Details from NCBI annotation

Gene Symbol Atp6v1a
Gene Name ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
Entrez Gene ID 101717344

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP6V1A ENSCPOG00000012578 (Guinea pig)

Gene Details

ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011315, Guinea pig)

Protein Percentage 97.49%
CDS Percentage 94.58%
Ka/Ks Ratio 0.07003 (Ka = 0.0126, Ks = 0.1795)

ATP6V1A ENSG00000114573 (Human)

Gene Details

ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A

External Links

Gene Match (Ensembl Protein ID: ENSP00000273398, Human)

Protein Percentage 97.15%
CDS Percentage 92.07%
Ka/Ks Ratio 0.04571 (Ka = 0.0142, Ks = 0.31)

Atp6v1a ENSMUSG00000052459 (Mouse)

Gene Details

ATPase, H+ transporting, lysosomal V1 subunit A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000110314, Mouse)

Protein Percentage 96.65%
CDS Percentage 87.27%
Ka/Ks Ratio 0.02523 (Ka = 0.0165, Ks = 0.6532)

Genome Location

Sequence Coding sequence

Length: 1797 bp    Location: 34780670..34721157   Strand: -
>XM_004835701.1
ATGATGGATTTCTCCAAACTACCCAAGATACTTGATGAAGAGAAAGAAAGTACATTTGGTTATGTGCATGGGGTCTCAGGACCTGTTGTTACAGCCTGTGACATGGCAGGTGCAGCCATGTATGAGCTGGTGAGAGTGGGCCACAGCGAGTTGGTTGGAGAGATTATTCGGTTGGAAGGTGATATGGCTACTATTCAGGTGTACGAAGAAACCTCTGGTGTGTCTGTTGGAGACCCTGTACTCCGCACTGGTAAACCACTCTCAGTAGAGCTTGGTCCTGGCATTATGGGAGCCATTTTTGATGGTATTCAAAGGCCTTTGTCGGATATCAGCAATCAAACCCAAAGTATCTACATCCCAAGAGGAGTAAATGTGTCTGCCCTTAGCAGAGATATCAAATGGGATTTTACACCGTGCAAAAACTTACGGGTTGGCAGTCATATCACTGGTGGAGATATTTATGGAATTGTGAATGAGAACTCACTCATCAAACACAAAATCATGTTACCTCCCCGAAATAGAGGAACTGTAACTTACATTGCTCCACCTGGGAATTATGATGCCTCTGATGTAGTCTTGGAGCTTGAATTTGAAGGTGTAAAGGAGAAGTTCAACATGGTCCAGGTATGGCCTGTCCGCCAAGTTCGGCCTGTCACCGAAAAGCTGCCAGCCAACCATCCTTTGCTGACTGGCCAGCGAGTCTTGGATGCCCTTTTTCCGTGTGTACAGGGAGGAACAACGGCTATCCCTGGGGCTTTTGGCTGTGGAAAGACAGTAATATCACAGTCTCTGTCCAAATATTCTAACAGTGATGTGATCATCTATGTAGGATGTGGTGAAAGAGGAAATGAGATGTCTGAAGTTCTCCGGGACTTCCCAGAGCTCACTATGGAAGTTGATGGTAAGGTAGAGTCAATTATGAAGAGGACAGCTTTGGTAGCCAATACCTCCAATATGCCGGTCGCTGCTAGAGAAGCCTCTATTTATACTGGAATTACACTGTCAGAATATTTCCGTGACATGGGTTACCATGTCAGTATGATGGCTGACTCTACCTCCAGATGGGCTGAGGCCCTTAGAGAAATTTCTGGTCGCTTAGCTGAAATGCCTGCAGATAGTGGCTATCCTGCATATCTTGGTGCCCGTCTGGCCTCTTTCTATGAGCGAGCAGGCAGAGTGAAGTGTCTTGGAAATCCTGAAAGAGAAGGGAGTGTCAGCATTGTAGGAGCAGTTTCTCCACCTGGTGGTGATTTTTCTGATCCAGTTACATCTGCTACTCTTGGTATTGTTCAGGTGTTCTGGGGTTTAGATAAGAAACTGGCTCAACGTAAGCATTTCCCCTCGGTCAACTGGCTCATCAGCTACAGCAAATACATGCGGGCCTTGGATGAGTATTATGACAAACACTTCACAGAGTTTGTTCCTCTGAGGACCAAAGCTAAGGAAATTCTGCAGGAAGAAGAAGACCTGGCAGAAATTGTACAGCTTGTGGGAAAGGCTTCATTAGCAGAAACCGATAAAATCACTCTAGAGGTAGCAAAACTTATCAAAGATGACTTCCTGCAACAAAATGGATATACTCCTTATGACNNNNNNNNNCCATTCTACAAGACAGTAGGAATGCTGTCCAACATGATTGCATTTTATGACATGGCTCGTAGAGCTGTTGAGACCACTGCCCAGAGTGACAATAAAATCACATGGTCTATTATCCGTGAGCACATGGGGGAGATACTCTACAAACTTTCCTCCATGAAATTCAAGGTATGTTTTGTTTCTGCTTTAACTTTAAAGTAG

Related Sequences

XP_004835758.1 Protein

Atp6v1a PREDICTED: V-type proton ATPase catalytic subunit A [Heterocephalus glaber]

Length: 598 aa     
>XP_004835758.1
MMDFSKLPKILDEEKESTFGYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSDISNQTQSIYIPRGVNVSALSRDIKWDFTPCKNLRVGSHITGGDIYGIVNENSLIKHKIMLPPRNRGTVTYIAPPGNYDASDVVLELEFEGVKEKFNMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDXXXPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGEILYKLSSMKFKVCFVSALTLK