Details from NCBI annotation

Gene Symbol Wdhd1
Gene Name WD repeat and HMG-box DNA binding protein 1, transcript variant X2
Entrez Gene ID 101705065

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

WDHD1 ENSCPOG00000003440 (Guinea pig)

Gene Details

WD repeat and HMG-box DNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003106, Guinea pig)

Protein Percentage 84.35%
CDS Percentage 84.29%
Ka/Ks Ratio 0.17838 (Ka = 0.0905, Ks = 0.5075)

WDHD1 ENSG00000198554 (Human)

Gene Details

WD repeat and HMG-box DNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000353793, Human)

Protein Percentage 84.68%
CDS Percentage 84.45%
Ka/Ks Ratio 0.13854 (Ka = 0.0822, Ks = 0.5937)

Wdhd1 ENSMUSG00000037572 (Mouse)

Gene Details

WD repeat and HMG-box DNA binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107421, Mouse)

Protein Percentage 80.43%
CDS Percentage 80.64%
Ka/Ks Ratio 0.15458 (Ka = 0.1148, Ks = 0.7425)

Wdhd1 ENSRNOG00000011167 (Rat)

Gene Details

WD repeat and HMG-box DNA binding protein 1 (Wdhd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015100, Rat)

Protein Percentage 79.71%
CDS Percentage 80.19%
Ka/Ks Ratio 0.16689 (Ka = 0.1222, Ks = 0.7324)

