Sequence details NCBI ID: XM_004835487.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lgals3
Gene Name lectin, galactoside-binding, soluble, 3, transcript variant X2
Entrez Gene ID 101702345

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LGALS3 ENSCPOG00000011350 (Guinea pig)

Gene Details

lectin, galactoside-binding, soluble, 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010206, Guinea pig)

Protein Percentage 68.16%
CDS Percentage 72.11%
Ka/Ks Ratio 0.23379 (Ka = 0.2379, Ks = 1.0176)

LGALS3 ENSG00000131981 (Human)

Gene Details

lectin, galactoside-binding, soluble, 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000254301, Human)

Protein Percentage 76.23%
CDS Percentage 73.22%
Ka/Ks Ratio 0.12118 (Ka = 0.1562, Ks = 1.2888)

Lgals3 ENSMUSG00000050335 (Mouse)

Gene Details

lectin, galactose binding, soluble 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000118169, Mouse)

Protein Percentage 78.05%
CDS Percentage 76.02%
Ka/Ks Ratio 0.12124 (Ka = 0.1383, Ks = 1.1404)

Lgals3 ENSRNOG00000010645 (Rat)

Gene Details

lectin, galactoside-binding, soluble, 3 (Lgals3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014216, Rat)

Protein Percentage 74.29%
CDS Percentage 75.24%
Ka/Ks Ratio 0.13623 (Ka = 0.1576, Ks = 1.1572)

Genome Location

Sequence Coding sequence

Length: 741 bp    Location: 14307777..14300172   Strand: -
Raw sequence   
>XM_004835487.1
ATGGCAGACAGCTTCTCGCTCAACGATGCCTTATCCGGTCCTGGACACCAGAACCCTCAAGGATGGCCTGGGGCCGGGGGCTACCCAGGAGCTGGCTATCCTGGCGCCTACCCTGGCCAGGCTCCTCCTGGGGCTTACCCTGGACAGATGGCTCCTGGGGGCTACCCAGGCCAGGCAGCCCCTGGGGCTTATCCCGGGCAGGCACCTGGCGCCTACCCTGGGGCCACACCTGGAGCCTACCCCGGCCCTACTGCACCCAGCACCTACCCTGGGGCTGCACCTGGAGCCTACCCTGGCGCCAGCCCATACGGCGCCCCCTCGGGACCACTGGCCGTGCCCTATGACCTGCTCCTGCCCAGCGGGCTGGTGCCGCGCATGCTCATAACGATTGTGGGCACCGTGAAGCCCAACGCCAACAGACTGGCCCTGGACTTCAAGCGGGGGAACGATGTGGCTTTCCACTTCAACCCACGCTTCAACGAGAACAACAGGCGGGTCATCGTGTGCAACACCAAGCAGAGCAACGCCTGGGGGCGGGAGGAGCGCCTTCAGACTTTCCCCTTCGAGATGGGCAAACAGTTCAAAATCCAAGTGCTGATGGAACCCGACCACTTCAAGGTGGCGGTCAATGACGCCCATCTCATGCAGTACAATCACCGGGTGAGAAACTTCACGGAAATCAACAGACTGGGGATTTCTGGTGACATAACCCTCATCAGCGCGACATACACTATGATATAA

Related Sequences

XP_004835544.1 Protein

Lgals3 PREDICTED: galectin-3 isoform X2 [Heterocephalus glaber]

Length: 246 aa      View alignments
>XP_004835544.1
MADSFSLNDALSGPGHQNPQGWPGAGGYPGAGYPGAYPGQAPPGAYPGQMAPGGYPGQAAPGAYPGQAPGAYPGATPGAYPGPTAPSTYPGAAPGAYPGASPYGAPSGPLAVPYDLLLPSGLVPRMLITIVGTVKPNANRLALDFKRGNDVAFHFNPRFNENNRRVIVCNTKQSNAWGREERLQTFPFEMGKQFKIQVLMEPDHFKVAVNDAHLMQYNHRVRNFTEINRLGISGDITLISATYTMI