Details from NCBI annotation

Gene Symbol Slc12a1
Gene Name solute carrier family 12 (sodium/potassium/chloride transporters), member 1, transcript variant X2
Entrez Gene ID 101719170

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC12A1 ENSCPOG00000005122 (Guinea pig)

Gene Details

solute carrier family 12 (sodium/potassium/chloride transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004608, Guinea pig)

Protein Percentage 92.17%
CDS Percentage 89.6%
Ka/Ks Ratio 0.10746 (Ka = 0.0408, Ks = 0.3801)

SLC12A1 ENSG00000074803 (Human)

Gene Details

solute carrier family 12 (sodium/potassium/chloride transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000379822, Human)

Protein Percentage 92.08%
CDS Percentage 88.23%
Ka/Ks Ratio 0.08604 (Ka = 0.0398, Ks = 0.463)

Slc12a1 ENSMUSG00000027202 (Mouse)

Gene Details

solute carrier family 12, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028630, Mouse)

Protein Percentage 91.74%
CDS Percentage 85.6%
Ka/Ks Ratio 0.06609 (Ka = 0.0451, Ks = 0.6824)

SLC12A1 ENSRNOG00000005367 (Rat)

Gene Details

solute carrier family 12 (sodium/potassium/chloride transporter), member 1 (Slc12a1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008857, Rat)

Protein Percentage 91.23%
CDS Percentage 84.51%
Ka/Ks Ratio 0.06092 (Ka = 0.0474, Ks = 0.7778)

