Details from NCBI annotation

Gene Symbol Pygo1
Gene Name pygopus homolog 1 (Drosophila), transcript variant X2
Entrez Gene ID 101714662

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PYGO1 ENSCPOG00000002994 (Guinea pig)

Gene Details

pygopus homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018702, Guinea pig)

Protein Percentage 85.32%
CDS Percentage 86.9%
Ka/Ks Ratio 0.20511 (Ka = 0.0776, Ks = 0.3784)

PYGO1 ENSG00000171016 (Human)

Gene Details

pygopus homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000302327, Human)

Protein Percentage 82.78%
CDS Percentage 81.26%
Ka/Ks Ratio 0.13214 (Ka = 0.1026, Ks = 0.7768)

Pygo1 ENSMUSG00000034910 (Mouse)

Gene Details

pygopus 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044368, Mouse)

Protein Percentage 80.05%
CDS Percentage 79.57%
Ka/Ks Ratio 0.14406 (Ka = 0.1154, Ks = 0.8014)

Pygo1 ENSRNOG00000023540 (Rat)

Gene Details

pygopus 1 (Pygo1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030327, Rat)

Protein Percentage 79.57%
CDS Percentage 79.49%
Ka/Ks Ratio 0.14645 (Ka = 0.1166, Ks = 0.7962)

Genome Location

Sequence Coding sequence

Length: 1257 bp    Location: 6148771..6173194   Strand: +
>XM_004835349.1
ATGTCCGCGGAACAGGAGAAGGAGCCCACCGCGCTGAAGAGAGCCCGAGGTGGTGATAGTGGACTGGATGGGTTAGGAGGACCAGGTGTACAACTAGGAAGCCCCGATAAGAAAAAACGAAAGGCAAATACACAGGGACCAGCTTTTCTTCCGTTGTCTGAGTATGCACCACCACCGAATCCAAACTCTGACCATCTAGTGGCTGCTAATCCATTTGATGACAACTATAATACTATTTCCTACAAACCACTGGCTGCATCAAATCTGTATCTGAGCCCTGGTTACCCTGGCTTTGGAGGATACAGCACATTCAGAATGGCACCTCACATCCCCCCGAGAATGTCCTCGCCTTACTGCGGCCCCTACTCCCTCAGGAATCAGCCACACCCATTTCCTCAGAATCCACTGGGCATGGGTTTTAGTCGACCTCATGCTTTTAACTTTGGGCCACATGATAATTCCAGTTTTGGAAATTCATCTTATAATAATGTACTAAATCATAATGTTAATATGCCTAATCAACATTTTAGGCAAAATCCTACTGAAAATTTTGTTCAGATTCTTCCACAGAATGCTAGCCAAGTATCTAATTCTGATTTTGTATCTAATTTTGTTCCTGGAAATAATTCAAATTTTGCTTCTCCATTAGAATCTAATTCTTTTATTCCACCCCCAAACACTTTTGGTCAAGGAAAAGGCCCCCCTCCAAAACAAGACTTTAGTCAAGGAACAACCAAAAACACTAATCAGAATTCTACCGCTCATGCCCCTCACTTAAATATGGATGACACAGTGAACCAGAGTAATCCTGAACTAAAAAATGCCAATCGAAACAGTGCAGCAAGTCAGGAGAACAGCAGGTCAAGCAGCGCGGAAGCTGCACACGGCAGCCACGCCAATGGGACGCAGAATAAGCCGCGACAGCCCAGGGCCGCGGTCGACGTGGGCCCCGCCGAGAAGGGCAGTCGGCCCTCGCTGCCCCCGGGCCGCCACGGCCACTCGGCGTCCGACCCTGTGTACCCCTGTGGGATCTGTACGAGCGAAGTGAACGACGACCAGGACGCCATCTTGTGCGAGGCCTCCTGTCAGAAATGGTTCCACCGCGTGTGCACGGGAATGACGGAGACGGCGTACGGGCTGCTGACGGCGGAGGCGGCCGCTGTGTGGGGCTGTGACGCCTGCATGGCAGCCTCGGACGTGCAGCTGATGCGCACCCGGGAGGCCCTAGGGCCCGCGGCGCAGGGGAGCGATGCCTGA

Related Sequences

XP_004835406.1 Protein

Pygo1 PREDICTED: pygopus homolog 1 isoform X2 [Heterocephalus glaber]

Length: 418 aa      View alignments
>XP_004835406.1
MSAEQEKEPTALKRARGGDSGLDGLGGPGVQLGSPDKKKRKANTQGPAFLPLSEYAPPPNPNSDHLVAANPFDDNYNTISYKPLAASNLYLSPGYPGFGGYSTFRMAPHIPPRMSSPYCGPYSLRNQPHPFPQNPLGMGFSRPHAFNFGPHDNSSFGNSSYNNVLNHNVNMPNQHFRQNPTENFVQILPQNASQVSNSDFVSNFVPGNNSNFASPLESNSFIPPPNTFGQGKGPPPKQDFSQGTTKNTNQNSTAHAPHLNMDDTVNQSNPELKNANRNSAASQENSRSSSAEAAHGSHANGTQNKPRQPRAAVDVGPAEKGSRPSLPPGRHGHSASDPVYPCGICTSEVNDDQDAILCEASCQKWFHRVCTGMTETAYGLLTAEAAAVWGCDACMAASDVQLMRTREALGPAAQGSDA