Details from NCBI annotation

Gene Symbol Tfcp2l1
Gene Name transcription factor CP2-like 1, transcript variant X2
Entrez Gene ID 101697022

Database interlinks

Part of NW_004624732.1 (Scaffold)

For more information consult the page for NW_004624732.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TFCP2L1 ENSCPOG00000011523 (Guinea pig)

Gene Details

transcription factor CP2-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010365, Guinea pig)

Protein Percentage 98.89%
CDS Percentage 94.54%
Ka/Ks Ratio 0.01679 (Ka = 0.0048, Ks = 0.2833)

TFCP2L1 ENSG00000115112 (Human)

Gene Details

transcription factor CP2-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000263707, Human)

Protein Percentage 97.08%
CDS Percentage 91.3%
Ka/Ks Ratio 0.03112 (Ka = 0.014, Ks = 0.4513)

Tfcp2l1 ENSMUSG00000026380 (Mouse)

Gene Details

transcription factor CP2-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027629, Mouse)

Protein Percentage 94.15%
CDS Percentage 88.66%
Ka/Ks Ratio 0.04649 (Ka = 0.0266, Ks = 0.5717)

Tfcp2l1 ENSRNOG00000002414 (Rat)

Gene Details

transcription factor CP2-like 1 (Tfcp2l1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003280, Rat)

Protein Percentage 94.78%
CDS Percentage 88.59%
Ka/Ks Ratio 0.04119 (Ka = 0.0242, Ks = 0.5882)

Genome Location

Sequence Coding sequence

Length: 1440 bp    Location: 23855382..23911731   Strand: +
>XM_004836046.1
ATGCTGTTCTGGCACACTCAGCCCGAGCACTACAACCAGCACAACTCAGGCAGCTACCTGCGTGATGTGCTTGCTCTGCCCATCTTCAAGCAAGAGGAGCCCCAGTTGTCACCTGAGAACGGGGCCCGCCTGCCACCCCTGCAGTACGTGCTGTGTGCTGCCACATCACCGGCCGTGAAGCTGCATGAGGAAACCCTGACCTACCTCAACCAAGGTCAATCATATGAAATCCGACTGCTGGAGAACCGGAAGTTGGGAGACTTTCAAGATCTAAACACAAAATATGTCAAGAGCATCATTCGAGTGGTTTTCCATGACCGCCGTCTTCAGTACACCGAACACCAGCAGCTGGAGGGCTGGCGGTGGAGCCGGCCGGGGGACCGCATCCTAGACATTGATATTCCACTGTCTGTTGGTATCTTGGACCCCAGGGCCAGCCCAACCCAGCTGAATGCAGTTGAGTTCTTATGGGACCCTGCAAAGAGGGCGTCTGCGTTCATTCAGGTGCACTGTATCAGCACGGAGTTCACCCCCAGGAAGCATGGGGGTGAGAAAGGAGTGCCTTTCCGGGTGCAGATTGACACCTTTAAGCAGAACGAGAATGGGGAGTACACGGAGCACCTGCACTCGGCCAGCTGCCAGATCAAGGTGTTCAAGCCAAAGGGAGCTGACCGGAAACAGAAGACAGACCGGGAAAAGATGGAGAAAAGAACTGCTCAAGAGAAGGAGAAGTACCAGCCATCCTATGAAACCACTATCCTCACAGAGTGCTCTCCATGGCCTGATGTGCCTTACCAGGTGAACAGTGCCCCATCCCCAAGCTACAATGGCTCTCCCAACAGCTTCGGCCTTGGCGAAGGCAACAGCTCACCGACCCACCAGGTGGAGGCCCTGCCCATGGGCAGTGATCACCTGCTGCCATCAGCCTCCATCCAGGATGCCCAGCAGTGGCTCCACCGTAACAGATTCTCACAGTTCTGCCGCCTCTTTGCCAGCTTCTCAGGTTCTGACTTGCTGAAGATGTCCAGAGATGATCTGGTCCAGATCTGTGGCCCTGCAGATGGAATCCGGCTCTTCAATGCCATCAAAGGCAGGAATGTGAGGCCAAAGATGACCATCTATGTCTGTCAGGAGTTGGAGCAGAACCGAGTGTCCCTACAGCAGAAGCGGGATGGCAGCAGTGACAGCAGCCTATGTGTGTACCATGCCATCTTCTTGGAAGAGCTGACCACCTTGGAGCTGATTGAGAAGATCGCCAACCTGTACAGCATCCCCCCACAGCACATCCACCGAGTCTACCGGCAGGGCCCCACGGGCATCCACGTGCTGGTGAGCAATGAGATGGTGCAGAATTTCCAAGATGAATCTTGTTTTATCCTCAGCACATTAAAAGCCGAGAGCAATGATGGCTACCACATCATCCTGAAATGTGGACTCTGA

Related Sequences

XP_004836103.1 Protein

Tfcp2l1 PREDICTED: transcription factor CP2-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 479 aa      View alignments
>XP_004836103.1
MLFWHTQPEHYNQHNSGSYLRDVLALPIFKQEEPQLSPENGARLPPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPAKRASAFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQEKEKYQPSYETTILTECSPWPDVPYQVNSAPSPSYNGSPNSFGLGEGNSSPTHQVEALPMGSDHLLPSASIQDAQQWLHRNRFSQFCRLFASFSGSDLLKMSRDDLVQICGPADGIRLFNAIKGRNVRPKMTIYVCQELEQNRVSLQQKRDGSSDSSLCVYHAIFLEELTTLELIEKIANLYSIPPQHIHRVYRQGPTGIHVLVSNEMVQNFQDESCFILSTLKAESNDGYHIILKCGL