Details from NCBI annotation

Gene Symbol Gabpb1
Gene Name GA binding protein transcription factor, beta subunit 1, transcript variant X3
Entrez Gene ID 101711074

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GABPB1 ENSCPOG00000007407 (Guinea pig)

Gene Details

GA binding protein transcription factor, beta subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006681, Guinea pig)

Protein Percentage 98.15%
CDS Percentage 94.55%
Ka/Ks Ratio 0.08127 (Ka = 0.0143, Ks = 0.1756)

GABPB1 ENSG00000104064 (Human)

Gene Details

GA binding protein transcription factor, beta subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000220429, Human)

Protein Percentage 100.0%
CDS Percentage 92.41%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3425)

Gabpb1 ENSMUSG00000027361 (Mouse)

Gene Details

GA repeat binding protein, beta 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099517, Mouse)

Protein Percentage 98.17%
CDS Percentage 90.58%
Ka/Ks Ratio 0.02099 (Ka = 0.0088, Ks = 0.4205)

Genome Location

Sequence Coding sequence

Length: 1176 bp    Location: 9782453..9822159   Strand: +
>XM_004835424.1
ATGCACACTACACATGATACACAGAAGATGTCCCTGGTAGATTTGGGGAAGAAGCTTTTAGAAGCGGCGCGTGCAGGTCAAGACGATGAAGTCCGTATTTTGATGGCAAATGGAGCTCCTTTTACTACAGACTGGCTGGGAACATCTCCACTGCACCTGGCAGCGCAGTATGGCCACTACTCCACCACAGAGGTGCTGCTCCGAGCCGGCGTGAGCAGGGATGCCAGAACCAAAGTGGACCGGACGCCCTTGCACATGGCGGCCTCCGAGGGCCACGCCAGCATCGTAGAGGTCTTGCTTAAGCATGGTGCTGACGTCAATGCAAAGGATATGTTAAAGATGACAGCTCTACATTGGGCCACAGAACACAATCATCAAGAAGTGGTGGAACTTTTAATCAAATATGGTGCTGATGTACACACGCAAAGTAAATTTTGTAAAACTGCATTTGATATTTCAATAGACAATGGAAATGAAGATTTAGCAGAGATATTACAGATTGCTATGCAGAACCAAATCAACACCAACCCAGAGAGCCCCGACACTGTGACGATACACGCCGCGACACCACAGTTCATCATCGGACCTGGAGGGGTGGTGAACCTAACAGATGAAACGGGTGTGTCTGCTGTCCAGTTTGGAAACTCCTCTACGTCAGTATTAGCTACATTAGCTGCCTTAGCTGAAGCTTCTGCTCCATTGTCCAATTCTTCAGAAACTCCAGTGGCCACGGAGGAGGTGGTTACAGCAGAGTCCGTGGATGGTGCAATTCAGCAAGTAGTCAGCTCAGGGGGTCAGCAGGTCATCACCATAGTTACAGATGGGATCCAGCTCGGAAACTTGCACTCTATTCCGACCAGCGGGATAGGTCAGCCCATCATTGTGACCATGCCAGACGGACAGCAAGTGTTAACAGTTCCTGCGACAGACATTGCTGAAGAAACTGTTATAAGTGAAGAGCCGCCAGCTAAGAGACAATGTATTGAAATAATTGAAAACCGGGTGGAATCTGCAGAAATAGAAGAGAGAGAAGCTCTTCAGAAACAGCTGGATGAAGCGAATCGAGAAGCACAGAAATACCGGCAGCAGCTTCTTAAGAAAGAACAGGAAGCAGAGGCCTACAGACAGAAGCTGGAAGCTATGACTCGTCTTCAGACTAACAAAGAAGCTGTCTGA

Related Sequences

XP_004835481.1 Protein

Gabpb1 PREDICTED: GA-binding protein subunit beta-1 isoform X3 [Heterocephalus glaber]

Length: 391 aa     
>XP_004835481.1
MHTTHDTQKMSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAATPQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVTMPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANREAQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV