Sequence details NCBI ID: XM_004835337.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sec13
Gene Name SEC13 homolog (S. cerevisiae)
Entrez Gene ID 101709886

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEC13 ENSCPOG00000015707 (Guinea pig)

Gene Details

SEC13 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014162, Guinea pig)

Protein Percentage 97.51%
CDS Percentage 94.39%
Ka/Ks Ratio 0.0452 (Ka = 0.0113, Ks = 0.25)

SEC13 ENSG00000157020 (Human)

Gene Details

SEC13 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000312122, Human)

Protein Percentage 94.72%
CDS Percentage 89.96%
Ka/Ks Ratio 0.04677 (Ka = 0.025, Ks = 0.5335)

Sec13 ENSMUSG00000030298 (Mouse)

Gene Details

SEC13 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032440, Mouse)

Protein Percentage 95.65%
CDS Percentage 88.61%
Ka/Ks Ratio 0.03497 (Ka = 0.0229, Ks = 0.6558)

Genome Location

Sequence Coding sequence

Length: 969 bp    Location: 5194961..5217821   Strand: +
Raw sequence   
>XM_004835337.1
ATGGTGTCTGTAATTAACACTGTGGACACCTCCCATGAGGACATGATTCACGATGCCCAGATGGATTATTATGGCACCCGCCTGGCCACCTGCTCTTCAGACAGGTCCGTCAAAATCTTCGATGTACGAAATGGAGGGCAGATCCTCATTGCTGACCTGAGGGGTCATGAGGGTCCTGTGTGGCAGGTGGCCTGGGCCCACCCCATGTATGGCAATATCCTGGCATCCTGCTCCTATGACCGGAAAGTCATCATCTGGAAAGAGGAGAATGGCACCTGGGAGAAGACCCATGAGCACTCGGGACATGACTCCTCAGTGAACTCTGTGTGCTGGGCCCCCCATGACTACGGTCTGATCCTGGCCTGCGGGAGCTCGGATGGGGCCATCTCCCTGCTGACCTACACAGGTGAAGGCCAGTGGGACGTGAAGAAGATCAACAATGCTCACACTATCGGCTGCAACGCTGTCAGCTGGGCCCCTGCTGTTGTACCCGGAAGCCTCATAGACCAGCCATCAGGACAGAAACCCAGCTACATCAAGAAGTTTGCTTCTGGTGGCTGTGACAACCTCATCAAGCTATGGAAGGAGGATGAAGATGGCCAGTGGATGGAGGACCAGAAGCTGGAGGCGCACAGTGACTGGGTTCGAGACGTAGCCTGGGCTCCCTCCATTGGCCTGCCCACCAGCACCATTGCTAGCTGCTCCCAGGATGGCCGAGTGTTCATCTGGACCTGTGAAGATATTTCGGGCAACACGTGGTCACCTAAGTTGCTGCACAAATTCAACGATGTTGTGTGGCATGTGAGCTGGTCCATCACCGCCAACATCCTTGCCGTCTCAGGTGGAGACAACAAGGTGACCCTGTGGAAGGAGTCGCTGGATGGCCAGTGGGTGTGCATCAGTGACGTCAACAAGGGCCAGGGCTCCGTGTCAGTCTCTGCCACAGAGAGCCAGCAGAACGAGCAGTGA

Related Sequences

XP_004835394.1 Protein

Sec13 PREDICTED: protein SEC13 homolog [Heterocephalus glaber]

Length: 322 aa      
>XP_004835394.1
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWDVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPSYIKKFASGGCDNLIKLWKEDEDGQWMEDQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCEDISGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESLDGQWVCISDVNKGQGSVSVSATESQQNEQ