Genome Location

Sequence Coding sequence

Length: 3300 bp    Location: 11486244..11403936   Strand: -
>XM_004835447.1
ATGTCCTTGAACAACTCTTCCAATGTATTTCTGGATTCGGTGCCCAGTAATACCAGTCGCTTTCAAGTTAATATCATAAACGAGGGCCAGGAGAGTTGTGCAGCTGTGAATGATAACAGCGACCCTCCTCATTATGAAGAGACCTCTTTTGGAGACGAAACTCAGAACAGACTGAGAATCAGTTTTAGACCTGGGAATCAGGAACGCTATGACAACTTCCTGCAAAATGGAGAAACTGCTAAAACAGACACCAGTTTTCACACCTACGATTCCCACACAAACACATACTACCTACAAACCTTTGGGCACAATACCATGGATGCGGTTCCCAAGATTGAGTACTACCGGAACACGGGCAGCGTCAGTGGACCCAAGGTCAACAGACCCAGCCTGCTGGATATTCATGAGCAACTGGCCAAGAATGTGACCATGGCCCCAGGTTCAGCAGACAGGGTTGCTAACGGCGACGGGATGCCGGGAGAGGAGCCAGGTGACAGCAAAGAGGAAGAGACAGCTGGTGTGGTGAAGTTCGGCTGGGTGAAAGGTGTGCTGGTCAGATGCATGCTGAATATCTGGGGAGTCATGCTCTTCATTCGCCTTTCCTGGATCGTGGGAGAGGCAGGAATTGGTCTTGGCATCATCATCATTGGCCTGAGCGTAGTCGTGACGACACTCACAGGTATTTCCATGTCTGCTATTTGCACAAATGGAGTGGTAAGAGGAGGTGGAGCCTACTATCTTATTTCCAGGAGCTTAGGGCCCGAGTTTGGTGGGTCAATAGGCTTGATCTTTGCATTTGCCAATGCAGTAGCGGTTGCTATGTATGTGGTAGGATTTGCTGAAACTGTAGTAGACCTTCTTAAGGAGAGCGATTCCATAATGGTGGACCCGGCCAATGACATCCGGATCATAGGCTCCATCACTGTGGTGATTCTTTTAGGAATTTCTGTCGCGGGAATGGAATGGGAAGCAAAGGCTCAAGTGATTCTTCTGATCATTCTCCTGATTGGCATAGCAAACTTCTTCATTGGGACCATCATTCCATCCAATAGTGAGAAGAGGTCTAGAGGCTTCTTTAATTACCAAGCATCAATATTTGCAGAGAACTTTGGACCAAGCTTCACAAAGGGGGAAGGCTTCTTCTCTGTCTTCGCCATTTTCTTCCCAGCAGCTACTGGAATCCTCGCTGGTGCCAATATCTCGGGAGATTTGGAGGACCCCCAAGACGCCATCCCCAGAGGGACTATGTTGGCCATTTTCATCACCACTGTGGCCTACATAGGGGTTGCTGTCTGCGTGGCTTCCTGTGTGGTCAGGGATGCCACTGGAAGCATGAATGACACCATCATTTCCAGCATGAACTGCAACGGGTCTGCAGCCTGTGGGCTGGGCTATGACTTCTCAAGATGTCGACAAGAGCCCTGTCAGTATGGGCTGATGAACAACTTCCAGGTCATGAGCATGGTGTCAGGGTTTGCCCCACTCATCACCGCTGGAATCTTTTCTGCAACGCTGTCCTCCGCCCTGGCCTCCCTGGTCAGTGCCCCCAAGGTGTTCCAGGCTCTGTGCAAAGACAACATCTTCAAAGGCCTGCAGTTCTTCGCAAAGGGATACGGGAAAAACAATGAGCCCCTGAGAGGATATTTTCTCACCTTTGTGATAGCCATGGCGTTTATTCTGATTGCGGAGCTGAACATCATTGCCCCCATCATCTCGAATTTTTTCTTGGCTTCGTATGCACTTATTAATTTCTCCTGCTTCCATGCCTCTTATGCCAAATCTCCAGGATGGAGGCCTGCCTATGGGATTTACAACATGTGGGTGTCTCTTTTTGGAGCTATTTTGTGCTGTGGCGTCATGTTTGTCATCAACTGGTGGGCAGCTGTCATCACCTATATCATTGAGTTATTCCTCTATATCTACGTGACTTATAAGAAACCAGACGTGAACTGGGGCTCGTCCACACAGGCGCTTTCCTATGTGAGTGCTTTAGACAACGCTCTGGAGTTAACCACAGTGGAAGATCACGTGAAAAACTTCAGGCCTCAATGCATTGTCCTCACAGGGGGCCCCATGACGAGACCCGCCCTCTTGGACATAACTTACGCCTTCACCAAGAACAGCGGCCTCTGTATCTGCTGTGAAGTCTTTGTGGGCCCACGCAAGCTGTGTGTTAAGGAGATGAACGGCGGCATGGCTAAAAAGCAGGCCTGGCTTATAGAGAGCAAAGTCAGGGCATTTTACGCCGCGGTGGCAGCAGACTGTTTCAGAGATGGTGTCCGCAGTCTCCTTCAGGCCTCAGGCTTGGGAAGAATGAAGCCAAACACTCTGGTGATTGGATATAAAAAAAACTGGAGGAAAGCTCCTTTGACAGAGACTGAGAACTACGTGGGAATCATCCATGATGCCTTTGACTTCGAGTTTGGTGTGGTCATAGTCAGAATCAGCCAAGGCTTTGACATCTCACAAGTCCTTCAGGTGCAAGATGAACTTGAGAAGCTGGAACAGGAGAGGCTGGCGCTGGAAGCCACGATCAAGAACAACGAGCATGAGGAAGGAAGCGAGGGCATCCGGGGCTTGTTCAAAAAAGCTGGCAAGTTGAACATCACTAAGCCACCTGCTAAGAAAGGGAGCAGCATTAACACCATCCAGTCGATGCATGTGGGGGAGTTCAACCAGAAACTGGTGGAAGCCAGCACTCAGTTCAAAAAGAAACAAGGAAAAGGAACAATTGATGTCTGGTGGCTGTTTGATGATGGAGGGCTAACAATCCTCATCCCCTATATCTTGACTCTTAGAAAAAAGTGGAAAGACTGTAAATTACGAATCTATGTGGGAGGGAAGATCAACCGAATTGAAGAAGAAAAACTCGCAATGGCTTCTCTTCTGAGCAAATTTAGGATAAAGTTTGCGGACATCCACATCATCGGTGACATCAACATCAAGCCCAACAAAGAGAGCTGGAAAGCCTTTGAAGAGATGATTGAACCCTATCGTCTTCATGAAAGCTGCAACGATTTAACAACTGCTGAGAAATTAAAAAGAGAAACTCCGTGGAAAATTACAGATGCAGAGCTGGAAGTGGTCAAAGAAAAGAGTCACCGCCAGGTTCGACTGAACGAGCTCCTCCAGGAGCACTCGAGAGCGGCCAACCTCATCGTCCTGAGCCTTCCCGTGGCGAGAAAAGGATCCATATCGGATTTGCTGTATATGGCTTGGCTAGAAATACTCACCAAGAACCTCCCTCCTGTCTTACTGGTTAGAGGAAATCACAAAAATGTTCTGACATTTTATTCTTAA

Related Sequences

XP_004835504.1 Protein

Slc12a1 PREDICTED: solute carrier family 12 member 1 isoform X2 [Heterocephalus glaber]

Length: 1099 aa      View alignments
>XP_004835504.1
MSLNNSSNVFLDSVPSNTSRFQVNIINEGQESCAAVNDNSDPPHYEETSFGDETQNRLRISFRPGNQERYDNFLQNGETAKTDTSFHTYDSHTNTYYLQTFGHNTMDAVPKIEYYRNTGSVSGPKVNRPSLLDIHEQLAKNVTMAPGSADRVANGDGMPGEEPGDSKEEETAGVVKFGWVKGVLVRCMLNIWGVMLFIRLSWIVGEAGIGLGIIIIGLSVVVTTLTGISMSAICTNGVVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVVDLLKESDSIMVDPANDIRIIGSITVVILLGISVAGMEWEAKAQVILLIILLIGIANFFIGTIIPSNSEKRSRGFFNYQASIFAENFGPSFTKGEGFFSVFAIFFPAATGILAGANISGDLEDPQDAIPRGTMLAIFITTVAYIGVAVCVASCVVRDATGSMNDTIISSMNCNGSAACGLGYDFSRCRQEPCQYGLMNNFQVMSMVSGFAPLITAGIFSATLSSALASLVSAPKVFQALCKDNIFKGLQFFAKGYGKNNEPLRGYFLTFVIAMAFILIAELNIIAPIISNFFLASYALINFSCFHASYAKSPGWRPAYGIYNMWVSLFGAILCCGVMFVINWWAAVITYIIELFLYIYVTYKKPDVNWGSSTQALSYVSALDNALELTTVEDHVKNFRPQCIVLTGGPMTRPALLDITYAFTKNSGLCICCEVFVGPRKLCVKEMNGGMAKKQAWLIESKVRAFYAAVAADCFRDGVRSLLQASGLGRMKPNTLVIGYKKNWRKAPLTETENYVGIIHDAFDFEFGVVIVRISQGFDISQVLQVQDELEKLEQERLALEATIKNNEHEEGSEGIRGLFKKAGKLNITKPPAKKGSSINTIQSMHVGEFNQKLVEASTQFKKKQGKGTIDVWWLFDDGGLTILIPYILTLRKKWKDCKLRIYVGGKINRIEEEKLAMASLLSKFRIKFADIHIIGDINIKPNKESWKAFEEMIEPYRLHESCNDLTTAEKLKRETPWKITDAELEVVKEKSHRQVRLNELLQEHSRAANLIVLSLPVARKGSISDLLYMAWLEILTKNLPPVLLVRGNHKNVLTFYS