Sequence details NCBI ID: XM_004836199.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Trpc7
Gene Name transient receptor potential cation channel, subfamily C, member 7
Entrez Gene ID 101701658

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRPC7 ENSCPOG00000004430 (Guinea pig)

Gene Details

transient receptor potential cation channel, subfamily C, member 7

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003998, Guinea pig)

Protein Percentage 98.94%
CDS Percentage 94.76%
Ka/Ks Ratio 0.03212 (Ka = 0.007, Ks = 0.2189)

TRPC7 ENSG00000069018 (Human)

Gene Details

transient receptor potential cation channel, subfamily C, member 7

External Links

Gene Match (Ensembl Protein ID: ENSP00000426070, Human)

Protein Percentage 98.59%
CDS Percentage 93.2%
Ka/Ks Ratio 0.02743 (Ka = 0.0085, Ks = 0.309)

Trpc7 ENSMUSG00000021541 (Mouse)

Gene Details

transient receptor potential cation channel, subfamily C, member 7

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022023, Mouse)

Protein Percentage 98.12%
CDS Percentage 90.11%
Ka/Ks Ratio 0.0213 (Ka = 0.0112, Ks = 0.5247)

Trpc7 ENSRNOG00000012727 (Rat)

Gene Details

transient receptor potential cation channel, subfamily C, member 7 (Trpc7), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016982, Rat)

Protein Percentage 98.48%
CDS Percentage 89.88%
Ka/Ks Ratio 0.01678 (Ka = 0.0095, Ks = 0.5671)

Genome Location

Sequence Coding sequence

Length: 2565 bp    Location: 10710936..10900054   Strand: +
Raw sequence   
>XM_004836199.1
ATGCAGCGCCGGCACACGACTTTAAGAGAGAAGGGCCGCCGCCAGGCCATCCGGGGCCCGGCCTACATGTTCAACGAGAAGGGCACTAGCCTGACTCCCGAAGAAGAGCGCTTCCTGGACTCAGCTGAGTATGGCAACATCCCAGTGGTCAGGAAAATGCTGGAGGAATCCAAAACCCTCAACTTCAACTGCGTGGACTACATGGGGCAGAACGCGTTGCAGCTGGCTGTGGGCAATGAACACCTGGAGGTCACAGAGCTGCTGCTCAAGAAAGAGAACCTGGCGCGGGTGGGGGACGCGCTGCTGCTGGCCATCAGCAAGGGCTACGTGCGCATCGTGGAAGCCATCCTCAACCACCCGGCCTTTGCGCAGGGCCAGCGCCTGACGCTCAGCCCGCTGGAGCAGGAGCTGCGAGATGACGATTTCTACGCCTATGACGAGGATGGCACACGCTTCTCCCATGATATCACCCCCATCATCCTGGCAGCCCACTGTCAGGAGTATGAGATCGTGCACATCCTGCTGCTCAAGGGTGCCCGCATAGAGAGGCCCCATGATTACTTCTGCAAGTGCACTGAGTGCACGGAGAAGCAGCGGAAAGACTCCTTCAGCCACTCACGCTCCCGCATGAATGCCTACAAAGGACTGGCAAGCGCTGCTTACCTGTCCCTGTCCAGCGAAGACCCTGTCCTCACCGCACTGGAGCTAAGCAACGAGTTAGCCAGACTAGCCAACATTGAGACTGAATTCAAGAATGATTACAGGAAGTTATCTATGCAATGCAAGGATTTTGTGGTGGGCGTGCTGGACCTGTGCCGAGACACAGAAGAAGTGGAAGCGATTTTAAATGGTGATGTGAACTTCCAAGTCTGGTCCGACCACCACCGTCCGAGTCTGAGCCGGATCAAACTCGCCATTAAATACGAAGTCAAGAAGTTCGTTGCTCATCCTAACTGTCAGCAGCAATTGCTTACCATGTGGTATGAAAATCTCTCAGGCTTACGTCAACAGTCTATCGCTGTGAAATTCCTGGCTGTCTTTGGAGTCTCCATAGGCCTCCCTTTTCTCGCCATAGCCTATTGGATTGCTCCGTGCAGCAAGCTAGGACGAACATTGAGGAGCCCTTTCATGAAGTTTGTAGCCCATGCAGTTTCTTTTACTATCTTCTTGGGATTATTAGTCGTGAATGCATCTGACAGATTTGAAGGTGTTAAAACCCTGCCCAATGAAACCTTCACAGACTACCCAAAGCAGATCTTCAGAGTGAAAACCACACAGTTCTCATGGACAGAAATGCTCATCATGAAGTGGGTCTTAGGAATGATCTGGTCTGAATGCAAAGAAATCTGGGAGGAGGGGCCACGGGAGTATGTGCTGCACCTGTGGAACCTACTGGATTTTGGAATGCTCTCCATCTTTGTGGCCTCCTTCACTGCGAGGTTCATGGCCTTCCTGAAGGCCAGCGAGGCCCAGATGTACGTGGATCAGTACGTGCAGGACAACACGCTGCACAACGTCTCGCTTCCGCCGGAAGTGGCTTACTTCACCTACGCCAGGGACAAGTGGTGGCCTTCAGACCCTCAGATCATATCAGAAGGGCTATATGCAATAGCAGTCGTGCTGAGCTTCTCTCGCATTGCATACATCCTGCCAGCCAATGAGAGTTTTGGGCCCCTGCAGATCTCCCTGGGGAGAACTGTGAAAGATATCTTCAAGTTCATGGTCATTTTCATCATGGTATTTGTGGCTTTCATGATTGGGATGTTCAACCTGTACTCTTACTACAGAGGTGCGAAGTACAACCCAGCGTTTACAACAGTTGAAGAAAGTTTTAAAACCTTATTTTGGTCCATATTCGGCTTATCTGAAGTGATCTCGGTGGTGCTGAAATATGACCATAAATTCATCGAGAACATTGGCTATGTTCTCTATGGCGTTTATAACGTCACCATGGTGGTAGTGCTGCTCAACATGCTAATAGCCATGATTAACAACTCCTATCAGGAAATCGAGGAGGATGCAGATGTGGAGTGGAAATTCGCCCGAGCAAAACTCTGGCTGTCTTATTTTGATGAAGGAAGAACTCTACCTGCTCCTTTTAATCTAGTGCCAAGTCCTAAATCATTTTATTATCTCATAATGAGAATCAAGATGTGCCTCATAAAACTCTGCAAATCTAAAGCCAAAAGCTGTGAAAATGACCTTGAAATGGGCATGCTGAATTCCAAATTCAGGGTAGGTAGCATCTGGTTTGCTGGCATGAGAAATTCTGAAAACCTGACTGCAAACAACACTTTCAGCAAGCCCACCAGATACCAGAAAATCATGAAACGGCTCATAAAAAGATATGTGCTGAAGGCCCAAGTAGACAGAGAAAACGATGAAGTCAATGAAGGGGAGCTGAAGGAAATCAAGCAAGATATCTCCAGCCTGCGCTATGAGCTTCTGGAAGAGAAATCCCAAGCTACAGGGGAGCTGGCAGACCTGATCCAACAGCTCAGTGAGAAATTTGGAAAGAACTTAAACAAAGACCACCTGAGGGTGAATAAGGGCAAAGACATTTAG

Related Sequences

XP_004836256.1 Protein

Trpc7 PREDICTED: short transient receptor potential channel 7 [Heterocephalus glaber]

Length: 854 aa      View alignments
>XP_004836256.1
MQRRHTTLREKGRRQAIRGPAYMFNEKGTSLTPEEERFLDSAEYGNIPVVRKMLEESKTLNFNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARVGDALLLAISKGYVRIVEAILNHPAFAQGQRLTLSPLEQELRDDDFYAYDEDGTRFSHDITPIILAAHCQEYEIVHILLLKGARIERPHDYFCKCTECTEKQRKDSFSHSRSRMNAYKGLASAAYLSLSSEDPVLTALELSNELARLANIETEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVNFQVWSDHHRPSLSRIKLAIKYEVKKFVAHPNCQQQLLTMWYENLSGLRQQSIAVKFLAVFGVSIGLPFLAIAYWIAPCSKLGRTLRSPFMKFVAHAVSFTIFLGLLVVNASDRFEGVKTLPNETFTDYPKQIFRVKTTQFSWTEMLIMKWVLGMIWSECKEIWEEGPREYVLHLWNLLDFGMLSIFVASFTARFMAFLKASEAQMYVDQYVQDNTLHNVSLPPEVAYFTYARDKWWPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYRGAKYNPAFTTVEESFKTLFWSIFGLSEVISVVLKYDHKFIENIGYVLYGVYNVTMVVVLLNMLIAMINNSYQEIEEDADVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYLIMRIKMCLIKLCKSKAKSCENDLEMGMLNSKFRVGSIWFAGMRNSENLTANNTFSKPTRYQKIMKRLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGELADLIQQLSEKFGKNLNKDHLRVNKGKDI