Sequence details NCBI ID: XM_004836368.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nkx2-5
Gene Name NK2 homeobox 5, transcript variant X1
Entrez Gene ID 101724475

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NKX2-5 ENSCPOG00000026347 (Guinea pig)

Gene Details

NK2 homeobox 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016269, Guinea pig)

Protein Percentage 92.15%
CDS Percentage 89.42%
Ka/Ks Ratio 0.07226 (Ka = 0.0455, Ks = 0.6292)

NKX2-5 ENSG00000183072 (Human)

Gene Details

NK2 homeobox 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000327758, Human)

Protein Percentage 92.55%
CDS Percentage 90.06%
Ka/Ks Ratio 0.059 (Ka = 0.034, Ks = 0.576)

Nkx2-5 ENSMUSG00000015579 (Mouse)

Gene Details

NK2 transcription factor related, locus 5 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000015723, Mouse)

Protein Percentage 90.22%
CDS Percentage 86.44%
Ka/Ks Ratio 0.04387 (Ka = 0.0442, Ks = 1.0081)

Nkx2-5 ENSRNOG00000020747 (Rat)

Gene Details

NK2 homeobox 5 (Nkx2-5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028155, Rat)

Protein Percentage 91.51%
CDS Percentage 87.53%
Ka/Ks Ratio 0.04342 (Ka = 0.0383, Ks = 0.8819)

Genome Location

Sequence Coding sequence

Length: 975 bp    Location: 16881191..16884210   Strand: +
Raw sequence   
>XM_004836368.1
ATGTTCCCCAGCCCTGCGCTCACGCCCACGCCGTTCTCGGTCAAAGACATCTTGAACCTGGAACAGCAGCAGCGCAGCCTGGCCGCCGGGGAGCTCTCCGCGCGCCTGGAGGCCACCCTGGCGCCCGCCTCCTGCATGCTGGCCGCCTTCAAGCCGGAGGCCTACTCAGCGCCGCCCGAGGCGGCGGCGCCAGGCCTCCCGGAGCTGCGCGCCGAGCTGGGCCCCTCGCCTTCGCCCTCCAAGTGCGCTCCTGCCTTCCCCGCCGCCCCCGCCTTCTATCCCCGGGCCTACGGCGACCCAGACCACGCTAAGGACCCTAGAACGGATAAGGATGAGCTGTGCGCGCTGCAGAAGGCGGTAGAGCTGGAGAAGCCAGAGGCGGACAGCGCGGAGCGGCCCCGCGCGCGCCGGCGGAGGAAGCCGCGGGTGCTCTTCTCGCAGGCGCAGGTCTACGAGCTCGAGCGGCGCTTCAAGCAACAGCGGTACCTATCGGCTCCCGAGCGCGACCAGCTGGCCAGCGTGCTGAAGCTGACGTCCACGCAGGTCAAGATCTGGTTCCAGAACCGGCGCTACAAGTGCAAGCGGCAGCGGCAGGACCAGACTCTGGAGCTGGTGGGGCTGCCCCCGCCGCCGCCGCCGCCGCCTGCCCGCAGGATCGCGGTGCCGGTGCTGGTGCGCGACGGCAAGCCGTGCTTGGGGGACTCGGCACCCTACGCACCTGCCTACGGCGTGGGCCTCAACGCCTACGGTTATAATGCCTATCCCGCCTACCCCGGCTACGGAGGCGCGGCCTGCAGCCCTGGCTACAGCTGCGCCGCCGCCTACCCGGCTGGGCCTCCTGCGGCTCAGGCGGCCTCGGCTGCCGCCAACAACTTCGTGAACTTCAGCGTCGGGGACTTGAACGCTGTGCAGAGCCCCGGGATTCCGCAGGGTAACTCGGGAGCGTCCACGTTACACGGCATCCGAGCCTGGTAG

Related Sequences

XP_004836425.1 Protein

Nkx2-5 PREDICTED: homeobox protein Nkx-2.5 isoform X1 [Heterocephalus glaber]

Length: 324 aa      View alignments
>XP_004836425.1
MFPSPALTPTPFSVKDILNLEQQQRSLAAGELSARLEATLAPASCMLAAFKPEAYSAPPEAAAPGLPELRAELGPSPSPSKCAPAFPAAPAFYPRAYGDPDHAKDPRTDKDELCALQKAVELEKPEADSAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPPARRIAVPVLVRDGKPCLGDSAPYAPAYGVGLNAYGYNAYPAYPGYGGAACSPGYSCAAAYPAGPPAAQAASAAANNFVNFSVGDLNAVQSPGIPQGNSGASTLHGIRAW