Details from NCBI annotation

Gene Symbol Gca
Gene Name grancalcin, EF-hand calcium binding protein, transcript variant X3
Entrez Gene ID 101720587

Database interlinks

Part of NW_004624732.1 (Scaffold)

For more information consult the page for NW_004624732.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GCA ENSCPOG00000001568 (Guinea pig)

Gene Details

grancalcin, EF-hand calcium binding protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001417, Guinea pig)

Protein Percentage 83.51%
CDS Percentage 88.32%
Ka/Ks Ratio 0.33096 (Ka = 0.0935, Ks = 0.2826)

GCA ENSG00000115271 (Human)

Gene Details

grancalcin, EF-hand calcium binding protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000394842, Human)

Protein Percentage 77.27%
CDS Percentage 83.84%
Ka/Ks Ratio 0.34425 (Ka = 0.1375, Ks = 0.3993)

Gca ENSMUSG00000026893 (Mouse)

Gene Details

grancalcin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028257, Mouse)

Protein Percentage 84.42%
CDS Percentage 82.75%
Ka/Ks Ratio 0.12366 (Ka = 0.0909, Ks = 0.7353)

Genome Location

Sequence Coding sequence

Length: 666 bp    Location: 3193864..3161696   Strand: -
>XM_004835853.1
ATGCAGATGGGACAGCCAGTGCCCAGAGCAGGTCCAAACTTTTACCCTGGAGGATACCAGCCTGGGCACACAGTGTATATGGGCAGCTATTCTTCAGCTGATGACTCCATGTGGACTTACTTCACTGCTATTGCTGGGCAGGATGGGGAAGTGGATGCTGAAGAACTGCAAAGATGTTTGACACAGTCTGGAATTAGTGGAACTTATTCGCCCTTCAGCTTGGAAACTTGCAGAATTATGATTGCCATGTTGGATAGAGATTATACAGGAAAAATGGGGTTTAATGAATTCAAGGAGCTTTGGGCAGCTCTTAATGCCTGGAAGCAGAATTTCATGACCTTTGATCAAGACCGGAGTGGCTCAGTAGAGCATCATGAATTAAGTCAAGCCATCGCTGTTATGGGTTATAGATTGAGTACTCAAACATTAAATGCTATTGTTAAACGTTACAGCAAGAATGGCAGAATTTTCTTTGATGATTATGTCGCTTGCTGTGTGAAGCTTCGAGGATTGACAGAATTCTTTAGGAGAAGAGATCACTTGCAACAAGGGTGTGTGAATTTCATATATGAAGATGTGAGTATCTTGTTTAACATTTTGATATTTATACTGTATTCTGCAGTATATTCTTATATACCTATTCTTAGGTATCAGAAAGTTCAGTGA

Related Sequences

XP_004835910.1 Protein

Gca PREDICTED: grancalcin isoform X3 [Heterocephalus glaber]

Length: 221 aa     
>XP_004835910.1
MQMGQPVPRAGPNFYPGGYQPGHTVYMGSYSSADDSMWTYFTAIAGQDGEVDAEELQRCLTQSGISGTYSPFSLETCRIMIAMLDRDYTGKMGFNEFKELWAALNAWKQNFMTFDQDRSGSVEHHELSQAIAVMGYRLSTQTLNAIVKRYSKNGRIFFDDYVACCVKLRGLTEFFRRRDHLQQGCVNFIYEDVSILFNILIFILYSAVYSYIPILRYQKVQ