Details from NCBI annotation

Gene Symbol Scn10a
Gene Name sodium channel, voltage-gated, type X, alpha subunit
Entrez Gene ID 101724114

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCN10A ENSCPOG00000013968 (Guinea pig)

Gene Details

sodium channel, voltage-gated, type X, alpha subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019396, Guinea pig)

Protein Percentage 85.79%
CDS Percentage 87.4%
Ka/Ks Ratio 0.26543 (Ka = 0.0894, Ks = 0.3369)

SCN10A ENSG00000185313 (Human)

Gene Details

sodium channel, voltage-gated, type X, alpha subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000390600, Human)

Protein Percentage 85.51%
CDS Percentage 87.41%
Ka/Ks Ratio 0.22312 (Ka = 0.0806, Ks = 0.3611)

Scn10a ENSMUSG00000034533 (Mouse)

Gene Details

sodium channel, voltage-gated, type X, alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000081845, Mouse)

Protein Percentage 82.02%
CDS Percentage 82.61%
Ka/Ks Ratio 0.16118 (Ka = 0.1063, Ks = 0.6598)

Scn10a ENSRNOG00000032473 (Rat)

Gene Details

sodium channel, voltage-gated, type X, alpha subunit (Scn10a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047944, Rat)

Protein Percentage 82.93%
CDS Percentage 82.72%
Ka/Ks Ratio 0.14134 (Ka = 0.1011, Ks = 0.7156)

