Details from NCBI annotation

Gene Symbol Rpusd3
Gene Name RNA pseudouridylate synthase domain containing 3, transcript variant X2
Entrez Gene ID 101698887

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPUSD3 ENSCPOG00000022877 (Guinea pig)

Gene Details

RNA pseudouridylate synthase domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017954, Guinea pig)

Protein Percentage 87.11%
CDS Percentage 87.41%
Ka/Ks Ratio 0.19614 (Ka = 0.0711, Ks = 0.3624)

RPUSD3 ENSG00000156990 (Human)

Gene Details

RNA pseudouridylate synthase domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000373331, Human)

Protein Percentage 73.21%
CDS Percentage 76.67%
Ka/Ks Ratio 0.26957 (Ka = 0.1822, Ks = 0.6761)

Rpusd3 ENSMUSG00000051169 (Mouse)

Gene Details

RNA pseudouridylate synthase domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108715, Mouse)

Protein Percentage 68.68%
CDS Percentage 73.9%
Ka/Ks Ratio 0.28241 (Ka = 0.2246, Ks = 0.7955)

Rpusd3 ENSRNOG00000009084 (Rat)

Gene Details

RNA pseudouridylate synthase domain containing 3 (Rpusd3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059503, Rat)

Protein Percentage 67.32%
CDS Percentage 74.58%
Ka/Ks Ratio 0.34221 (Ka = 0.2347, Ks = 0.6859)

Genome Location

Sequence Coding sequence

Length: 981 bp    Location: 4467511..4464089   Strand: -
>XM_004835299.1
ATGGGCTCGCTGGTCGTGCGGCGTGGGGTCACACGAGGCTGGTGGCTGGCGCTGGGAGCTCGGGCGCGGCCCGAAGACGCAGGCTTCGGCATAGAGGCTGCGTTCTCAGGAGGAAGCCGTGCGGGCAGGGCTACCTGGGGTCTACGGGTTCTAACCCCGGCCTTCCCTTGTGGCGCCGAGCCGTGGGTCCGCCGGCTGCAAAGCGGGCCCGTGGAGCCTCGGTCTCCGGAAAGCACAGCCCCTCCTGAAGGTGTGGGAGGCGGGCAGCGAGGCTTCCCCGACGCTGGTCCCTCGGTTTCTGGGCGTCAGCCCCAACCTGGAGGCGGCCGGAAGGAGCTCGCGCACGTGCTGCGCGCCGCCGTGGTGGAGCGGAGAGGACCTCTCGTGACGCTGAACAAGCCACAGGGTCTGCCAGTGACAGGAAAACCAGGAGAGGTGACATTGCTCTCTGTGTTGCCAGAGCTGAGCCAGTCCCTGGGGCTCAGGCAGCAGGAGCTTCAGGTTGTTCGAGCACCTGGGAAGGAGAGTTCTGGACTTGTGCTCCTCTCCAGTTGTCCTCAGACAGCAAGCCGCCTCCAGAAATTCTTCATCCACTCTCGGAGAGCCCATAGACCCACGGCCACCTATTGGGCCGTTACCAATGGGATCCCACCTGCTTCTGAGGGGCAGATCTGTGCAGCGCTGACGCTGCAGCACATCAGTGGTGTCAATGTTGTGGTCCCTGTGAAGTCCCCATCCCGAAGGGACATCCTGGAGGGTGTCAAGAGGACCCTTAGCCACTTCCGTGTGATGGCCACTGGCTCTGAGTGTGCCCTGATCCAGCTACAGCCCCTCACAGCATTCTCCAGTCAGCTGCAGGTGCACATGATGCTACAGCTCTGCCCCGTGCTTGGGGACCACACCTATTCTGCTTGTGTGGGCAGTGTCCTGGGCCAGCGCTTTCTGTTGCCCGCCGAGAGCACCAAGCCTCAAAGACAGTGA

Related Sequences

XP_004835356.1 Protein

Rpusd3 PREDICTED: RNA pseudouridylate synthase domain-containing protein 3 isoform X2 [Heterocephalus glaber]

Length: 326 aa      View alignments
>XP_004835356.1
MGSLVVRRGVTRGWWLALGARARPEDAGFGIEAAFSGGSRAGRATWGLRVLTPAFPCGAEPWVRRLQSGPVEPRSPESTAPPEGVGGGQRGFPDAGPSVSGRQPQPGGGRKELAHVLRAAVVERRGPLVTLNKPQGLPVTGKPGEVTLLSVLPELSQSLGLRQQELQVVRAPGKESSGLVLLSSCPQTASRLQKFFIHSRRAHRPTATYWAVTNGIPPASEGQICAALTLQHISGVNVVVPVKSPSRRDILEGVKRTLSHFRVMATGSECALIQLQPLTAFSSQLQVHMMLQLCPVLGDHTYSACVGSVLGQRFLLPAESTKPQRQ