Details from NCBI annotation

Gene Symbol Cd47
Gene Name CD47 molecule, transcript variant X1
Entrez Gene ID 101712296

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CD47 ENSCPOG00000008097 (Guinea pig)

Gene Details

CD47 molecule

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007280, Guinea pig)

Protein Percentage 88.79%
CDS Percentage 89.72%
Ka/Ks Ratio 0.31089 (Ka = 0.0756, Ks = 0.2432)

CD47 ENSG00000196776 (Human)

Gene Details

CD47 molecule

External Links

Gene Match (Ensembl Protein ID: ENSP00000355361, Human)

Protein Percentage 75.7%
CDS Percentage 82.97%
Ka/Ks Ratio 0.49585 (Ka = 0.1654, Ks = 0.3336)

Cd47 ENSMUSG00000055447 (Mouse)

Gene Details

CD47 antigen (Rh-related antigen, integrin-associated signal transducer)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099853, Mouse)

Protein Percentage 78.55%
CDS Percentage 80.64%
Ka/Ks Ratio 0.24063 (Ka = 0.1387, Ks = 0.5763)

Cd47 ENSRNOG00000001964 (Rat)

Gene Details

Cd47 molecule (Cd47), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050938, Rat)

Protein Percentage 78.64%
CDS Percentage 78.53%
Ka/Ks Ratio 0.2086 (Ka = 0.1488, Ks = 0.7135)

Genome Location

Sequence Coding sequence

Length: 966 bp    Location: 41461213..41508558   Strand: +
>XM_004835763.1
ATGTGGCCCTTGGCGGCGACGCTGCTGCTGGGCTCTTGGTGCTTTGGTTCAGCTCAACTCCTATTAAATAAGACCAAATTTGTAGAATACACCATTTGTAATGAAACTGTTGTCATCCCATGCTTTGTTATTAATGTCGGGGCGCAAAGCACAAAGGAAGTGTTTGTAAAGTGGAAATTTAATGGAACATATATTTTCATCTATGATGGAAATAAAAACATTTCTACTGCAAACCTGAACTTTTCAAGTGCAAAAATCGCAGTCTCAAAATTACTAAAAGGAGACGCCTCTTTGAAGATGAGTAAGGATGATGTGAAAGTAGGAAACTACACATGTGAAGTAACAGAATTAACCAGAGAAGGAGAAACAATCATAGAAGTAAAGTATCGTATGGTTTCATGGTTTTCTCCAAATGAAAATATTCTCATTGTTATTTTCCCAATTTTGGCCATACTTCTGTTCTGGGGACAATTTGGTATTTTAACACTTAAATATAAGTCCAATTGTACAAGTACGAAAATCATTCTTTTACTTATTGCTGGACTACTGCTCACTATAATTGTCATCGTTGGAGCCATTCTTTTCATCCCAGGAGAATATTCAATAAAGAATTCTTTTGGACTTGGTTTCATTGTAATTTCTACAGGGATATTAATATTACTTCAGTACAATGTGTTTATGACAGCTTTTGGGATGACCTCTTTCACCATCGCCATACTGATCACTCAGGTGCTGGGCTATGTACTTGCTGTGGTTGGACTCTGTCTCTGTGTCACAGCATGTGTGCCAGTACATGGTCCTCTTCTGATTTCAGGTTTGGGTATCATAGCTCTAGCGGAATTACTTGGACTAGTTTATATGAAATTTGTGGCCTCCAATCAGAGGACTATACAACCTCCTAGGAAAGCTGTAGAGGAACCCCTTAATGCATTTAAAGAATCAAAAGGAATGATGAATGAGGAATAA

Related Sequences

XP_004835820.1 Protein

Cd47 PREDICTED: leukocyte surface antigen CD47 isoform X1 [Heterocephalus glaber]

Length: 321 aa      View alignments
>XP_004835820.1
MWPLAATLLLGSWCFGSAQLLLNKTKFVEYTICNETVVIPCFVINVGAQSTKEVFVKWKFNGTYIFIYDGNKNISTANLNFSSAKIAVSKLLKGDASLKMSKDDVKVGNYTCEVTELTREGETIIEVKYRMVSWFSPNENILIVIFPILAILLFWGQFGILTLKYKSNCTSTKIILLLIAGLLLTIIVIVGAILFIPGEYSIKNSFGLGFIVISTGILILLQYNVFMTAFGMTSFTIAILITQVLGYVLAVVGLCLCVTACVPVHGPLLISGLGIIALAELLGLVYMKFVASNQRTIQPPRKAVEEPLNAFKESKGMMNEE