Details from NCBI annotation

Gene Symbol Lct
Gene Name lactase
Entrez Gene ID 101697396

Database interlinks

Part of NW_004624732.1 (Scaffold)

For more information consult the page for NW_004624732.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LCT ENSCPOG00000004599 (Guinea pig)

Gene Details

lactase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004145, Guinea pig)

Protein Percentage 83.96%
CDS Percentage 86.22%
Ka/Ks Ratio 0.24518 (Ka = 0.0927, Ks = 0.3779)

LCT ENSG00000115850 (Human)

Gene Details

lactase

External Links

Gene Match (Ensembl Protein ID: ENSP00000264162, Human)

Protein Percentage 85.08%
CDS Percentage 85.74%
Ka/Ks Ratio 0.22566 (Ka = 0.0924, Ks = 0.4094)

Lct ENSMUSG00000026354 (Mouse)

Gene Details

lactase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073190, Mouse)

Protein Percentage 79.31%
CDS Percentage 79.56%
Ka/Ks Ratio 0.18066 (Ka = 0.1332, Ks = 0.7375)

Lct ENSRNOG00000003681 (Rat)

Gene Details

lactase (Lct), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004908, Rat)

Protein Percentage 78.52%
CDS Percentage 79.25%
Ka/Ks Ratio 0.17636 (Ka = 0.1343, Ks = 0.7616)

Genome Location

Sequence Coding sequence

Length: 5784 bp    Location: 35175062..35125287   Strand: -
>XM_004836114.1
ATGGAACCATCTTGGAAAGTGGCCCTCATTATTCTCCTGAGTTTTTCATGCCAGGGGTCAGACTGGGAATCTGATAGAAATTTCATTTCAGCAGCTGGTCCTCTAACCAGTGACTTACTGCACAACCTGAGCCACCTACTGGGAAACCAGAGTTCTCATTTTGTAGCTGGGTACAAGGACATTTATACTTGCCACCAGCCACTGCCTTCTTTCATACCAGAGTACTTCAAAAGTCTTCATAACAGTAAGATCACCCACTATAAAGTATTTCTATCATGGGCACAACTTCTCCCATCAGGAAGCTCCAGGAATCCAGATGGGAAAACGCTGCAGTGCTACCGGCAACTCCTTGAGGCCCTCAAGACTGCACAGCTTCAGCCCATGGTCATCCTGCATCACCAGACCCTCCCCACAAGCACTCTCCAGAGAAGCAGAGTCTTTGCTGACCTCTTTGCTGACTATGCCACATTCGCCTTCCACTCCTTTGGGGACCTAGTTGGAATCTGGTTCACCTTTAGTGACTTAAAGGGGACGATGATGGGTCTTTCCCACAAGGAATCAAGAGCTTCTCATCTCCAAACCCTCACTGATGCCCACAGAAAAGTCTATGAGATTTACCATGCAAAATATGCTTCTCAGGGTGGAAAGCTCTCTGTGGTCCTCCCCTCAGACGATCTCTTGGAGGCCCTGCTGGAACCATCTGTGTCTGCACTTGCCAAGGATTCAGTTGATTTCCTCTCTCTTGATTTGTCTTATGAATGCCAAAGTGAGGCAAGTCTACCAGAGAAGCTGAATAAATTGCAGAGCATTGAGCCAAAAGTGAAAGTTTTCATCTTTACTCTAAAACTTCAAGATTGTCCCTCTACCAAAAAGAACCCTGCCAGGATGCTCTTCAGCCTTTTTGAAGCCATAAATAAAGACCACGTATGCACCATTGGGTTTGATGTCAATGAATTCCTGAGCTGTTCAAGTTCCAAGAAAAGCATGTCTTGCTCTCTGACTGATAGCCTGGCCCTTCAGAGTGACCAGCAACAGGACCGTGACACAGCGGGTGGGCCCTTGTCCCCTGACTCAGCCTATTGGAGGGTCTGGGAAGCCTTTGCTAACCAGTCCAGGACAGAAAGGGATGCCTTCCTGCAGGATGTCTTCCCTGAAGACTTCCTCTGGGGTGTCTCCACAGGAGCCTTTAATGTGGAAGGCGGCTGGGCTGAGGGTGGAAGAGGGGCCAGCATCTGGGACCAATATGGACTGAATGGCACCAGAGGCCAAGCAACCCCGGAGGTGGCTAGTGACAGTTACCATAAGTCAGCCTCTGACGTCGCCCTGCTTCGTGGGCTCCGGGCTCAGGTGTACAAGTTCTCCATCTCCTGGTCCCGGATCTTCCCCACTGGGCACAGGAGCAGCCCCAACCTCCAAGGTGTCACTTACTACAACAAGCTGATCGACACCCTGCTGGGATCGCACATCAAGCCCATGGTGACACTGTTCCACTGGGACCTGCCTCAGGCCTTGCAGGACCTTGGCGGTTGGCAGAATGAGAACGTGGTGGATGCCTTTCTGGACTATGCAGCCTTTTGCTTCTCTACTTTTGGGGACCGTGTGAAACTGTGGGTGACCTTCCATGAGCCATGGGTGGTGAGCTACGCAGGCTATGGCACCGGCCAGCACGCGCCAGGCATTTCTGACCCTGGAGTGGCCTCTTTTAAGGTGGCTCACTTGATCCTCAAAGCTCATGCCAGAACTTGGCACCACTACAACAGTCACCATCGCGCCCAGCAGCAGGGGAGTGTGGGCATCGTGCTGAACTCAGACTGGGCAGAGCCTTTGTCTCCAGAGCAACCTGAAGACCTCACAGCCTCTGAGCGCTTCTTGCACTTCATGCTGGGCTGGTTTGCACACCCCATCTTTGTAGATGGAGGCTACCCTCCTACCATGAAGGCTCAGATTCAACAGCTAAACAAACAGTGCTCTGGTCCTGTGGCCCAGCTCCCAGAGTTCACTAGGGCAGAGAAGCAGCTCATAAAGGGCTCTGCTGACTTTCTGGGTCTGTCTCACTACACCTCCCGCCTCATCAGGAAGGGCCAACAAGATACCTGCGTCCCTAGCTATGAAAATATAGGAGGCTTCTCCCAACACGTGGATCCTGCATGGCCCCAAACTGCTTCTCCTTGGATTCGCGTGGTGCCCTGGGGTATAAGAAGGCTGTTGCAATTTGTTTCCATGGAGTACACAAGGGGAAAAGTTCCCATCTACCTGGCTGGGAATGGCATGCCCATAGGGGAAAATAACAGTCTCTTTGACGACTCCTCAAGAGTGGCCTACTTCAACCAGTACATCAATGAGGTGCTGAAAGCTGTCAAGGAGGACTCCGTGGATGTTCGCTCTTATATTGCTCGGTCTCTCATTGACGGCTTCGAAGGCCCCTCTGGTTACAGCCAGAGATTTGGGCTTCACCACGTCAACTTCAGTGACAGCAGCAAGCCAAGGACTCCCAGGAAATCTGCCTGCTTTTTCACCACCATCATTGAAAAGAATGGTTTTACCACTAAGGTAGTAAAAAGATCACTACCATCCAAAGTAGCAGAGCTCCCCTCCAAAATCAGAACCTTCAATTTTCCATCTGAGGTGCCCTCTAAGGCTAAAGTAGTTTGGGAAAAGTTCTCCAACCAACCCAAGTTTGAGAGAGACTTTTTCTACCATGGCACATTCCGGGATGACTTTCTGTGGGGCGTGTCCTCGTCGGCCTATCAAATCGAAGGGGCTTGGGACGCTGAAGGCAAAGGCCCCAGCATTTGGGATAACTTCACACACACACCAGGGAATGCAGTGAAAGACAATGCCACTGGAGACATAGCCTGTGACAGTTATAACAACCTGGATGCTGATCTGAATATACTTCGAGCTCTGAAGGTGAAGGCCTATCGCTTCTCTATGGCCTGGTCTCGGATTTTCCCTGATGGGACCAACAGTTTTATCAACAGAGCTGGTGTTGAATATTACAACAGACTGATCAGTGGCTTGGTGGCAAGCAACATCTTGCCCATGGTGACACTGTTTCACTGGGACTTGCCCCAAGCCCTTCAGGATATTGGAGGTTGGGAAAATCCTTCCTTGATTGAGTTGTTTGACAGCTACGCAGACTTCTGTTTCCAGACCTTTGGTGACAGAGTTAAGTTTTGGATGACCTTTAATGAGCCTGCAATACAGGCATGGAATGGTTATGGCTTGGGGAATTTCCCCCCAAATGTGAAGGACCCAGGCTGGGGCCCTTACAGGATCGGTCATGCAGTCATCAAAGCCCATGCCAGAGTCTACCACACTTATGATGAGAAGTACAGGCAGCAGCAGCAGGGAGTCATCTCGTTGAGCCTCAGCACACACTGGGCAGAGCCCAAGTCTCCAGGGGTCCCGAGAGATGTAGAAGCAGCTGACCGAATGCTGCAATTCAGCTTGGGCTGGTTTGCCCACCCCATTTTCAGAAATGGAGACTATCCCGATGTCATGAAGTGGAAAGTGGGGAACAGGAGCGAGCTACAGCACCTGGCCACCTCCCGCCTGCCAAGTTTCACTGAGGAGGAGAAGCGGTACATTAGAGGTACAGCCGACGTCTTCTGCTTCAACACCTACTCATCTAGACTTGTGCAGCACACAACACCTCCGCTGAATCCACCTTCCTACCAGTATGACCAGGAGATCACTGAGGAAGAGGACCCTTCGTGGGTTGCCACAGCAATAAACAGAGCTGCACCCTGGGGGATACGCAGACTGCTGAACTGGATCAAGGAAGAGTATGGTGATGTCCCCATTTACATCACCGAGAATGGAGTGGGGCTGACAAGTGGAGCGCTGCAAGATACTGACAGGATATTTTACCACAAAACCTACATCAATGAAGCTTTGAAAGCCTACAGGCTCGATGGCATAGACCTTCGAGGGTATTCTGCCTGGTCTCTGATGGACAACTTTGAGTGGCTAGAAGGTTACACAGTCAAGTTTGGTCTGTACCATGTTGACTTTGAGGATGTGAACAGGCCTCGCACAGCAAGAGCCTCAGCCAGCTACTACACAGAGGTCATTACCAACAATGGCATGCCAATGCCCAAGGAAGATGAGTTCCTGTACGGAGAGTTTCCCAAGGGCTTCATCTGGAGTGCAGCTTCTGCTGCATATCAGATCGAGGGTGCATGGAGAGCAGATGGAAAAGGACTTAGTATTTGGGATATGTATTCTCACACACCACTAAGGATTGAAAACGATGATACTGGAGATGTGGCCTGCGACAGTTATCATAAGATTGCCGAGGATGTAGTTGTCCTGCAGAACCTGGGTGTATCCCACTATCGCTTTTCCATCTCCTGGACTCGCATCCTCCCTGATGGAACCACCAAGTACATCAATGAAATGGGCCTGAACTACTATGTGCGGCTCATCGATGCACTGCTGGCTGCCAACATCGAGCCCCAGGTGACCCTGTACCACTGGGACCTACCTCAGGCACTCCAGGATGTTGGAGGCTGGGAGAATGAGACCATTGTGCAACGGTTTAAAGAGTATGCAGATGTGCTCTTCCGGAGGCTAGGGGACAAAGTGAAGTTCTGGATCACACTGAACGAGCCCTTTGTCATTGCTTGCCATGGTTATGGCACTGGGGTATCAGCTCCAGGAATCTCCTCTAGGCCTGGCACTGCTCCCTACACTGCTGGCCACAACCTAATAAAGGCTCATGCTGAGGCCTGGCATCTGTACAATGATGTGTACCGCGCCAGTCAAGGTGGCATGATTTCCATCACCATCAGCAGTGACTGGGCTGAGCCCAGGGATCCCTCCAACCAGGAGGATGTGGAGGCAGCTAGGAGATATGTTCAGTTCATGGGAGGCTGGTTTGCACATCCTATTTTTAAGAATGGAGATTACCCTGATGTGATGAAGACACGGATCCGTGACAGGAGCTTGGCTGCAGGCCTCAACAAGTCCCGGCTCCCGGAGTTCACACAGAGTGAGAAGAGGAGGATCAATGGCACCTACGATTATTTTGGGTTCAATCACTATACCACTGTCCTGGCCTACAACCTTAACTATGCTTCTGTCTACTCTTCCTTTGACGCAGACAGGGGAGTTATGTCCATTGCAGATCAATCTTGGCCAGTTTCTGGCTCCTTCTGGCTGAAGATGACACCTTTTGGCTTCAGGAGAATCCTAAACTGGTTGAAGGAGGAGTACAACAACCCACCAATTTATGTAACAGAGAATGGAGTGTCTCAGCGGGGAGAAGTAGACCTGAATGACACTGCGAGGATTTATTATCTCCGCAGTTACATCAACGAGGCCCTCAAAGCTGTGCAGGATAAGGTGGACCTCCGTGGATACACAGTTTGGACGGTGATGGACAACTTCGAGTGGGCCACAGGCTTCACAGAGAGGTTTGGCCTGCACTATGTGAACCGCACGGACCCTTCTCTGCCAAGAATCCCTAAAGAGTCAGCCAAATTCTACGCCTCCGTAGTCCGGTGCAACGGCTTCCCCGACCCTGCAGCAGGGCCTCACCCTTGTCTCCAGCAGCCAGAAGATGCTGAACCCACCACCATCCCCGTGAGAGAGGAGGTGCCGTTCCTGGGGTTGAAGCTCGGCATCACAGAAGCACAGACAGCTTTGTATGTACTCTTTTCTCTCATGCTTCTTGGAGTCTGTGTCTTGGCATTTCTATCTTATAAATACTGCAAGTTCTCCAAGAAAGAGAAAACACAACCAAGCCAACAAGAATTAAGTCGTATTAGTTCATTCTGA

Related Sequences

XP_004836171.1 Protein

Lct PREDICTED: lactase-phlorizin hydrolase [Heterocephalus glaber]

Length: 1927 aa      View alignments
>XP_004836171.1
MEPSWKVALIILLSFSCQGSDWESDRNFISAAGPLTSDLLHNLSHLLGNQSSHFVAGYKDIYTCHQPLPSFIPEYFKSLHNSKITHYKVFLSWAQLLPSGSSRNPDGKTLQCYRQLLEALKTAQLQPMVILHHQTLPTSTLQRSRVFADLFADYATFAFHSFGDLVGIWFTFSDLKGTMMGLSHKESRASHLQTLTDAHRKVYEIYHAKYASQGGKLSVVLPSDDLLEALLEPSVSALAKDSVDFLSLDLSYECQSEASLPEKLNKLQSIEPKVKVFIFTLKLQDCPSTKKNPARMLFSLFEAINKDHVCTIGFDVNEFLSCSSSKKSMSCSLTDSLALQSDQQQDRDTAGGPLSPDSAYWRVWEAFANQSRTERDAFLQDVFPEDFLWGVSTGAFNVEGGWAEGGRGASIWDQYGLNGTRGQATPEVASDSYHKSASDVALLRGLRAQVYKFSISWSRIFPTGHRSSPNLQGVTYYNKLIDTLLGSHIKPMVTLFHWDLPQALQDLGGWQNENVVDAFLDYAAFCFSTFGDRVKLWVTFHEPWVVSYAGYGTGQHAPGISDPGVASFKVAHLILKAHARTWHHYNSHHRAQQQGSVGIVLNSDWAEPLSPEQPEDLTASERFLHFMLGWFAHPIFVDGGYPPTMKAQIQQLNKQCSGPVAQLPEFTRAEKQLIKGSADFLGLSHYTSRLIRKGQQDTCVPSYENIGGFSQHVDPAWPQTASPWIRVVPWGIRRLLQFVSMEYTRGKVPIYLAGNGMPIGENNSLFDDSSRVAYFNQYINEVLKAVKEDSVDVRSYIARSLIDGFEGPSGYSQRFGLHHVNFSDSSKPRTPRKSACFFTTIIEKNGFTTKVVKRSLPSKVAELPSKIRTFNFPSEVPSKAKVVWEKFSNQPKFERDFFYHGTFRDDFLWGVSSSAYQIEGAWDAEGKGPSIWDNFTHTPGNAVKDNATGDIACDSYNNLDADLNILRALKVKAYRFSMAWSRIFPDGTNSFINRAGVEYYNRLISGLVASNILPMVTLFHWDLPQALQDIGGWENPSLIELFDSYADFCFQTFGDRVKFWMTFNEPAIQAWNGYGLGNFPPNVKDPGWGPYRIGHAVIKAHARVYHTYDEKYRQQQQGVISLSLSTHWAEPKSPGVPRDVEAADRMLQFSLGWFAHPIFRNGDYPDVMKWKVGNRSELQHLATSRLPSFTEEEKRYIRGTADVFCFNTYSSRLVQHTTPPLNPPSYQYDQEITEEEDPSWVATAINRAAPWGIRRLLNWIKEEYGDVPIYITENGVGLTSGALQDTDRIFYHKTYINEALKAYRLDGIDLRGYSAWSLMDNFEWLEGYTVKFGLYHVDFEDVNRPRTARASASYYTEVITNNGMPMPKEDEFLYGEFPKGFIWSAASAAYQIEGAWRADGKGLSIWDMYSHTPLRIENDDTGDVACDSYHKIAEDVVVLQNLGVSHYRFSISWTRILPDGTTKYINEMGLNYYVRLIDALLAANIEPQVTLYHWDLPQALQDVGGWENETIVQRFKEYADVLFRRLGDKVKFWITLNEPFVIACHGYGTGVSAPGISSRPGTAPYTAGHNLIKAHAEAWHLYNDVYRASQGGMISITISSDWAEPRDPSNQEDVEAARRYVQFMGGWFAHPIFKNGDYPDVMKTRIRDRSLAAGLNKSRLPEFTQSEKRRINGTYDYFGFNHYTTVLAYNLNYASVYSSFDADRGVMSIADQSWPVSGSFWLKMTPFGFRRILNWLKEEYNNPPIYVTENGVSQRGEVDLNDTARIYYLRSYINEALKAVQDKVDLRGYTVWTVMDNFEWATGFTERFGLHYVNRTDPSLPRIPKESAKFYASVVRCNGFPDPAAGPHPCLQQPEDAEPTTIPVREEVPFLGLKLGITEAQTALYVLFSLMLLGVCVLAFLSYKYCKFSKKEKTQPSQQELSRISSF