Details from NCBI annotation

Gene Symbol Wdsub1
Gene Name WD repeat, sterile alpha motif and U-box domain containing 1, transcript variant X2
Entrez Gene ID 101705204

Database interlinks

Part of NW_004624732.1 (Scaffold)

For more information consult the page for NW_004624732.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

WDSUB1 ENSCPOG00000008696 (Guinea pig)

Gene Details

WD repeat, sterile alpha motif and U-box domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007808, Guinea pig)

Protein Percentage 94.33%
CDS Percentage 93.28%
Ka/Ks Ratio 0.12554 (Ka = 0.0274, Ks = 0.2182)

WDSUB1 ENSG00000196151 (Human)

Gene Details

WD repeat, sterile alpha motif and U-box domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000387078, Human)

Protein Percentage 92.23%
CDS Percentage 90.9%
Ka/Ks Ratio 0.12434 (Ka = 0.0387, Ks = 0.3114)

Wdsub1 ENSMUSG00000026988 (Mouse)

Gene Details

WD repeat, SAM and U-box domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028368, Mouse)

Protein Percentage 84.39%
CDS Percentage 80.87%
Ka/Ks Ratio 0.1198 (Ka = 0.091, Ks = 0.7595)

Wdsub1 ENSRNOG00000005990 (Rat)

Gene Details

WD repeat, sterile alpha motif and U-box domain containing 1 (Wdsub1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008168, Rat)

Protein Percentage 85.5%
CDS Percentage 80.6%
Ka/Ks Ratio 0.10216 (Ka = 0.085, Ks = 0.8317)

Genome Location

Sequence Coding sequence

Length: 1431 bp    Location: 6372470..6415937   Strand: +
>XM_004835895.1
ATGGTGAAATTAATTCACACATTGGCTGATCATAGTGATGATGTCAATTGCTGTGCATTCTCTTCTTCCCTGTTGGCTACTTGCTCCTTGGACAAAACAATTCGCCTGTACTCCCTAAGTGACTTCGCTGAACTGTCGTACTCTCCACTGAAATTCCACACCTATGCTGTCCACTGCTGCTGTTTCTCTCCTTCGGGACATATTTTGGCATCATGTTCAACTGACGGTACCACTGTCCTGTGGAGTACTCACAATGGACAGACCTTGGCAGTGATGGAACAGCCCGGGGGTAGCCCCGTGAGGGTTTGCCAGTTTTCCCCAGACTCCTCTTGTTTGGCATCTGGGGCAGCTGATGGAACTGTTGTTTTGTGGAATGCACAATCACACAAGTTATATAGATGTGGTAGTGTTAAGGATGGCTCCTTGGTGGCCTGTGCATTTTCTCCTAATGGAAACCTCTTTGTCACTGGCTCCTCCTGTGGAGATTTAACAGTGTGGGATGACAAAATGAGATGTCTGCATAGTGAAAAAGCACATGACCTCGGGATTACTTGCTGCGATTTTTCTTCACAGCCAGTTTCTGGTGGAGAACAAGGTCTTCAGTTTTTTCGATTGGCATCATGTGGTCAGGATTGCCAAGTCAAAATTTGGGTTGTTTCTTTTACCCATGTCTTAGGTTGTGAATTAAAATATAAAAGTACTTTGAGTGGGCACTGTGCACCTGTTCTTACTTGTGCTTTTTCCCATGATGGACAGATGCTAGTCTCCGGGTCAGTGGATAAGTCTGTCATAATATATGATACAAATTCGCAGAATGTACTTCACACATTGACGCAGCATACCAGATATGTCACAGCATGTGCCTTTGCACCCAATACTCTCTTACTCGCTACTGGTTCAATGGACAAAACGGTGAACATCTGGCAATTTGACCTGGAAACACTGTGCCAAGCAAGGAGCATGGAAGATCAGCTGAAACAGTTTCCTGAAGATTGGTCAGAGGAAGATGTTTCACTGTGGCTTTGTGCACAAGGTTTAAAAGACCTTGTTGGTATTTTCAAGATGAATAACATTGATGGAAAAGAACTGTTGAATCTTACAAAAGAAAGTCTGACTGGTGATTTGAAAATAGAATCTCTAGGGCTGCGTAGTAAAGTGCTGAGGAAAATTGAAGAGCTCAGGACCAAAGTGAAATCCCTTTCTTCTGAAATTCCTGATGAGTTTATATGTCCAATAACTAGAGAACTTATGAAGGATCCTGTCATTGCATCAGATGGCTATTCCTATGAAAAGGAAGCAATGGAAAACTGGATCAGCAAAAAGAAACGTACAAGTCCCATGACAAATCTTGTTCTTCCTTCAGTAGTACTTACACCAAACAGGACGCTGAAAATGGCCATTAGTCGATGGCTAGAGACACATCAAAAATAA

Related Sequences

XP_004835952.1 Protein

Wdsub1 PREDICTED: WD repeat, SAM and U-box domain-containing protein 1 isoform X2 [Heterocephalus glaber]

Length: 476 aa      View alignments
>XP_004835952.1
MVKLIHTLADHSDDVNCCAFSSSLLATCSLDKTIRLYSLSDFAELSYSPLKFHTYAVHCCCFSPSGHILASCSTDGTTVLWSTHNGQTLAVMEQPGGSPVRVCQFSPDSSCLASGAADGTVVLWNAQSHKLYRCGSVKDGSLVACAFSPNGNLFVTGSSCGDLTVWDDKMRCLHSEKAHDLGITCCDFSSQPVSGGEQGLQFFRLASCGQDCQVKIWVVSFTHVLGCELKYKSTLSGHCAPVLTCAFSHDGQMLVSGSVDKSVIIYDTNSQNVLHTLTQHTRYVTACAFAPNTLLLATGSMDKTVNIWQFDLETLCQARSMEDQLKQFPEDWSEEDVSLWLCAQGLKDLVGIFKMNNIDGKELLNLTKESLTGDLKIESLGLRSKVLRKIEELRTKVKSLSSEIPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSVVLTPNRTLKMAISRWLETHQK