Details from NCBI annotation

Gene Symbol Pcbd2
Gene Name pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2, transcript variant X2
Entrez Gene ID 101709065

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCBD2 ENSCPOG00000004136 (Guinea pig)

Gene Details

pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003732, Guinea pig)

Protein Percentage 82.95%
CDS Percentage 88.37%
Ka/Ks Ratio 0.32619 (Ka = 0.0846, Ks = 0.2592)

PCBD2 ENSG00000132570 (Human)

Gene Details

pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000421544, Human)

Protein Percentage 76.15%
CDS Percentage 86.92%
Ka/Ks Ratio 0.85658 (Ka = 0.1406, Ks = 0.1641)

Pcbd2 ENSMUSG00000021496 (Mouse)

Gene Details

pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021958, Mouse)

Protein Percentage 73.85%
CDS Percentage 76.41%
Ka/Ks Ratio 0.21558 (Ka = 0.1746, Ks = 0.8097)

Pcbd2 ENSRNOG00000047796 (Rat)

Gene Details

Protein Pcbd2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067457, Rat)

Protein Percentage 74.8%
CDS Percentage 77.95%
Ka/Ks Ratio 0.1672 (Ka = 0.142, Ks = 0.8491)

Genome Location

Sequence Coding sequence

Length: 393 bp    Location: 12162222..12113915   Strand: -
>XM_004836220.1
ATGGCGGCGGCTCTCGGGGCGCGCGGGGCGAGGCTGAGCTCCCTGGTGGCGCTGCGGGGCGGGCGCCGGGGCCTAGCGGCCAAGTCCTCAGATTCTCAGCTGTTGACTGCAGAGGAGAGGAACCAAATTCTACTTGAGCTTAAGAAAGCAGGATGGTCAGAATTAAGTGAGAAAGATGCCATCTACAAAGAATTCTCCTTCAAAAATTTTAATCAGGCTTTTGGCTTTATGTCCCGAGTTGCCCTACAAGCAGAGAAGATAAATCATCACCCGGAATGGTTCAATGTATACAACAAGGTCCAAATAACTCTCACATCACATGACTATGGTGGACTGACCAGAAGAGATGTGCAGCTGGCGAGATTTATTGAAAAAGCATCTGTTTTTGTGTGA

Related Sequences

XP_004836277.1 Protein

Pcbd2 PREDICTED: pterin-4-alpha-carbinolamine dehydratase 2 isoform X2 [Heterocephalus glaber]

Length: 130 aa      View alignments
>XP_004836277.1
MAAALGARGARLSSLVALRGGRRGLAAKSSDSQLLTAEERNQILLELKKAGWSELSEKDAIYKEFSFKNFNQAFGFMSRVALQAEKINHHPEWFNVYNKVQITLTSHDYGGLTRRDVQLARFIEKASVFV