Details from NCBI annotation

Gene Symbol Tmem39a
Gene Name transmembrane protein 39A, transcript variant X2
Entrez Gene ID 101706406

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM39A ENSCPOG00000021971 (Guinea pig)

Gene Details

transmembrane protein 39A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020719, Guinea pig)

Protein Percentage 99.18%
CDS Percentage 95.83%
Ka/Ks Ratio 0.02888 (Ka = 0.0041, Ks = 0.1409)

TMEM39A ENSG00000176142 (Human)

Gene Details

transmembrane protein 39A

External Links

Gene Match (Ensembl Protein ID: ENSP00000326063, Human)

Protein Percentage 98.98%
CDS Percentage 93.31%
Ka/Ks Ratio 0.01945 (Ka = 0.005, Ks = 0.2575)

Tmem39a ENSMUSG00000002845 (Mouse)

Gene Details

transmembrane protein 39a

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002924, Mouse)

Protein Percentage 94.86%
CDS Percentage 89.37%
Ka/Ks Ratio 0.06714 (Ka = 0.0268, Ks = 0.3997)

Tmem39a ENSRNOG00000003075 (Rat)

Gene Details

transmembrane protein 39a (Tmem39a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049087, Rat)

Protein Percentage 91.98%
CDS Percentage 87.24%
Ka/Ks Ratio 0.09939 (Ka = 0.0464, Ks = 0.4672)

Genome Location

Sequence Coding sequence

Length: 1467 bp    Location: 28701901..28773697   Strand: +
>XM_004835671.1
ATGCCCGGTGGAAGGAGGGGCCCTAGTCGGCAGCAGCTAAGCCGTTCAGCTTTACCTTCTTTACAGACTTTGGTTGGTGGGGGTTGTGGCAATGGAACAGGCTTGAGAAACAGGAATGGTAGCGCTATTGGTGTTCCAGTCCCGCCTATCACAGCCTTAATCACCCCAGGTCCTGTTCGTCATTGCCAAATTCCTGACTTGCCTATGGATGGGAGCCTGCTCTTTGAATTTCTGTTTTTCATCTACCTATTGGTTGCTCTGTTCATTCAGTACATTAACATCTATAAAACTGTATGGTGGTATCCCTACAATCACCCTGCATCTTGTACTTCACTGAATTTTCACCTCATTGATTATCACTTGGCAGCGTTCATCACAGTGATGCTGGCGAGGAGGCTTGTCTGGGCTCTCATCTCAGAGGCCACTAAGGCGGGTGCAGCGTCCATGATTCACTACATGGTTCTGATATCAGCTCGCTTGGTGCTGCTTACTTTGTGTGGATGGGTGCTTTGCTGGACCCTTGTCAATCTCTTTCGAAGCCATTCAGTCCTCAATCTCCTCTTCCTTGGCTACCCGTTTGGTGTTTATGTTCCTCTCTGCTGTTTCCACCAAGATAGCAGAGCTCATCTTCTTCTCACCGACTATAACTATGTGGTTCAGCACCAGGTTGTAGAGGAAAGTGCCTCAACTGTGGGTGGCTTGGCCAAATCTAAAGACTTCCTCTCCTTATTATTGGAGTCTCTAAAAGAACAGTTTAATAATGCCACGCCCATCCCCACACACAGCTGCCCCCTGTCTCCAGACCTTATCCGTAATGAAGTAGAATGTCTGAAAGCAGATTTCAACCACAGAATCAAAGAAGTTCTCTTCAACTCTCTCTTCAGTGCCTACTATGTTGCGTTTCTCCCCTTGTGTTTTGTGAAGAGCACCCAGTACTATGACATGCGCTGGTCATGTGAGCACCTTATCATGGTGTGGATCAATGCTTTTGTCATGCTAACCACACAACTACTGCCATCCAAATACTGTGACTTGCTCCATAAATCAGCTGCACACCTGGGCAAGTGGCAGAAGCTGGAACATGGGTCCTACAGCAATGCTCCACAGCACATTTGGTCAGAAAATACAATATGGCCTCAAGGGGTGCTGGTGCGGCACAGCAGATGTTTATATAGAGCCATGGGGCCTTACAACGTGGCAGTGCCTTCAGATGTGTCCCATGCCCGCTTTTATTTCCTGTTTCATCGTCCATTAAGGCTGTTAAATCTACTTATCCTTATCGAGGGCAGTGTCGTCTTCTACCAGCTCTATTCCTTGCTGCGGTCAGAGAAGTGGAACCACACACTCTCCATGGCGCTCATCCTCTTCTGCAATTACTATGTTTTATTTAAGCTCCTCCGAGACAGAATAGTATTAGGCAGGGCATACTCCTACCCACTCAACAGTTATGAACTCAAGGTAAACTAG

Related Sequences

XP_004835728.1 Protein

Tmem39a PREDICTED: transmembrane protein 39A isoform X2 [Heterocephalus glaber]

Length: 488 aa      View alignments
>XP_004835728.1
MPGGRRGPSRQQLSRSALPSLQTLVGGGCGNGTGLRNRNGSAIGVPVPPITALITPGPVRHCQIPDLPMDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVMLARRLVWALISEATKAGAASMIHYMVLISARLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLCCFHQDSRAHLLLTDYNYVVQHQVVEESASTVGGLAKSKDFLSLLLESLKEQFNNATPIPTHSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGSYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRLLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYSYPLNSYELKVN