Details from NCBI annotation

Gene Symbol Trim9
Gene Name tripartite motif containing 9, transcript variant X3
Entrez Gene ID 101721984

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM9 ENSCPOG00000010456 (Guinea pig)

Gene Details

tripartite motif containing 9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009390, Guinea pig)

Protein Percentage 98.58%
CDS Percentage 95.2%
Ka/Ks Ratio 0.0286 (Ka = 0.0063, Ks = 0.2194)

TRIM9 ENSG00000100505 (Human)

Gene Details

tripartite motif containing 9

External Links

Gene Match (Ensembl Protein ID: ENSP00000298355, Human)

Protein Percentage 98.17%
CDS Percentage 92.82%
Ka/Ks Ratio 0.01961 (Ka = 0.008, Ks = 0.4057)

Trim9 ENSMUSG00000021071 (Mouse)

Gene Details

tripartite motif-containing 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106151, Mouse)

Protein Percentage 98.33%
CDS Percentage 91.12%
Ka/Ks Ratio 0.01442 (Ka = 0.0074, Ks = 0.513)

Trim9 ENSRNOG00000007031 (Rat)

Gene Details

tripartite motif-containing 9 (Trim9), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009559, Rat)

Protein Percentage 98.59%
CDS Percentage 90.42%
Ka/Ks Ratio 0.00936 (Ka = 0.0061, Ks = 0.6522)

Genome Location

Sequence Coding sequence

Length: 2388 bp    Location: 17851116..17969453   Strand: +
>XM_004835548.1
ATGGAAGAGATGGAGGAAGAGTTGAAATGCCCCGTGTGTGGCTCCTTCTACCGGGAGCCCATCATCCTGCCCTGCTCCCACAATCTGTGTCAGGCGTGCGCCCGCAACATCCTGGTGCAGACCCCGGAGTCGGAGCCCCCTCAGAGCCGTCGGGCCTCGGGCTCTGGGGTCTCCGACTATGACTACCTAGATCTGGACAAGATGAGCCTGTACAGCGAGGCGGACAGCGGCTACGGCTCCTACGGGGGCTTCGCCAGCGCCCCTACCACCCCATGCCAGAAGTCCCCCAACGGAGTCCGCGTGTTTCCCCCAGCCATGCCGCCACCGCCCACCCACCTGTCTCCGGCCCTGGCCCCAGTGCCCCGCAACTCCTGTATCACCTGTCCCCAGTGTCACCGCAGCCTCATCCTGGACGACCGGGGGCTCCGCGGCTTCCCCAAAAACCGCGTCTTGGAAGGGGTCATTGACCGCTACCAGCAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTGTGTGAGAAGGCGCCCAAGGAGGCCACCGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGACCCGTGCCGCCTGCGCTGTCACCCGCCCCGAGGGCCGCTGGCCAAGCACCGCCTGGTGCCCCCGGCCCAGGGCCGCGTGAGCCGGAGGCTGAGCCCGCGCAAGGTCTCCACCTGCACCGACCACGAGCTGGAGAACCACAGCATGTACTGCGTGCAGTGCAAGATGCCCGTGTGCTACCAGTGCCTGGAGGAGGGGAAACACTCCAGCCACGAGGTCAAGGCCTTGGGGGCCATGTGGAAACTGCACAAGAGCCAGCTTTCCCAGGCACTGAATGGACTTTCCGACAGGGCCAAAGAGGCCAAGGAGTTTCTGGTGCAGCTCCGCAACATGGTCCAGCAGATCCAGGAGAACAGCGTGGAGTTTGAGGCCTGTCTGGTGGCCCAGTGCGACGCCCTCATCGATGCCCTCAACAGAAGGAAAGCGCAGCTGCTGGCCCGGGTCAACAAGGAGCATGAGCACAAGCTGAAGGTGGTTCGAGATCAGATCTCTCACTGCACAGTGAAATTGCGTCAGACCACAGGTCTCATGGAGTACTGCTTGGAGGTGATTAAGGAAAATGATCCTAGTGGCTTTTTGCAGATTTCTGATGCCCTCATAAGGAGAGTGCACCTGACTGAAGACCAGTGGGGGAAAGGCACGCTCACGCCCAGGATGACCACGGACTTTGACTTGAGTCTGGACAACAGCCCTCTGCTGCAGTCCATTCACCAGCTGGACTTCGTGCAGGTGAAAGCTTCCTCTCCAGTCCCAGCAACCCCCATCCTCCAGCTGGAGGAGTGTTGCACCCACAACAATAGCGCCACACTGTCCTGGAAACAGCCTCCCCTGTCCACGGTGCCCGCCGAAGGGTACATTCTGGAGCTGGATGACGGAAGTGGTGGTCAGTTCCGGGAAGTGTATGTTGGAAAAGAGACAATGTGCACCGTGGATGGCCTTCACTTCAACAGCACATACAACGCTCGAGTCAAGGCCTTCAACAAAACAGGAGTCAGCCTCTACAGCAAGACCCTGGTCCTGCAGACGTCCGAGGACACAGATTCAGAAGAACAGACCCCCCCTTTTCCAGTGCCTTCGGAAAGATTGCCGCTCCGTAGAATGAGTCCTTTCTCCTCCACCCTTAATCTGCAACCCAGCTTCCCTGGGAGATCCTACTTTGATTTCCGGTCCTCACCCCACCAGCTGAGCTTACATTCTTCCTTGCAGTCTCTCAATGCACCGGGATGCAATTTTGAGACACAATCTGCACCTTACTCTCAATTAGTTGACATTAAAAAGCTGTTGGCAGTGGCCTGGTTTGCCTTCGACCCTGGCTCAGCGCACTCCGACATCATCTTCTCCAATGACAACCTGACCGTGACCTGCAGTAGCTACGATGATCGGGTGGTGCTGGGGAAGACCGGCTTCTCCAAGGGTGTCCACTACTGGGAGCTAACAATAGATCGCTATGACAACCACCCCGACCCTGCCTTTGGTGTGGCTCGCATGGATGTGATGAAGGATGTGATGTTAGGAAAGGACGACAAAGCTTGGGCAATGTATGTGGACAATAACCGGAGCTGGTTCATGCACAACAACTCGCACACCAACAGAACAGAGGGAGGGATCACAAAAGGGGCCACAATCGGGGTCCTGCTCGACTTAAATAGGAAAACGTTGACATTTTTCATCAACGATGAACAGCAAGGTCCCATAGCGTTTGAGAACTTGGAAGGCCTGTTCTTCCCCGCCGTCAGCCTGAACAGGAACGTGCAGGTCACGCTTCACACTGGGCTCCCAGTCCCCGACTTCTACTCCAGCAGAGCATCAATAGCCTAA

Related Sequences

XP_004835605.1 Protein

Trim9 PREDICTED: E3 ubiquitin-protein ligase TRIM9 isoform X3 [Heterocephalus glaber]

Length: 795 aa      View alignments
>XP_004835605.1
MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESEPPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPAEGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSLYSKTLVLQTSEDTDSEEQTPPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSAPYSQLVDIKKLLAVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARMDVMKDVMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFINDEQQGPIAFENLEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA