Sequence details NCBI ID: XM_004835855.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ifih1
Gene Name interferon induced with helicase C domain 1, transcript variant X2
Entrez Gene ID 101721395

Database interlinks

Part of NW_004624732.1 (Scaffold)

For more information consult the page for NW_004624732.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IFIH1 ENSCPOG00000007154 (Guinea pig)

Gene Details

interferon induced with helicase C domain 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006451, Guinea pig)

Protein Percentage 85.91%
CDS Percentage 89.5%
Ka/Ks Ratio 0.42998 (Ka = 0.0888, Ks = 0.2066)

IFIH1 ENSG00000115267 (Human)

Gene Details

interferon induced with helicase C domain 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000263642, Human)

Protein Percentage 84.29%
CDS Percentage 87.87%
Ka/Ks Ratio 0.27184 (Ka = 0.087, Ks = 0.32)

Ifih1 ENSMUSG00000026896 (Mouse)

Gene Details

interferon induced with helicase C domain 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028259, Mouse)

Protein Percentage 76.66%
CDS Percentage 79.82%
Ka/Ks Ratio 0.1981 (Ka = 0.1425, Ks = 0.7191)

Ifih1 ENSRNOG00000006227 (Rat)

Gene Details

interferon induced with helicase C domain 1 (Ifih1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009621, Rat)

Protein Percentage 75.51%
CDS Percentage 79.09%
Ka/Ks Ratio 0.21717 (Ka = 0.1551, Ks = 0.7142)

Genome Location

Sequence Coding sequence

Length: 3081 bp    Location: 3193988..3248718   Strand: +
Raw sequence   
>XM_004835855.1
ATGTCGGACGGGCCCTCCGCAGACAAGTGCTTCCTCTATCTCCTCTCGTGCTTCAGGACGCGAGTGAAAATGTACATCCAGGTAGAGCCCGTGCTGGACTACCTGACCTTTCTGCCTACAGACGTAAAGGAGCAGATTGTGAGGACGGCCTACACCTCTGGGAACATGAAGGCAGTCGAACTGCTTCTGAGCACCTTGGAGCGGGAGCAGGGCTGGGGCCCTGGCTGGACTCGGGAGTTCGTGGACGCCCTCCAGAGAGCAGGCAGCCCCCTGGCTGCCCGCTACGTGAACCCCGACCTCACCGACTTGCCCTCCCCATCCTTTGAGGCCACTCAAGATGAATGTCTCCAGCTGCTGACCCTTCTTCAGCCCACTCTGGTGGACAGGCTTCTGGTTAGGGATGTCCTGGATAAATGCCTGGAGGAGGAGCTGTTGACCATTGAAGACCGAAGTCGGATTTCTGCTGCAGAAAATAATGGAAATGAATCAGGTGTGAGAGAGCTACTAAAAAGGATCATACAGAAGGAAAACTGGTTTTCTACATTTCTGCATATACTTCATCAAACAGGAAACAGTGCCCTTGCTCAAGTGTTAACAGGTGGTGATGACTCCAAAAGCAATGCAGAGATTGAGAATTTATCACATGAAGATGGTCCTGAAGTTAATGAGTCACTTCTTTCAGCCACAGATCAGTCAGATCTAGAGAAAGAGGACTGGAGCATCAAGAATAATTTATCAGAGTCATCGTTTGCAGATTCTTCTGTAGTTTCAGAATCAGACACAAGTTTGGCAGAAGGAAGTGTCAGCTGCTTAGATGAAAGTCTTGGACATAACAGCAACATGGGCAGTGATTCAGGCACCATGGGAAGTGATTCAGATGAAGGGAATGTGGCAAAAAGAGCATCTCCTGAGCCAGAACTGAAGCTCAGGTCGTACCAAAGGGAAGTTGCCCAGCCAGCCATGGAAGGGAAGAATGTCATCATATGCCTCCCTACAGGCAGTGGGAAAACCAGAGTGGCTGTTTACGTTGCCAAGCATCACTTGGACAAGAAGAAGCAAGCATCAGAGCCTGGAAAAGTTATAGTGCTTGTTAATAAGGTGATGTTAGTTGAACAGCTCTTCCACAAAGAATTCAAACCATATTTGAAGAAATGGTATCATATTACTGGATTAAGTGGTGATATTCAACTGAAAATATCATTTCCAGAAGTTGTCAGATCCTATGATGTTATTATCAGTACAGCTCAAATCCTTGAAAACTCCCTGTTAAATTCAGAAAGTGGAGAAGATGCTGGTGTCCAGCTGTCAGATTTTTCCCTCATTATCATTGATGAATGTCATCACACCAACAAAGAAGCTGTCTATAACAACATCATGAGGCGTTACATGAAACAGAAGTTGAAAAACAAGAGACTCCAGAAAGAAAACAAACCAGTGATTCCCCTGCCTCAGATATTAGGACTAACAGCTTCACCTGGTGTTGGAGGGGCCACAACGCAAGCCAAAGCTGAAGAACACATTTTAAAAATTTGTGCCAATCTTGATGCATTTGCCATTAAAACAGTCAAAGAATATTATGATCAACTCAAAGACCAAATAAAGGAGCCATGCAAGAAGTTTGTGATTGCAGATGACACTAGAGAAGATCTGTTTAAAGAGAAACTGCTAGAAATAATGTCAAGCATTCAAGCTTACTGCCAACTGGGTCCGATGTCAGATTTTGGAACTCAAAATTATGAGCAATGGGCCATTCAAATGGAAAAAAAAGCTGCTAGAGAAGGAAATCGAAAAGTCCGTGTCTGTGCAGAACACTTGAGGAAGTATAATGAAGCCCTACAAATTAATGACACAATCCGAATGATTGATGCATATAATCACCTTGAAACTTTCTATCATGATGAGAATGTGAAGAAGTTGGCAGTTCTGGAAGATGACAGTGATGAGAGTGCTAGTGATGATGATTGTGATGGTGATGGAGATGAAGATGCTTTAAAGAGACCGGTGAAACAAGATATGACAGATAGATTTCTCATGACTTTATTTTTTGAAAACAAAAAAATGTTGAAAAAACTGGCTGATAACCCAGAGCATGAAAATGAAAAGCTGACCAAATTAAGAAATACTATATTGGAACAATATACAAAAACTGAGAAACCAGCACATGGAATAATTTTTACAAAAACCCGACAAAGTGCATATGCCCTTTCCCAGTGGATTACTGAAAATGGAAAATTTGCAGAAGTAGGAGTCAAAGCCCATCATCTGATTGGAGCTGGACACAGCAGCGAGTTCAAGCCTATGACACAGAATGAACAAAAAGAAGTCATTAGTAAATTTCGCACTGGGAAAATAAATCTGCTTATCGCTACCACAGTGGCAGAAGAGGGTCTGGATATCAAAGAATGTAATATTATTATCCGTTATGGTCTTGTCACTAATGAAATAGCCATGGTGCAGGCCCGTGGTCGAGCCAGAGCTGAAGAGAGTACCTATGTCCTGGTTGCCCACAGCGGTTCGGGAGTTGTTGAACGTGAGACAGTTAATGATTTTCGAGAGAAGATGATGTATAAAGCTATTCACCATGTTCAGAATATGAATCCAGAGGAGTATGTTAAGAAGATTTTGGAATTACAGATGCAAAGCATAATGGAACAGAAAATGAAAATCAAGAGAAATATTGCAAAGCATTTCAAGGGCAATCCATCATCCATAACTTTTCTCTGCAAAAATTGTCATGTGGTAGCCTGCTCAGGGGAAGATATTCATGTAATTGAGAGGATGCATCATGTAAATATGACAAAAGAATTAAAGCAACTCTATATTGTGAGAGAAAACAAAGCACTGCAAAATAAGTTTGCTGACTATCAAACAAATGGAGAGATCATCTGCAAATGTGGCCAAGCTTGGGGAACAATGATGGTGCACAAAGGCTTAGATTTTCCCTGTCTCAAAATAAGGAACTTTGTAGTGGTTTTCAAAGATAACTCAACCAAGAAGCAATACAAAAAGTGGGTTGAATTACCTATCACATTTCCTGAACTTGACTACTCAGAATATTATGACTTTAGTGATGAAGATTAG

Related Sequences

XP_004835912.1 Protein

Ifih1 PREDICTED: interferon-induced helicase C domain-containing protein 1 isoform X2 [Heterocephalus glaber]

Length: 1026 aa      View alignments
>XP_004835912.1
MSDGPSADKCFLYLLSCFRTRVKMYIQVEPVLDYLTFLPTDVKEQIVRTAYTSGNMKAVELLLSTLEREQGWGPGWTREFVDALQRAGSPLAARYVNPDLTDLPSPSFEATQDECLQLLTLLQPTLVDRLLVRDVLDKCLEEELLTIEDRSRISAAENNGNESGVRELLKRIIQKENWFSTFLHILHQTGNSALAQVLTGGDDSKSNAEIENLSHEDGPEVNESLLSATDQSDLEKEDWSIKNNLSESSFADSSVVSESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDEGNVAKRASPEPELKLRSYQREVAQPAMEGKNVIICLPTGSGKTRVAVYVAKHHLDKKKQASEPGKVIVLVNKVMLVEQLFHKEFKPYLKKWYHITGLSGDIQLKISFPEVVRSYDVIISTAQILENSLLNSESGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYMKQKLKNKRLQKENKPVIPLPQILGLTASPGVGGATTQAKAEEHILKICANLDAFAIKTVKEYYDQLKDQIKEPCKKFVIADDTREDLFKEKLLEIMSSIQAYCQLGPMSDFGTQNYEQWAIQMEKKAAREGNRKVRVCAEHLRKYNEALQINDTIRMIDAYNHLETFYHDENVKKLAVLEDDSDESASDDDCDGDGDEDALKRPVKQDMTDRFLMTLFFENKKMLKKLADNPEHENEKLTKLRNTILEQYTKTEKPAHGIIFTKTRQSAYALSQWITENGKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIIIRYGLVTNEIAMVQARGRARAEESTYVLVAHSGSGVVERETVNDFREKMMYKAIHHVQNMNPEEYVKKILELQMQSIMEQKMKIKRNIAKHFKGNPSSITFLCKNCHVVACSGEDIHVIERMHHVNMTKELKQLYIVRENKALQNKFADYQTNGEIICKCGQAWGTMMVHKGLDFPCLKIRNFVVVFKDNSTKKQYKKWVELPITFPELDYSEYYDFSDED