Details from NCBI annotation

Gene Symbol Lsamp
Gene Name limbic system-associated membrane protein, transcript variant X2
Entrez Gene ID 101709306

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LSAMP ENSCPOG00000015654 (Guinea pig)

Gene Details

limbic system-associated membrane protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014118, Guinea pig)

Protein Percentage 98.61%
CDS Percentage 95.25%
Ka/Ks Ratio 0.06315 (Ka = 0.0102, Ks = 0.1607)

LSAMP ENSG00000185565 (Human)

Gene Details

limbic system-associated membrane protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000419000, Human)

Protein Percentage 99.41%
CDS Percentage 94.38%
Ka/Ks Ratio 0.01289 (Ka = 0.0028, Ks = 0.2207)

Lsamp ENSMUSG00000061080 (Mouse)

Gene Details

limbic system-associated membrane protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000077913, Mouse)

Protein Percentage 91.1%
CDS Percentage 87.73%
Ka/Ks Ratio 0.1758 (Ka = 0.0677, Ks = 0.3853)

Lsamp ENSRNOG00000031852 (Rat)

Gene Details

limbic system-associated membrane protein (Lsamp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040165, Rat)

Protein Percentage 98.52%
CDS Percentage 92.7%
Ka/Ks Ratio 0.02724 (Ka = 0.0083, Ks = 0.3052)

Genome Location

Sequence Coding sequence

Length: 1017 bp    Location: 31871791..32544454   Strand: +
>XM_004835679.1
ATGGTCGGAAGAGTGCAGCCGGATCGGAAACAGTTGCCTCTGGTCCTACTGAGATTGCTCTGCCTTCTCCCCACAGGACTGCCCGTTCGAAGCGTGGATTTTAACCGAGGCACAGACAACATCACCGTGAGGCAGGGGGACACGGCCATCCTCAGATGTGTTGTAGAAGACAAGAACTCGAAAGTGGCCTGGTTGAACCGTTCTGGCATCATTTTCGCTGGACATGACAAATGGTCTCTGGATCCCCGGGTTGAGCTGGAGAAACGCCATTCTCTGGAATACAGCCTCCGAATCCAGAAAGTGGATGTCTATGATGAGGGTTCCTACACATGCTCGGTTCAGACACAGCATGAGCCCAAGACCTCCCAAGTTTACTTGATCGTGCAAGTTCCACCAAAGATCTCCAACATCTCCTCGGATGTCACTGTGAATGAGGGCAGCAATGTGACCCTGGTCTGCATGGCCAATGGCCGCCCTGAACCTGTCATTACCTGGAGACACCTTACACCAACTGGCAGAGAAGTTGAAGGAGAAGAAGAATATCTGGAAATCCTTGGCATCACCAGGGAGCAGTCAGGCAAATATGAGTGCAAAGCAGCCAATGAGGTCTCCTCAGCTGACGTCAAACAAGTCAAGGTCACTGTGAACTATCCTCCCACTATTACGGAGTCCAAGAGCAATGAAGCCACCACAGGGCGACAAGCTTCACTCAAATGTGAGGCCTCGGCAGTGCCTGCACCTGACTTTGAGTGGTACCGGGATGACACCAGGATAAACAGTGCTAATGGCCTTGAGATAAAGAGCACCGAGGGGCAGTCCTCCCTGACGGTGACCAATGTCACTGAGGAGCACTATGGCAACTATACTTGCGTGGCTGCCAACAAGCTGGGGGTCACCAATGCCAGCCTAGTCCTTTTCAGACCTGGGTCAGTGAGAGGAATAAACGGATCCATCAGTCTGGCTGTACCACTGTGGCTGCTGGCAGCATCTCTGCTTTGCCTTCTCAGCAAATGTTAA

Related Sequences

XP_004835736.1 Protein

Lsamp PREDICTED: limbic system-associated membrane protein isoform X2 [Heterocephalus glaber]

Length: 338 aa      View alignments
>XP_004835736.1
MVGRVQPDRKQLPLVLLRLLCLLPTGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHSLEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVITWRHLTPTGREVEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFRPGSVRGINGSISLAVPLWLLAASLLCLLSKC