Details from NCBI annotation

Gene Symbol Hcls1
Gene Name hematopoietic cell-specific Lyn substrate 1, transcript variant X1
Entrez Gene ID 101723153

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HCLS1 ENSCPOG00000006399 (Guinea pig)

Gene Details

hematopoietic cell-specific Lyn substrate 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005767, Guinea pig)

Protein Percentage 90.66%
CDS Percentage 89.95%
Ka/Ks Ratio 0.1984 (Ka = 0.0559, Ks = 0.2819)

HCLS1 ENSG00000180353 (Human)

Gene Details

hematopoietic cell-specific Lyn substrate 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000320176, Human)

Protein Percentage 86.37%
CDS Percentage 88.05%
Ka/Ks Ratio 0.24764 (Ka = 0.0785, Ks = 0.317)

Hcls1 ENSMUSG00000022831 (Mouse)

Gene Details

hematopoietic cell specific Lyn substrate 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023531, Mouse)

Protein Percentage 86.95%
CDS Percentage 86.88%
Ka/Ks Ratio 0.18871 (Ka = 0.0773, Ks = 0.4096)

Hcls1 ENSRNOG00000038881 (Rat)

Gene Details

hematopoietic cell specific Lyn substrate 1 (Hcls1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003326, Rat)

Protein Percentage 87.47%
CDS Percentage 86.91%
Ka/Ks Ratio 0.17215 (Ka = 0.0722, Ks = 0.4193)

Genome Location

Sequence Coding sequence

Length: 1434 bp    Location: 26528185..26559108   Strand: +
>XM_004835629.1
ATGTGGAAGTCTGTGGTGGGGCATGATGTATCTGTTTCCGTGGAGACACAGGGTGACGACTGGGACACAGACCCTGACTTTGTGAATGACATCTCCGAGAAGGAGCAACGGTGGGGAGCCAAGACCATCGAAGGCTCTGGACACAAAGAGCACATCAACATCCACCAGCTGAGGAGCAAAGTGTCGGAGGAACACGATGTTCTCAAGAAGAAAGAGATGGAATCAGGGCCCAAAGCCTCCCATGGCTATGGAGGGCGGTTTGGAGTGGAAAGAGACCGAATGGACAAGAGTGCTGTGGGCCACGAGTATGTTGCAGAGGTAGAGAAACACTCTTCGCAGACTGATGCTGCCAAAGGCTTTGGGGGAAAATATGGAGTTGAGAAGGACAGAGCAGATAAATCAGCTGTGGGCTTTGATTACAAAGGAGAAGTGGAGAAGCACGCATCTCAGAAAGATTACTCTCGGGGCTTTGGTGGCCGTTATGGAGTGGAGAAAGATAAAAGGGACAAAGCAGCCTTGGGATATGACTACAAGGGAGAGACGGAGAAACACGAGTCCCAGAAAGATTATGCCAAAGGCTTTGGTGGCCAGTATGGAATCCAGAAGGACCGAGTGGATAAGAGCGCTGTTGGCTTCAGTGAGATGGAGGCCCCAACCACAGCTTATAAGAAGACAACACCCACAGAGGCTGCTTCCAGTGGTGCCCGTGGGCTGAAGGCAAAATTTGAGTCCATGGCTGAGGAGAAGAGGAAGTGTGAAGAAGAGGAGAAGGCACAGCACATGGCCAGGCAGCAACAGGAACGTAAGGCCGTGGTGAAGATGCACCTTGAAGCTCAGCAGCCAGCAGCACCTGTAGAAGAGCAAGTGGTGCCAGCCCCATTGCCCAAGAAAATCTCCTCAGAGGCCTGGCCTCCAGCACAAAGTTATGCACCACCAGAGCCTAAGCCTGTGAGAGCCAGCAGGGAACCAGTGCCCTCCCTGCCCACAAGGCAGGGTCCCCTGGAGGACAATGAGGAGCCCCCAGCTCTGCCCCCTAGGGCTCCAGAAGACTTCCAAGTGGAGCAAGAGCCAGTGTATGAAGCAGCACCTGAGCCTGAGCCCAAGCCTGAGCCTGAGCCTGAAAATGACTATGAGGATGTTGAGGGGATAGACAGGTGTGATGATGAGGCAGAAGGGGACTATGAAGATGTGCTGGAGCCTGAGGATTCTTCTTTTCCTACCACCCAGGCTGGATCATCAGGCAGCCAGGCTGGGGCTCTGGGGATCTCAGCTGTAGCCCTGTATGATTACCAAGGAGAGGGAAGTGATGAGCTTTCTTTTGATCCAGATGACATCATCACTGACATTGAGATGGTGGATGAGGGCTGGTGGCGGGGATGTTGTCGTGGTCACTTTGGACTCTTCCCTGCAAATTATGTCAAGCTCCTCCAGTAA

Related Sequences

XP_004835686.1 Protein

Hcls1 PREDICTED: hematopoietic lineage cell-specific protein isoform X1 [Heterocephalus glaber]

Length: 477 aa      View alignments
>XP_004835686.1
MWKSVVGHDVSVSVETQGDDWDTDPDFVNDISEKEQRWGAKTIEGSGHKEHINIHQLRSKVSEEHDVLKKKEMESGPKASHGYGGRFGVERDRMDKSAVGHEYVAEVEKHSSQTDAAKGFGGKYGVEKDRADKSAVGFDYKGEVEKHASQKDYSRGFGGRYGVEKDKRDKAALGYDYKGETEKHESQKDYAKGFGGQYGIQKDRVDKSAVGFSEMEAPTTAYKKTTPTEAASSGARGLKAKFESMAEEKRKCEEEEKAQHMARQQQERKAVVKMHLEAQQPAAPVEEQVVPAPLPKKISSEAWPPAQSYAPPEPKPVRASREPVPSLPTRQGPLEDNEEPPALPPRAPEDFQVEQEPVYEAAPEPEPKPEPEPENDYEDVEGIDRCDDEAEGDYEDVLEPEDSSFPTTQAGSSGSQAGALGISAVALYDYQGEGSDELSFDPDDIITDIEMVDEGWWRGCCRGHFGLFPANYVKLLQ