Details from NCBI annotation

Gene Symbol Rbms1
Gene Name RNA binding motif, single stranded interacting protein 1, transcript variant X4
Entrez Gene ID 101700095

Database interlinks

Part of NW_004624732.1 (Scaffold)

For more information consult the page for NW_004624732.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RBMS1 ENSCPOG00000012310 (Guinea pig)

Gene Details

RNA binding motif, single stranded interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011073, Guinea pig)

Protein Percentage 98.76%
CDS Percentage 96.28%
Ka/Ks Ratio 0.04881 (Ka = 0.0061, Ks = 0.1244)

RBMS1 ENSG00000153250 (Human)

Gene Details

RNA binding motif, single stranded interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000294904, Human)

Protein Percentage 98.51%
CDS Percentage 93.55%
Ka/Ks Ratio 0.02633 (Ka = 0.007, Ks = 0.2675)

Rbms1 ENSMUSG00000026970 (Mouse)

Gene Details

RNA binding motif, single stranded interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000131306, Mouse)

Protein Percentage 91.27%
CDS Percentage 86.45%
Ka/Ks Ratio 0.1293 (Ka = 0.0615, Ks = 0.4759)

Rbms1 ENSRNOG00000008482 (Rat)

Gene Details

RNA binding motif, single stranded interacting protein 1 (Rbms1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011682, Rat)

Protein Percentage 97.02%
CDS Percentage 90.9%
Ka/Ks Ratio 0.03991 (Ka = 0.0147, Ks = 0.3684)

Genome Location

Sequence Coding sequence

Length: 1212 bp    Location: 5104450..5319358   Strand: +
>XM_004835883.1
ATGGGCAAAGTGTGGAAACAGCAGATGTACCCTCAGTACGCCACCTACTACTACCCCCAGTATCTGCAAGCCAAGCAGTCTCTGGTCCCAGTGCACCCCATGGCCCCTCCTAGTCCCAGCACCACCAGCAGTAATAACAACAGTAGCAGCAGTAGCAACTCAGGATGGGATCAGCTAAGCAAAACAAACCTCTACATCCGAGGCCTGCCCCCTAACACCACTGACCAGGACCTGGTGAAGCTCTGTCAACCATATGGGAAAATAGTCTCCACAAAGGCAATTTTGGATAAGACAACAAACAAATGCAAAGGTTATGGTTTTGTTGACTTCGACAGTCCTGCAGCTGCTCAGAAAGCTGTGTCAGCCCTGAAGGCTAGTGGGGTTCAAGCTCAGATGGCAAAGCAACAGGAACAAGATCCTACCAACTTGTATATTTCTAATTTGCCACTGTCCATGGATGAGCAGGAACTTGAAAATATGCTGAAACCCTTTGGACAGGTTATTTCTACAAGAATACTACGTGATTCCAGTGGTACAAGTCGTGGTGTTGGCTTTGCCAGAATGGAATCAACAGAAAAATGTGAAGCTGTAATTGGTCATTTTAATGGGAAATTCATTAAGACGCCACCAGGAGTTTCTGCTCCCACCGAACCATTATTGTGCAAGTTTGCAGATGGAGGACAGAAGAAAAGACAGAACCCAAACAAATATATCCCTAATGGAAGACCCTGGCATAGAGAAGGAGAGGCTAGTATGACACTCACTTATGACCCAACTACGGCTGCTATACAGAACGGATTTTATCCTTCACCATACAGTATTGCTACAAACCGAATGATCACTCAAACTTCTCTTACACCCTATATTGCATCTCCTGTATCTGCCTACCAGGTGCAAAGTCCTTCCTGGATGCAACCTCAACCATACATCCTACAGCACCCTGGCGCCGTGCTAACTCCCTCGATGGAGCACACCATGTCACTACAGCCCGCATCCATGATCAACCCTCTGGCCCAGCAGATGAGTCATCTTTCACTAGGCAGCACCGGAACATACATGCCTGCCACATCAGCTATGCAAGGAGCCTACCTGCCGCAGTACACACACATGCAGACAACAGCCGTTCCTGTTGAGGAGGCGAGTGGTCAGCAACAAGTGGCTGTAGAGACATCTAATGACCATTCTCCATATACCTTCCAACCCAATAAGTAA

Related Sequences

XP_004835940.1 Protein

Rbms1 PREDICTED: RNA-binding motif, single-stranded-interacting protein 1 isoform X4 [Heterocephalus glaber]

Length: 403 aa      View alignments
>XP_004835940.1
MGKVWKQQMYPQYATYYYPQYLQAKQSLVPVHPMAPPSPSTTSSNNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEPLLCKFADGGQKKRQNPNKYIPNGRPWHREGEASMTLTYDPTTAAIQNGFYPSPYSIATNRMITQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMINPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTTAVPVEEASGQQQVAVETSNDHSPYTFQPNK