Details from NCBI annotation

Gene Symbol Pdlim7
Gene Name PDZ and LIM domain 7 (enigma), transcript variant X4
Entrez Gene ID 101715491

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDLIM7 ENSCPOG00000002356 (Guinea pig)

Gene Details

PDZ and LIM domain 7 (enigma)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002141, Guinea pig)

Protein Percentage 96.27%
CDS Percentage 94.81%
Ka/Ks Ratio 0.08976 (Ka = 0.0169, Ks = 0.1887)

PDLIM7 ENSG00000196923 (Human)

Gene Details

PDZ and LIM domain 7 (enigma)

External Links

Gene Match (Ensembl Protein ID: ENSP00000348099, Human)

Protein Percentage 95.61%
CDS Percentage 90.79%
Ka/Ks Ratio 0.05067 (Ka = 0.0232, Ks = 0.457)

Pdlim7 ENSMUSG00000021493 (Mouse)

Gene Details

PDZ and LIM domain 7

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047173, Mouse)

Protein Percentage 93.86%
CDS Percentage 90.28%
Ka/Ks Ratio 0.07215 (Ka = 0.0303, Ks = 0.4199)

Pdlim7 ENSRNOG00000013653 (Rat)

Gene Details

PDZ and LIM domain 7 (Pdlim7), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018899, Rat)

Protein Percentage 94.52%
CDS Percentage 89.33%
Ka/Ks Ratio 0.0571 (Ka = 0.0283, Ks = 0.4958)

Genome Location

Sequence Coding sequence

Length: 1371 bp    Location: 12591900..12607992   Strand: +
>XM_004836239.1
ATGGATTCCTTCAAAGTAGTGCTGGAGGGGCCAGCACCTTGGGGCTTCCGGCTGCAAGGGGGCAAGGACTTCAATGTGCCCCTCTCAATCTCCCGGCTCACTCCTGGAGGCAAAGCTGCGCAGGCTGGCGTGGCAGTGGGCGACTGGGTGCTGAGCATCGATGGCGAGAACGCCGGGAGCCTCACGCACATTGAAGCCCAGAACAAGATCCGTGCCTGTGGGGAGCGCCTTAGCCTGGGACTCAGCAGGCCTCAGCCAGTTCAGAGCAAACCGCAGAAGGCTCTGGCCCCTGCCGCGGACCCCCCGCGGTACACCTTTGCACCCAGCGCCTCCCTCAACAAGACGGCCCGGCCCTTTGGGGCACCCCTGCCTGCTGACAGCGCCCCGCAGCAGAATGGACAGCCGCTTCGACTGCTGGTCCCCGATGCCAGCAAGCAGCGGCTGATGGAGAATACCGAGGACTGGCGGCCACGGCCTGGGACAGGCCAGTCCCGCTCCTTCCGCATCCTTGCCCACCTCACAGGCACCGAGTTCATGCAAGACCCGGATGAGGAACATCTGAAGAAATCAAGCCAGGTGCCCAGGACAGAAGCCCCAGCCCCAGCCTCAGCGACACCCCAGGATCCCTGGCCTGGCCCCACCAGCCCCAGCCCCACCAGCCGCCCACCCTGGGCTGTGGACCCTGCATTTGCTGAGCGCTATGCCCCGGACAAAATAAGCACGGTGCTGACCCGGCACAGCCAGCCAGCCACACCCACACCTCTACAGAACCGCACCTCCATCGTCCAGGCCGCTGCCGGAGCGGGCGCTGGAGGACCCAACAACGGCAAGACTCCCGTCTGCCACCAGTGCCACAAGGTCATCCGGGGCCGATACCTGGTGGCACTGGGCCATGCATACCACCCAGAGGAGTTTGTGTGCAGCCAGTGTGGAAAGATCCTGGAGGAGGGTGGCTTCTTTGAGGAGAAAGGGGCTATCTTTTGTCCCTCCTGCTATGATGTGCGCTATGCACCCAGCTGTGCCAAGTGCAAGAAGAAGATCACAGGCGAGATCATGCATGCCCTGAAGATGACCTGGCACGTGCACTGCTTCACCTGTGCTGCCTGCAAGACACCCATTCGCAACAGGGCCTTCTACATGGAGGAAGGGGCACCCTACTGCGACCGAGACTATGAGAAGATGTTTGGCACAAAATGCCGAGGTTGTGACTTCAAGATTGATGCTGGGGACCGCTTCCTGGAAGCACTGGGCTTCAGCTGGCATGATACGTGCTTTGTTTGTGCGATATGTCAGATCAATCTGGAAGGAAAGACCTTCTATTCCAAGAAGGACAAGCCCCTTTGCAAGAGCCATGCTTTCTCCCACGTGTGA

Related Sequences

XP_004836296.1 Protein

Pdlim7 PREDICTED: PDZ and LIM domain protein 7 isoform X4 [Heterocephalus glaber]

Length: 456 aa      View alignments
>XP_004836296.1
MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRPQPVQSKPQKALAPAADPPRYTFAPSASLNKTARPFGAPLPADSAPQQNGQPLRLLVPDASKQRLMENTEDWRPRPGTGQSRSFRILAHLTGTEFMQDPDEEHLKKSSQVPRTEAPAPASATPQDPWPGPTSPSPTSRPPWAVDPAFAERYAPDKISTVLTRHSQPATPTPLQNRTSIVQAAAGAGAGGPNNGKTPVCHQCHKVIRGRYLVALGHAYHPEEFVCSQCGKILEEGGFFEEKGAIFCPSCYDVRYAPSCAKCKKKITGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCDRDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDKPLCKSHAFSHV