Sequence details NCBI ID: XM_004836101.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mgat5
Gene Name mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, transcript variant X3
Entrez Gene ID 101721991

Database interlinks

Part of NW_004624732.1 (Scaffold)

For more information consult the page for NW_004624732.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MGAT5 ENSCPOG00000004942 (Guinea pig)

Gene Details

mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004449, Guinea pig)

Protein Percentage 96.49%
CDS Percentage 94.83%
Ka/Ks Ratio 0.11112 (Ka = 0.0188, Ks = 0.1695)

MGAT5 ENSG00000152127 (Human)

Gene Details

mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSP00000386377, Human)

Protein Percentage 97.44%
CDS Percentage 93.57%
Ka/Ks Ratio 0.04474 (Ka = 0.0118, Ks = 0.2631)

Mgat5 ENSMUSG00000036155 (Mouse)

Gene Details

mannoside acetylglucosaminyltransferase 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000129166, Mouse)

Protein Percentage 95.68%
CDS Percentage 88.69%
Ka/Ks Ratio 0.03614 (Ka = 0.0206, Ks = 0.5694)

Mgat5 ENSRNOG00000003614 (Rat)

Gene Details

mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase (Mgat5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004995, Rat)

Protein Percentage 95.95%
CDS Percentage 89.23%
Ka/Ks Ratio 0.0364 (Ka = 0.0193, Ks = 0.5295)

Genome Location

Sequence Coding sequence

Length: 2226 bp    Location: 33692378..33898834   Strand: +
Raw sequence   
>XM_004836101.1
ATGGCTCTCTTTACTCCCTGGAAGTTGTCTTCTCAGAAGCTGGGCTTTTTCCTGGTGACTTTTGGCTTCATTTGGGGGATGATGCTTCTGCATTTTACCATCCAGCAGCGAACTCAGCCTGAAAGCAGCTCCATGTTGCGGGAGCAGATCCTGGACCTCAGCAAAAGGTACATCAAGGCATTGGCAGAAGAAAACAGGAATGTAGTGGATGGGCCATATGCTGGTGTCATGACAGCTTATGATCTGAAGAAAACTCTTGCTGTGTTATTGGATAACATTTTGCAGCGCATTGGCAAGCTGGAGTCGAAGGTGGACAATCTTGTTATCAATGGCACAGGAACAAATTTAACCAACTCCACCACAGCTGTTCCCAGTTTGGTAGCACTTGAGAAGATTAATGTGGCAGATATCATTAATGGAGCTCAAGAAAAATGTGTATTGCCTCCTATGGATGGCTTCCCCCACTGTGAGGGGAAAATAAAGTGGATGAAAGATATGTGGCGTTCAGATCCCTGCTACGCAGACTATGGAGTGGATGGGTCCACCTGCTCTTTCTTTATTTACCTCAGTGAGGTTGAAAATTGGTGTCCTCATTTACCTTGGAGAGTAAAAAATCCCTATGAAGAAGCTGATCATAATTCATTGGCAGAAATTCGTATGGATTTTAATATTCTCTACAGTATGATGAAAAAGCATGAAGAATTCCGGTGGATGAGACTTCGGATCCGGCGAATGGCTGATGCTTGGATTCAAGCAATCAAGTCCTTGGCAGAAAAGCAAAATCTTGAAAAGAGAAAGCGGAAGAAAGTCCTTGTTCACCTGGGACTCCTGACCAAGGAATCTGGATTTAAGATCGCAGAGACTGCATTCAGTGGTGGCCCTCTTGGTGAATTAGTTCAGTGGAGTGATTTAATTACATCTCTGTACTTACTGGGCCATGACATTAGGATTTCAGCTTCACTGGCGGAGCTCAAGGAAATTATGAAGAAGGTTGTAGGAAACCGGTCTGGCTGCCCAACTATAGGAGACAGAATCGTCGAGCTCATTTATATTGATATTGTGGGACTTGCTCAGTTCAAGAAAACTCTGGGACCCTCTTGGGTTCATTACCAGTGCATGCTCCGAGTCCTGGATTCATTTGGTACTGAGCCAGAGTTTAATCATGCAAATTATGCCCAGTCCAAAGGCCACAAGACCCCCTGGGGAAAATGGAATCTGAACCCTCAGCAGTTTTATACCATGTTCCCTCACACCCCAGACAACAGCTTTCTGGGCTTTGTGGTCGAGCAGCACCTGAACTCCAGCGACATCCATCACATTAACGAAATCAAAAGGCAGAACCAGTCCCTTGTGTATGGCAAAGTGGATAGCTTCTGGAAGAATAAGAAGATCTACCTGGATATCATTCACACTTACATGGAAGTGCATGCAACTGTTTATGGTTCCAGCACAAAGAACATCCCTAGTTACGTGGAAAACCACGGTATCCTCAGTGGACGGGACCTACAGTTTCTTCTGCGAGAAACCAAGTTGTTTGTTGGACTTGGGTTTCCTTATGAGGGCCCAGCTCCCCTGGAGGCTATTGCAAATGGATGTGCTTTTCTGAATCCCAAGTTCAACCCACCAAAAAGCAGCAAAAACACAGACTTTTTCATTGGCAAGCCAACCTTAAGAGAGCTGACGTCCCAGCATCCTTACGCTGAAGTTTTCATCGGCCGGCCACATGTCTGGACTGTTGATCTCAACAGTCAAGAGGAAGTAGAGGATGCAGTGAAAGCAATTTTAAATCAGAAGATTGAGCCGTACATGCCATATGAATTCACCTGTGAGGGGATGCTACAGAGGATCAACGCATTCATCGAGAAGCAGGACTTCTGCCATGGGCAAGTGATGTGGCCTCCGCTGAGTGCCCTGCAGGTGAAGCTTGCCGAGCCTGGGCAGTCCTGCAAGCAGGTGTGCCAGGAGAGCCAGCTCATCTGCGAGCCGTCCTTCTTCCAGCACCTCAATAAGGTCAAGGACCTGCTGAAGTACGAGGTGATCTGCCAGAGCTCAGAGCAGGCCAAGGACATCCTGGTGCCCTCCATCGACCCCCAGAGCAAGCACTGTGTGTTCCAAGGGGACCTCCTGCTCTTCAGCTGTGCAGGGGCCAACCCGAGGCACCAGAGGATCTGCCCCTGCCGGGACTACATCAAGGGCCAGGTGGCCCTCTGCAAAGACTGCCTATAG

Related Sequences

XP_004836158.1 Protein

Mgat5 PREDICTED: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X3 [Heterocephalus glaber]

Length: 741 aa      View alignments
>XP_004836158.1
MALFTPWKLSSQKLGFFLVTFGFIWGMMLLHFTIQQRTQPESSSMLREQILDLSKRYIKALAEENRNVVDGPYAGVMTAYDLKKTLAVLLDNILQRIGKLESKVDNLVINGTGTNLTNSTTAVPSLVALEKINVADIINGAQEKCVLPPMDGFPHCEGKIKWMKDMWRSDPCYADYGVDGSTCSFFIYLSEVENWCPHLPWRVKNPYEEADHNSLAEIRMDFNILYSMMKKHEEFRWMRLRIRRMADAWIQAIKSLAEKQNLEKRKRKKVLVHLGLLTKESGFKIAETAFSGGPLGELVQWSDLITSLYLLGHDIRISASLAELKEIMKKVVGNRSGCPTIGDRIVELIYIDIVGLAQFKKTLGPSWVHYQCMLRVLDSFGTEPEFNHANYAQSKGHKTPWGKWNLNPQQFYTMFPHTPDNSFLGFVVEQHLNSSDIHHINEIKRQNQSLVYGKVDSFWKNKKIYLDIIHTYMEVHATVYGSSTKNIPSYVENHGILSGRDLQFLLRETKLFVGLGFPYEGPAPLEAIANGCAFLNPKFNPPKSSKNTDFFIGKPTLRELTSQHPYAEVFIGRPHVWTVDLNSQEEVEDAVKAILNQKIEPYMPYEFTCEGMLQRINAFIEKQDFCHGQVMWPPLSALQVKLAEPGQSCKQVCQESQLICEPSFFQHLNKVKDLLKYEVICQSSEQAKDILVPSIDPQSKHCVFQGDLLLFSCAGANPRHQRICPCRDYIKGQVALCKDCL