Genome Location

Sequence Coding sequence

Length: 5853 bp    Location: 2254445..2355738   Strand: +
>XM_004835790.1
ATGGAATTCCCCTTTGGGTCCCTGGAAACTACCAACTTCCGGCGGTTCACTCCGGAGTCACTGGCTGAGATTGAGAAGCAAATTGCTGCCCACCGGGCAGAAAAGGAAGTCAGAGATAAACACAGGGAGCAGAAGAACGAAGAAGAGAAACCTCGGCCCCAGCTGGACTTGAAGGCCTGCAATCAGCTGCCCAAATTCTATGGTGAGCTCCCAGCAGAACTGGTCGGGGAGCCCCTGGAGGATCTAGACCCTTTCTACAGCACACACCGGACATTTATGGTGCTGAACAAAGGGAGGACCATTTCCCGGCTTAGTGCCACTCAGGCTCTATGGCTTTTCAGTCCCTTCAACCTTATCAGAAGATCAGCCATCAAAGTGTCTGTCCACTCATATCCTTTGTGGTTCACTTCATTTATTACATTCACTATTGTGGCCAATTGTGTGTGCATGACTCGAAGTGATCTTCCAGAGAAAATTGAGTATGTCTTCACTGTCATTTACACCTTCGAAGCCTTGATAAAGATACTGGCAAGAGGGTTTTGTCTGAATGAGTTCGCCTACCTGCGAGATCCCTGGAACTGGCTAGACTTTAGCGTCATTACCCTGGCGTATGTCGGCACGGCAACAGAACTGAAAGGATTCTCAGGCTTGAGGACATTCAGAGTTCTTAGAGCTTTAAAAACAGTTTCTGTGATCCCAGGGCTGAAGGTCATTGTGGGGGCTTTGATCCACTCGGTAAGGAAGCTGACTGATGTGACCATCCTCACTGTCTTCTGCCTGAGTGTCTTTGCCCTGGTGGGCCTGCAGCTCTTCAAGGGCAACCTCAAGAACAAATGCATCAGGAATGGCACAACTGTCCTGCAGGCCCCCAATTGTTCATCTAGAATGTACGAGTATGCTACTAAGCCGGGCACTTCTGATCCCTTACTGTGTGGCAACGGAACTGGCGCAGGCCTGTGCCCTGATGGTTATGTCTGCCTCAAAACCTGTGACAACCCAGACTTTAACTACACCAGCTTTGATTCCTTTGCTTGGGCTTTCCTCTCCCTGTTCCGCCTCATGACGCAGGACTCCTGGGAACGCCTCTACCAGCAGACCCTCAGGGCCTCCGGAAAAATGTACATGGTCTTTTTCGTGATTGTCATCTTCCTGGGATCCTTCTACCTGGTCAACTTGATCCTGGCTGTGGTCACCATGGCGTACGAAGAGCAGAACCAGGCCACCATTGCTGAAATTGAAGCAAAGGAGAAGAAGTTCCAGGAGGCCCTGGAGATGCTCCGGAAGGAGCAAGAGGTCCTGGCAGCGCTGGGGATGGACACAGCCTCTCTGCATTCCCACAGTGGGTCCCCATTAGCCTCTAAAAGTGCTGGTGAGAGAAGGCATGGAATGAAGTCAAGAGTGTCAGAGGGCTCCACTGAAGATAGCAAATCACCCCAGTCAGAGCCTTACAACCAGCGCAGGATGTCTTTCCTAGGCCTTACTTCCGGGAGACGCCGTGCCAGCCATGGTAGTGTATTCCACTTCCGAGCCCCTGGCCGAGATGTCTCATTCCCTGATGGGATCACAGATGATGGAGTCTTTCATGGAGACCACGAAAGCCATCGGGACTCCCTGATGCTGGGCAGGAGTGCTAGACAGCAAGGCCCCTTCCTCAGGAGCCCACTGCCTCAGCCCCCTAACCCTGGCTCCCAGCATGGAGAAGAGGGACCCCCCACACTGCCCACTGTGGAGCTTCCCCCTGGAGCCACTGAAGTCTCGGCATTTGATTCGGGACAAAGGAAGTCTTTCTTGTCAACAGAATACTTGAATGAACCCTTCCGAGCCCAGAGAGCAATGAGTGTCGTCAGTATCATGACTTCCGTCATCGAGGAACTCGAGGAGTCTGAACACAGGTGGCCACCCTGCCTGACCAGTTTGGCTCAGAAGTATCTGATCTGGGAGTGCTGCCCCACATGGGTAAAGCTCAAGGCAGTTCTCTTTGAGCTGGTGACAGACCCCTTCGCAGAGCTCACCATCACCCTGTGCATCGTGGTCAACACAGTCTTCATGGCCATGGAGCACCATGGCATGAGCTCCGCCTTCGAAACCATGCTGCAGATTGGCAACATCGTCTTTACCATATTTTTTACTGCTGAAATGGTCTTCAAAATCATTGCCTTCGACCCCTACTATTACTTCCAGAAGAAGTGGAATATCTTCGACTGCATCATCGTCACTGTGAGCCTGCTGGAGCTGAGTGTGGTCAGGAAGGGAAGCCTGTCTGTGCTGCGGACCTTCCGCTTGCTGCGAGTCTTCAAGCTGGCCAAGTCCTGGCCCACCCTGAACACACTCATCAAGATCATCGGCAACTCGGTGGGGGCTCTGGGGAACCTGACCATCATCCTGGCCATCATTGTCTTCATTTTCGCCTTGGTTGGCAAGCAGCTCCTCGGGGAGGCCTACTTCACCCAACAGGCAAAGCTGACGTTGCCGGGTGACAGGGAGCCCCGCTGGCACATGATGGACTTCTTTCACTCCTTCCTCATCATCTTCCGGATCCTCTGTGGGGAGTGGATCGAGAACATGTGGGCCTGCATGGAAGTTAGCGAGAAACCCATATGCCTCATCCTTTTCTTGACCGTGATGGTACTAGGGAACCTGGTGGTGCTCAACCTGTTCATTGCCTTGCTGCTGAACTCTTTCAGTGCCGACAACCTCACAGCACCTGAGGACGACGGGGAGGTGAACAACCTGCAGGTGGCCCTGGCACGCCTCCAGGTGTTTGGCCGCCAAACCAGGCAGGCCCTTCGAAGCTTCTTCCGCAGGCCCTGCCTGCTCCCTAGGCCCAAGGTGGAGCCACAGCTGGCAGCAAAATCCCCACTCTCCAGCCCCAAGGCTGAGAACCACATTGCTGCCGAGGCTGCTCCAGGAAGCCCCAGAGCACTGCCACTTCTCAGAGGCCACAGGGATGAGCACAGTGACCTTATCGCTGATCCTAACTTGTGGGTCTCTGTGCCCATTGCGGAGGGCGAATCTGACCTCGATGACTCAGAGGATGATGGAGAGCAGGGTGCTCCAAGCTCATGGCAGGAAGTGACCCCGGAAGGACAGGAGCAGCTACAGCAAGCTGGGAGGCATGAGGACTACCTGACACCCAGGAGCCCAGGCTCTGGGACATCCTCTGAGGACCTGGCTCCATACCTGGGTGAGAAGTGGAAAGGCAAGGGTGCTCCCCCAGTTCCTGCAGAGGGGGTGGATGATACAAGCTCCTCTGAGGGCAGCACGGTGGACTGCCCAGATCCTGAGGAGATCCTGAGGAAGATCCCGGAGCTGGCAGATGACCTGGAAGAACCCGATGACTGCTTCACAGAAGGCTGCCTTCGCCACTGTCCCTGCTGCAAAGTGAATACTACCAAGTTTCCATGGGCCATGGGCTGGCAGTTGCGTAAGACCTGCTATCGCATCGTGGAGCACAGCTGGTTTGAGAGCTTTATCATCTTCATGATCCTGCTCAGCAGTGGGTCTCTGGCCTTTGAAGACTGTTACCTGGACCAGAAGCCCACAGTGAAGGCCCTGCTGGAGTACGCTGACAGGGTGTTCACCTTCATCTTTGTGTTTGAGATGCTGCTCAAGTGGGTGGCCTATGGCTTCAAAAAATACTTCACCAATGCCTGGTGCTGGCTGGACTTCCTCATTGTGAATATCTCACTGATAAGCCTCATAGCGAAGATCCTGAAATATTCTGATATGGAGTCCATCAAAGCCCTTCGGACCCTCCGCGCCCTGCGGCCCCTAAGGGCTCTGTCTCGATTCGAAGGCATGCGGGTGGTGGTGGATGCCCTGGTAGGTGCCATCCCATCCATCGTGAATGTCCTCCTTGTCTGCATCATCTTCTGGCTCATCTTCAGCATCATGGGCGTGAACCTCTTTGCGGGGAAGTTTGGGAGGTGCATCAACCACACCAATGGAGAATTTGATCTTGTGAACTGGACAGTTGTGAATAACATGACTGAATGTGAGAATCAAAACTATACTGGCAGCTTCTTCTGGGTCAATGTGAAAGTCAACTTTGATAATGTTATGATGGGTTACCTCGCACTTCTTCAGGTGGCAACCTTTAAAGGCTGGATGGACATTATGTATGCAGCTGTCGATTCCCGAGAAGTCAACAGTCAGCCCAAGTGGGAGGACAACGTGTACATGTACTTGTACTTTGTCATCTTCATCATTTTTGGTGGCTTCTTCACACTGAATCTCTTTGTTGGGGTCATAATTGACAACTTCAATCAACAGAAAAAAAAGTTAGGGGGCCAGGACATCTTCATGACAGAGGAGCAGAAGAAGTACTACAATGCCATGAAGAAATTGGGCTCCAAGAAGCCCCAGAAGCCCATCCCTCGGCCCCTGAACAAGTACCAGGGCTTTCTCTTTGACATCGTGACTAGGCAAGCTTTTGACGTCAGCATTATGGTCCTCATTTGCCTCAACATGATCACCATGATGGTGGAGACGGACGACCAGAGTAAAGAAAAGACAAGAGTTCTAGGCAAAATCAACCAGTTCTTTGTGGCTGTATTCACGGGCGAGTGTGTCCTGAAGATGTTTGCCTTAAGGCATTACTACTTCACCAACGGCTGGAACGTGTTCGACTTCATCGTGGTTTTCCTCTCCATTGGGAGTTTGATATTTTCTGCAATTCTTACATCACTTGAAGGTTACTTCTCCCCAACGCTCTTCCGAGTCATCCGCCTGGCCCGAATTGGCCGCATCCTTAGACTGATCCGGGCAGCCAAGGGGATCCGTACGCTGCTCTTCGCCCTCATGATGTCCCTGCCTGCACTCTTCAACATAGGGCTGCTGCTCTTCCTTGTCATGTTCATCTACTCTATCTTTGGGATGTCCAGCTTTCCCCATGTGAAGGAGGAGGCTGGCATTGATGACATGTTCAACTTCAAGACCTTTGCCAACAGCATGCTGTGCCTCTTCCAGATCACCACATCAGCTGGCTGGGATGGCCTCCTCAGCCCCATCCTCAACACAGGGCCCCCCTTCTGCAATGGCACAAGAGGAGACTGTGGGAGCCCAGCTGTGGGCATCCTCTTCTTCACCACCTACATCATCATCTCCTTCCTCATCGTGGTCAACATGTACATTGCAGTGATTCTGGAGAATTTCAATGTAGCCACAGAGGAGAGCACAGAGCCCCTGAGTGAAGATGACTTTGACATGTTCTATGAGACCTGGGAGAAGTTTGACCCAGAGGCCACCCAGTTCATTACCTTTTCTGCCCTCTCAGACTTTGCAGACACCCTCTCTGGCCCTCTGCAAATCCCAAAACCAAATCAGAATATATTAATCCAGATGGACCTGCCCTTGGTCCCTGGAGATAAGGTCCACTGCCTGGACATCCTTTTTGCTTTCACCAAGAAGGTGCTGGGAGAATCTGGGGAGTTGGACACTCTGAAAGCAAATATGGAAGAGAAATTTATGGCAACTAATCTTTCAAAGGCATCCTATGAGCCAATAGCAACCACCCTCCGGTGGAAGCAAGAAGACATTTCAGCCACTGTCATTCAAAAGGCCTACCGGAGCTATATGCAGCATCACTCCTTGGTACTCTCCAACTCCTCTGGTGTGCCTAGGGTTGAGGAGGATGCTGAGTCACTTCCAGATGAAGGTTTTGTTGCATTAATGGCAAATGAAAATTATGTGCTCCCAGATGAATCTGAAACTGCATCTGCCACATCTTTCCCACCATCCTATGACAGTGTCACTAGAGGCCTTAATGGCAGAGTCAACATGAGCACATCTAGCTCAATGCAAAATGAAGATGAAGCCATGAGTAAGGAGGCAACTGCCTCTGGACTTCAGTGA

Related Sequences

XP_004835847.1 Protein

Scn10a PREDICTED: sodium channel protein type 10 subunit alpha [Heterocephalus glaber]

Length: 1950 aa      View alignments
>XP_004835847.1
MEFPFGSLETTNFRRFTPESLAEIEKQIAAHRAEKEVRDKHREQKNEEEKPRPQLDLKACNQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRLSATQALWLFSPFNLIRRSAIKVSVHSYPLWFTSFITFTIVANCVCMTRSDLPEKIEYVFTVIYTFEALIKILARGFCLNEFAYLRDPWNWLDFSVITLAYVGTATELKGFSGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLTDVTILTVFCLSVFALVGLQLFKGNLKNKCIRNGTTVLQAPNCSSRMYEYATKPGTSDPLLCGNGTGAGLCPDGYVCLKTCDNPDFNYTSFDSFAWAFLSLFRLMTQDSWERLYQQTLRASGKMYMVFFVIVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEAKEKKFQEALEMLRKEQEVLAALGMDTASLHSHSGSPLASKSAGERRHGMKSRVSEGSTEDSKSPQSEPYNQRRMSFLGLTSGRRRASHGSVFHFRAPGRDVSFPDGITDDGVFHGDHESHRDSLMLGRSARQQGPFLRSPLPQPPNPGSQHGEEGPPTLPTVELPPGATEVSAFDSGQRKSFLSTEYLNEPFRAQRAMSVVSIMTSVIEELEESEHRWPPCLTSLAQKYLIWECCPTWVKLKAVLFELVTDPFAELTITLCIVVNTVFMAMEHHGMSSAFETMLQIGNIVFTIFFTAEMVFKIIAFDPYYYFQKKWNIFDCIIVTVSLLELSVVRKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTIILAIIVFIFALVGKQLLGEAYFTQQAKLTLPGDREPRWHMMDFFHSFLIIFRILCGEWIENMWACMEVSEKPICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAPEDDGEVNNLQVALARLQVFGRQTRQALRSFFRRPCLLPRPKVEPQLAAKSPLSSPKAENHIAAEAAPGSPRALPLLRGHRDEHSDLIADPNLWVSVPIAEGESDLDDSEDDGEQGAPSSWQEVTPEGQEQLQQAGRHEDYLTPRSPGSGTSSEDLAPYLGEKWKGKGAPPVPAEGVDDTSSSEGSTVDCPDPEEILRKIPELADDLEEPDDCFTEGCLRHCPCCKVNTTKFPWAMGWQLRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDCYLDQKPTVKALLEYADRVFTFIFVFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLISLIAKILKYSDMESIKALRTLRALRPLRALSRFEGMRVVVDALVGAIPSIVNVLLVCIIFWLIFSIMGVNLFAGKFGRCINHTNGEFDLVNWTVVNNMTECENQNYTGSFFWVNVKVNFDNVMMGYLALLQVATFKGWMDIMYAAVDSREVNSQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFLFDIVTRQAFDVSIMVLICLNMITMMVETDDQSKEKTRVLGKINQFFVAVFTGECVLKMFALRHYYFTNGWNVFDFIVVFLSIGSLIFSAILTSLEGYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSSFPHVKEEAGIDDMFNFKTFANSMLCLFQITTSAGWDGLLSPILNTGPPFCNGTRGDCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLQIPKPNQNILIQMDLPLVPGDKVHCLDILFAFTKKVLGESGELDTLKANMEEKFMATNLSKASYEPIATTLRWKQEDISATVIQKAYRSYMQHHSLVLSNSSGVPRVEEDAESLPDEGFVALMANENYVLPDESETASATSFPPSYDSVTRGLNGRVNMSTSSSMQNEDEAMSKEATASGLQ