Genome Location

Sequence Coding sequence

Length: 3375 bp    Location: 14382844..14430055   Strand: +
>XM_004835497.1
ATGCCGGCCACCCAGAAGCCCATGAGGTACGGGCACACGGAAGGACACACGGACGTCTGTTTTGATGACTCTGGCAGTTGTATTGTGACTTGTGGAAGTGATGGCGACGTACGGATTTGGGAAGACTTGGATGACGACGATCCCAAGTCCATCAGCGTTGGCGAGAAGGCATATTCGTGTGCTTTGAAGAACAGAAGGTTGGTCACTGCGGTTTCTAACAATACCGTCCAGGTGCACACGTTTCCGGAAGGGGTTCCCGACGGTATTCTCACACGCTTCACCACCAACGCCAACCACGTGGTCTTCAATGGGGATGGAACCAAAGTTGCCGCTGGATCAGGTGATTTTCTCATCAAAATTGTGGATGTGATGGATAGCAGCCAGCAGAAAACTTTTCGAGGACATGATGCCCCTGTTTTAAGTCTTTCTTTTGATCCTCAAGACATCTTTGTGGCATCAGCTAGTTGTGATGGGTCTGTCAGAGTGTGGAAAATTTCAGATCAGACATGTGCTGTTAGTTGGCCACTGCTACACAAGTGCAACGATGTGATAAATGCAAAATCCATCTGCAGACTTGCTTGGCAGCCGGAAAGCGGGAAGTTACTGGCAGTTCCTGTGGAAAAATCTGTGAAGCTATATAGAAGAGAAACTTGGAGTAATCAATTTGATCTTTCCAATAGTTCCATCTCACAGAGCCTCAATGTGGTAACCTGGTCTCCCTGTGGGCGATATTTAGCTGCCGGTAGTATTAATGGCCTAATTATAGTTTGGAATGTGGAAACCAAAGACTGTGTGGAAAGGGTGAAACATGAGAAAGGTTATGCAATCTGTGGCCTGGCCTGGCACCCTACCTGTGGTCGAATATCTTACACGGACACCGAGGGGAACCTGGGGCTGCTAGAGAATGTGTGTGCGCCCAGCGGGAAGGTATCAGGCAGTAAGGTCTCTAGCAGTGTGGAAAAGGATTACGATGATCTTTTTGATGGAGATGATACCAGCAATATGGGTGACTTTCTCAATGACAAGACAACTGAGACCCCCTCTTTTCCGAGAGGGATTATAAATGATGAAGACGATGATGACCTCATGGTGGCCTCCAGTCGTTCTAGACCGCGAAGTCACATCCTAGAAGATGATGAAAATTCAGTAGACATTACAATGCTGAAGTCTGGTCTGCTCAAAGAGGAGGAGGAGGAGGGGTGGGCAGGGAGCATGCACCACCTCCCGCCGGTGCCGACCCAGAGCCTGCTGTACGAGGGGCCCAGGCCCACACCGAGGCAGAAGCCGTTCCAGCCGGGGTCCACGCCCTCGCAGCTCACCCACAGGTTCATGGTGTGGAACTCTGTTGGAATTATTCGCTGCTATAACGATGAGCAAGACAATGCCATAGATGTGGAGTTCCACGACACCTCCGTGCACCATGCGACACACCTGTCGAACACCTTGAATTACACAGTGGCAGATCTTTCCCACGAAGCTATTTTGTTGGCATGCGAGAGCACTGATGACCTAGCAAGCAAGCTTCACTGCCTGCACTTCAGTTCTTGGGACTCCAGCAAGGAGTGGATGGTGGACATGCCGCAGAAGGAGGATGTCGAAGCCATCTGCCTCGGTCAGGGCTGGGCCGCCGCTGCCACCAGCGCCCTGCTCCTGCGATTGTTCACCATTGGGGGTGTGCAGAATGAGGTCTTCAGTCTGCCAGGGCCCGTGGTGTCACTGGCAGGACACGGAGAGCAGCTTTTCATTGTTTATCACAGAGGTACAGGATTTGATGGAGACCAGTGTCTTGGAGTTCAGCTGTTGGAGCTGGGGAAAAAGAAGAGGCAGATTTTGCGTGGTGATCCTCTTCCCCTCACGAGGAGATCCTACCTCACGTGGCTTGGGTTTTCAGCTGAAGGTACGCCCTGCTATGTGGATTCTGAAGGCTGTGTTCGGATGCTTAACCGAGGGCTGGGGAACACGTGGACGCCCGTGTGTGACACCAGGGAGCACTGCAAGGGGAAGTCCGACCACTACTGGGTGGTGGGGATCCACGAAAACCCCCAGCAGCTTAGGTGCATCCCTTGTAAAGGCTCTCGGTTTCCTCCCACCCTTCCACGCCCTGCGGTGGCTGTGTTGTCCTTTAAGCTTCCTTACTGTCAGATTGCAACAGAGAAAGGACAGATGGAGGAGCAGTTTTGGCGTTCAGTTATATTTCACAACCACCTGGATTACTTAGCCAAGAATGGTTATGAATATGATGAGAGCACTAAAAATCAAGCAGTAAAAGAGCAACAGGAGCTTTTAATGAAAATGCTTGCACTTTCTTGTAAACTGGAGCGAGAATTCCGTTGTGTGGAACTTGCAGATCTAATGACTCAAAATGCTGTAAGTTTAGCCATTAAATATGCTTCTCGCTCTCGGAAATTAATATTGGCCCAAAAACTTAGTGAACTTGCTGTAGAGAAGGCAGCTGAATTGGCAGCATCCGAGGCAGAGGAAGAGGAAGAAGAGGATTTCAGACAGAAGCTGAATGCTGGTTACAGTGGTACTGCCACAGAGTGGAGCCAGCCGAGGCTTCGTAGTCAGGTGGAAGAAGATGTGAGGAACAGAGGAGAAGCTGATGAGACAGAAGAAAATCCCAGACCCCATGAGCATGGACAGAACTCATTTTCCAAAAGTGCAGATTCCTCTGATGTGCCAGCCATTAAGTCAGTTACTCCTAGCAACCAAGGACGAGTAAACCCCTTCAAGGTATTAGCCAATTCCAAAGAGCCAGCCCTGTCTGAGAACTCATCACGTTCAATGAATATTTTAGACAGTATGAGCAAGTCATCCTGGAAGCCCACTGCCCCAGGCCGAGCAGCCGGCAGTGAGAGGTCACCCGTGATCAAGCCCCTGATGCCCAAGCCCAAGTCTAAGCAGGCATCTGCAGCATCCTATTTCCAGAAAAGAACTTCTCAGGCCAATAAGAGCGAGGGAGTGAAAGAGGAAAACCCTAAAGATGCATCCCCTGAAGCCCCCGCTGTGTGCTCTCCACATGCTGAGACCCCGAGGCCAAAGACTGGGTTCCAAATGTGGTTGGAAGAAAATAGAAGTAACATTTTGTCTGACAATCCTGACTTTTCAGATGAAGCAGATATAATAAAAGAAGGAATGATACGCTTTAGAGTTCTGTCTGCTGAAGAAAGGAAGGGGTGGACTAACAAGGCCAAGGGAGAAGCTGCAGGTGCCGGAATTGAAGCAAAGAAGCGGAAACGTGTGGAAGATGAAGGTCACGACAAAGAAAGCCACAAGGAAGCAGCAGAGGAGAATCTGAATTTGCCCAAAAAGCAAAAGCCTTTTGATCTTTCTGCTAATCAGAAGCTGTCAGCCTTTGCTTTTAAGCAGGAGTGA

Related Sequences

XP_004835554.1 Protein

Wdhd1 PREDICTED: WD repeat and HMG-box DNA-binding protein 1 isoform X2 [Heterocephalus glaber]

Length: 1124 aa      View alignments
>XP_004835554.1
MPATQKPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWEDLDDDDPKSISVGEKAYSCALKNRRLVTAVSNNTVQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKVAAGSGDFLIKIVDVMDSSQQKTFRGHDAPVLSLSFDPQDIFVASASCDGSVRVWKISDQTCAVSWPLLHKCNDVINAKSICRLAWQPESGKLLAVPVEKSVKLYRRETWSNQFDLSNSSISQSLNVVTWSPCGRYLAAGSINGLIIVWNVETKDCVERVKHEKGYAICGLAWHPTCGRISYTDTEGNLGLLENVCAPSGKVSGSKVSSSVEKDYDDLFDGDDTSNMGDFLNDKTTETPSFPRGIINDEDDDDLMVASSRSRPRSHILEDDENSVDITMLKSGLLKEEEEEGWAGSMHHLPPVPTQSLLYEGPRPTPRQKPFQPGSTPSQLTHRFMVWNSVGIIRCYNDEQDNAIDVEFHDTSVHHATHLSNTLNYTVADLSHEAILLACESTDDLASKLHCLHFSSWDSSKEWMVDMPQKEDVEAICLGQGWAAAATSALLLRLFTIGGVQNEVFSLPGPVVSLAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKRQILRGDPLPLTRRSYLTWLGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPVCDTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAVLSFKLPYCQIATEKGQMEEQFWRSVIFHNHLDYLAKNGYEYDESTKNQAVKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVSLAIKYASRSRKLILAQKLSELAVEKAAELAASEAEEEEEEDFRQKLNAGYSGTATEWSQPRLRSQVEEDVRNRGEADETEENPRPHEHGQNSFSKSADSSDVPAIKSVTPSNQGRVNPFKVLANSKEPALSENSSRSMNILDSMSKSSWKPTAPGRAAGSERSPVIKPLMPKPKSKQASAASYFQKRTSQANKSEGVKEENPKDASPEAPAVCSPHAETPRPKTGFQMWLEENRSNILSDNPDFSDEADIIKEGMIRFRVLSAEERKGWTNKAKGEAAGAGIEAKKRKRVEDEGHDKESHKEAAEENLNLPKKQKPFDLSANQKLSAFAFKQE