Sequence details NCBI ID: XM_004835827.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gcsam
Gene Name germinal center-associated, signaling and motility
Entrez Gene ID 101700094

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GCSAM ENSG00000174500 (Human)

Gene Details

germinal center-associated, signaling and motility

External Links

Gene Match (Ensembl Protein ID: ENSP00000419485, Human)

Protein Percentage 50.84%
CDS Percentage 66.11%
Ka/Ks Ratio 0.51157 (Ka = 0.3941, Ks = 0.7704)

Gcsam ENSMUSG00000022659 (Mouse)

Gene Details

germinal center associated, signaling and motility

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000123853, Mouse)

Protein Percentage 43.65%
CDS Percentage 60.22%
Ka/Ks Ratio 0.45277 (Ka = 0.5007, Ks = 1.1059)

Gcsam ENSRNOG00000022110 (Rat)

Gene Details

Protein Gcsam

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000041206, Rat)

Protein Percentage 45.6%
CDS Percentage 60.26%
Ka/Ks Ratio 0.40187 (Ka = 0.4715, Ks = 1.1733)

Genome Location

Sequence Coding sequence

Length: 747 bp    Location: 36444290..36450275   Strand: +
Raw sequence   
>XM_004835827.1
ATGATTGATGGGCATCAACTCCTTCATGAGAAGAGGTCAGATTTCAGAGCGAGGAATCTGCCAAATAAAACCTACCCTCTCCCCTCACCAGTTGCAGATCCTCAGATTTTGGACTGCACAAAAACAGATAATGACAGCCGAGGAGAACAAGCTTTTCTCTGTGACACTGATATTCTTAGGGTTATGATGAAGATTCTCGGACATTTGGGAACAAATGATTTGTTTGAGGTGTATGTCTGCTTTCAGAGAAAATCAGTGGGCTGTTCCTGTGGCAGTCAAGACACTCAAGAGATGCCTTGGAATCTGAGGCTCCAAAATGCCAAACAAAGAACATCAAGGAAAAGAATACATATTTTTAAAGCAAGCCAGGATTCCCAAAAGGAAAGTAAAGGAACAACATCTTCTCCCACCAAGGATGGTGGTAACCAGATCTATGAGGATGAAGTGTGCTACGTCCTTATCAATCATAAGGCCCCGGGGAGGAAGCCATTGGGGAACTCTACTGAAGAGGAGGTTATCGGAGAACTCTATGAGAACATCCCCTGCAAGTCTAACAGGCCCAGGGAGTCTCTGGGAGGCACTGAGACAGAGTATTCACTTCTCCGTGTGTCTGCCACCCCGAAGAATTCACCTTGCCCAGAAGACGAATATGAACTTCTCATACCTAGCAGAGTCTCCTCTCCTTCCCTCCAACAGCCAGGGCTACGTATGGTCCCTTCTGAGACTCAGTCTTTTTGTTTACAGTGA

Related Sequences

XP_004835884.1 Protein

Gcsam PREDICTED: germinal center-associated signaling and motility protein [Heterocephalus glaber]

Length: 248 aa      
>XP_004835884.1
MIDGHQLLHEKRSDFRARNLPNKTYPLPSPVADPQILDCTKTDNDSRGEQAFLCDTDILRVMMKILGHLGTNDLFEVYVCFQRKSVGCSCGSQDTQEMPWNLRLQNAKQRTSRKRIHIFKASQDSQKESKGTTSSPTKDGGNQIYEDEVCYVLINHKAPGRKPLGNSTEEEVIGELYENIPCKSNRPRESLGGTETEYSLLRVSATPKNSPCPEDEYELLIPSRVSSPSLQQPGLRMVPSETQSFCLQ