratio 0.06422 (Ka = 0.0248, Ks = 0.3857)

Bnip1 ENSMUSG00000024191 (Mouse)

Gene Details

BCL2/adenovirus E1B interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000015725, Mouse)

Protein Percentage 94.3%
CDS Percentage 88.45%
Ka/Ks Ratio 0.06367 (Ka = 0.0318, Ks = 0.499)

Bnip1 ENSRNOG00000020753 (Rat)

Gene Details

BCL2/adenovirus E1B interacting protein 1 (Bnip1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028173, Rat)

Protein Percentage 95.18%
CDS Percentage 89.18%
Ka/Ks Ratio 0.06025 (Ka = 0.0276, Ks = 0.4585)

Genome Location

Sequence Coding sequence

Length: 687 bp    Location: 16941661..16925294   Strand: -
Raw sequence   
>XM_004836369.1
ATGGCGGCTCCCCAAGATGTCCACGTCCGAATCTGTAACCAAGAGATTGTCAAATTCGACCTGGAGGTGAAGGCACTTATCCAGGATATTCGAAACTGTTCAGGACCCTTAAGCACACTTACAGAACTGAATACTAATGTGAAAGAGAAGTTTCAACAGTTACGACACAGAATACAGGAGCTTGAGCAGTTGGCTAAGGAGCAAGACAAAGAGTCAGAGAAATACCTTCTACTCCAGGAAGTGGAAAATCACAAAAAGCAGATGCTCAGCAACCAGACCTCATGGAGGAAAGCCAATCTCACTTGCAAAATTGCAATTGACAATCTAGAGAAAGCAGAGCTTCTCCAGGGAGGAGACCCCTTACGGCAAAGGAAAACTACCAAAGAAAGCCTGGCCCAGACGTCCAGCGCGATCACAGAGAGCCTTATGGGGATCAGCAGGATGATGTCGCAGCAGGTCCAGCAGAGTGAGGAGGCTATGCAGACTCTAGTCAACTCTTCACGAACTATCCTGGATGCAAATGAAGAATTTAAGTCCATGTCGGGTACCATCCAGCTGGGCCGGAAGCTGATCACAAAGTACAACCGCCGAGAACTGACGGACAAGCTTCTTATCTTTCTCGCCCTGGCCCTTTTTCTTGCTACTGTCCTCTATATTGTGAAAAAGCGCCTCTTTCCATTTTTGTAA

Related Sequences

XP_004836426.1 Protein

Bnip1 PREDICTED: vesicle transport protein SEC20 isoform X1 [Heterocephalus glaber]

Length: 228 aa      View alignments
>XP_004836426.1
MAAPQDVHVRICNQEIVKFDLEVKALIQDIRNCSGPLSTLTELNTNVKEKFQQLRHRIQELEQLAKEQDKESEKYLLLQEVENHKKQMLSNQTSWRKANLTCKIAIDNLEKAELLQGGDPLRQRKTTKESLAQTSSAITESLMGISRMMSQQVQQSEEAMQTLVNSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL