Details from NCBI annotation

Gene Symbol Popdc2
Gene Name popeye domain containing 2, transcript variant X1
Entrez Gene ID 101704845

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POPDC2 ENSCPOG00000006782 (Guinea pig)

Gene Details

popeye domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006113, Guinea pig)

Protein Percentage 91.03%
CDS Percentage 90.94%
Ka/Ks Ratio 0.17651 (Ka = 0.0479, Ks = 0.2715)

POPDC2 ENSG00000121577 (Human)

Gene Details

popeye domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000264231, Human)

Protein Percentage 79.34%
CDS Percentage 82.64%
Ka/Ks Ratio 0.26354 (Ka = 0.1289, Ks = 0.489)

Popdc2 ENSMUSG00000022803 (Mouse)

Gene Details

popeye domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023494, Mouse)

Protein Percentage 82.88%
CDS Percentage 83.79%
Ka/Ks Ratio 0.18252 (Ka = 0.0995, Ks = 0.545)

Popdc2 ENSRNOG00000002994 (Rat)

Gene Details

popeye domain containing 2 (Popdc2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003999, Rat)

Protein Percentage 82.34%
CDS Percentage 83.79%
Ka/Ks Ratio 0.17781 (Ka = 0.0981, Ks = 0.5518)

Genome Location

Sequence Coding sequence

Length: 1107 bp    Location: 28493462..28521323   Strand: +
>XM_004835665.1
ATGGGCACCAACACCAGCATGGCGGGCCAGCTCCTCTGGCAGGGGCCTGTGTGCATTAGCTGGAAGCAGGATCTGGAAGGGGCTGTTTACCACCTGGCCAACTGCTTCTTGCTCCTGGGCTTCATGGGGGGCAGCGGGGTATATGGATGCTTCTACCTTTTTGGCTTCCTGGGCACGGGCTACCTGTGCTGCGTGCTGTGGGGCTGGTTCAATGCCTGTGGGCTGGACATCATCCTTTGGAGTTTCCTGCTGGCAATGGCCTGCCTGCTCCAGCTGGCACACCTGGTGTACCGTCTGCGTGTGGACACCCTCCCGGAGGAGTTCAATCTCCTCTATAAGACACTATGGCTGCCCCTGCAGGTGCCCCTGCACACCTACAAGGAGATTGTTCTCTGCTGCCAGGAGCAGGTCTTGACTCTGGTCACAGAGCAGACCTATGCCGTGGAGGGGGAGACACCCATCAACCGCCTGTCTCTGCTGCTTTCAGGCCGGGTCCGTGTGAGCCAGGATGGGCAGTTTCTGCACTACATCTTTCCCTACCAGTTCATGGACTCTCCTGAGTGGGAATCGCTGCCGCCCTCCGAGGAAGGCATCTTCCAGGTCACTCTAACTGCCGAGACTGAATGTAGCTACATTTCCTGGCCCCGGAAAAGTCTCCACCATCTTCTGACCAAAGAACGATACATTTCCCGCCTCTTCGCAGTCCTGCTGGGCTATGACATCTCAGAGAAGCTCTACACACTCAATGAGAAGCTTTTTGCTAAGTTTGGACTGCGCTTCGACATCCGCCTCCCCAGCCTCTACCACGTCCTGGGTCCTTCTGCCTCAGATGGAGGGCCGGAGTCCGAGAAGGACGAGGAGGAAGGCTGCGAGCCAGCCACATGCCCCGCTCTGCCGGTGCCCACCTCTGTCCAGCAAAGCCCACCTTGTTCTCCCCCTCCAGCTGCCACCAACTTTCCTGCACCTCTATTCCGGGCCCGGATGTCCAGGCCTGACAGCGGCATCCTGGGTGAGGACTCCACCAGTCTGGTGCTGGAGGATTTTGAGGAAGTGTCAGGATCAGAGTCATTTATGGATTATAGGAGTGATGGGGAGTACATGAGGTGA

Related Sequences

XP_004835722.1 Protein

Popdc2 PREDICTED: popeye domain-containing protein 2 isoform X1 [Heterocephalus glaber]

Length: 368 aa      View alignments
>XP_004835722.1
MGTNTSMAGQLLWQGPVCISWKQDLEGAVYHLANCFLLLGFMGGSGVYGCFYLFGFLGTGYLCCVLWGWFNACGLDIILWSFLLAMACLLQLAHLVYRLRVDTLPEEFNLLYKTLWLPLQVPLHTYKEIVLCCQEQVLTLVTEQTYAVEGETPINRLSLLLSGRVRVSQDGQFLHYIFPYQFMDSPEWESLPPSEEGIFQVTLTAETECSYISWPRKSLHHLLTKERYISRLFAVLLGYDISEKLYTLNEKLFAKFGLRFDIRLPSLYHVLGPSASDGGPESEKDEEEGCEPATCPALPVPTSVQQSPPCSPPPAATNFPAPLFRARMSRPDSGILGEDSTSLVLEDFEEVSGSESFMDYRSDGEYMR