Details from NCBI annotation

Gene Symbol Tspan17
Gene Name tetraspanin 17, transcript variant X4
Entrez Gene ID 101707756

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSPAN17 ENSCPOG00000027369 (Guinea pig)

Gene Details

tetraspanin 17

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019846, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 94.57%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2757)

TSPAN17 ENSG00000048140 (Human)

Gene Details

tetraspanin 17

External Links

Gene Match (Ensembl Protein ID: ENSP00000309036, Human)

Protein Percentage 98.89%
CDS Percentage 94.2%
Ka/Ks Ratio 0.01547 (Ka = 0.0049, Ks = 0.3169)

Tspan17 ENSMUSG00000025875 (Mouse)

Gene Details

tetraspanin 17

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026993, Mouse)

Protein Percentage 95.93%
CDS Percentage 90.37%
Ka/Ks Ratio 0.03204 (Ka = 0.0182, Ks = 0.5692)

Tspan17 ENSRNOG00000018122 (Rat)

Gene Details

tetraspanin 17 (Tspan17), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049736, Rat)

Protein Percentage 94.44%
CDS Percentage 90.25%
Ka/Ks Ratio 0.05165 (Ka = 0.0254, Ks = 0.4913)

Genome Location

Sequence Coding sequence

Length: 813 bp    Location: 13476296..13466005   Strand: -
>XM_004836322.1
ATGCCTGGCAAGCACCAGCATTTCCAGGAACCAGAGGTCGGCTGCTGCGGGAAATACTTCCTGTTTGGCTTCAACATTGTCTTCTGGGTGCTGGGAGGCCTGTTCCTAGCCATCGGCCTCTGGGCCTGGAGTGAGAAGGGTGTTCTTTCCAACATATCGGCACTGACAGATCTGGGAGGCCTTGACCCTGTGTGGCTGTTTGTGGTGGTTGGAGGCGTCATGTCGGTGCTGGGCTTTGCTGGGTGTATCGGAGCCCTCCGGGAGAACACCTTCCTGCTTAAGTTTTTCTCCGTGTTCCTTGGCCTCATCTTCTTCCTGGAGCTGGCGACAGGGATCCTGGCCTTCGTCTTCAAGGACTGGATTAGAGACCAGCTCAACCTTTTCATCAACAACAACGTCAAGGCCTACCGGGATGACATTGACCTCCAGAACCTCATTGACTTTGCTCAGGAATATTGGTCTTGCTGTGGAGCCCGCGGGCCCAATGACTGGAACCTCAATATCTACTTCAACTGCACTGACTTGAACCCCAGCCGGGAGCGCTGTGGAGTGCCCTTCTCCTGCTGCGTTAGGGACCCTGCGGAAGATGTCCTCAATACCCAGTGTGGCTATGATGTCCGGCTCAAGCTGGAGCTGGAGCAGCAGGGCTTCATCCACACCAAAGGCTGCGTGGGCCAGTTTGAGAAGTGGCTGCAGGACAACCTGATCGTTGTGGCCGGGGTCTTCGTGGGCATTGCCCTACTTCAGATCTTTGGCATCTGCCTGGCCCAGAACCTCGTGAGTGACATCAAGGCAGTGAAGGCCAACTGGTGA

Related Sequences

XP_004836379.1 Protein

Tspan17 PREDICTED: tetraspanin-17 isoform X4 [Heterocephalus glaber]

Length: 270 aa      View alignments
>XP_004836379.1
MPGKHQHFQEPEVGCCGKYFLFGFNIVFWVLGGLFLAIGLWAWSEKGVLSNISALTDLGGLDPVWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQLNLFINNNVKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLNTQCGYDVRLKLELEQQGFIHTKGCVGQFEKWLQDNLIVVAGVFVGIALLQIFGICLAQNLVSDIKAVKANW