Details from NCBI annotation

Gene Symbol Wdr48
Gene Name WD repeat domain 48
Entrez Gene ID 101709412

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

WDR48 ENSCPOG00000010820 (Guinea pig)

Gene Details

WD repeat domain 48

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009715, Guinea pig)

Protein Percentage 98.79%
CDS Percentage 94.55%
Ka/Ks Ratio 0.02315 (Ka = 0.0055, Ks = 0.237)

WDR48 ENSG00000114742 (Human)

Gene Details

WD repeat domain 48

External Links

Gene Match (Ensembl Protein ID: ENSP00000307491, Human)

Protein Percentage 99.11%
CDS Percentage 94.88%
Ka/Ks Ratio 0.01717 (Ka = 0.004, Ks = 0.2315)

Wdr48 ENSMUSG00000032512 (Mouse)

Gene Details

WD repeat domain 48

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042509, Mouse)

Protein Percentage 98.22%
CDS Percentage 88.81%
Ka/Ks Ratio 0.01426 (Ka = 0.0083, Ks = 0.5846)

Wdr48 ENSRNOG00000016942 (Rat)

Gene Details

WD repeat domain 48 (Wdr48), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024172, Rat)

Protein Percentage 98.37%
CDS Percentage 88.66%
Ka/Ks Ratio 0.01263 (Ka = 0.0076, Ks = 0.6027)

Genome Location

Sequence Coding sequence

Length: 2034 bp    Location: 1934754..1884660   Strand: -
>XM_004835237.1
ATGGCGGCCCATCACCGGCAGAACACGGCTGGGCGGAGGAAAGTGCAGGTGTCCTATGTTATTCGAGATGAAGTGGAGAAGTACAATCGAAATGGAGTCAATGCTCTGCAGCTGGACCCAGCACTAAATAGACTTTTCACAGCTGGGCGAGACTCCATCATAAGAATATGGAGTGTCAATCAGCACAAGCAAGACCCGTACATAGCATCTATGGAACACCATACTGATTGGGTAAATGACATTGTACTGTGTTGTAATGGGAAAACATTAATATCTGCTTCTTCTGACACGACAGTGAAAGTATGGAATGCACATAAGGGATTTTGCATGTCAACATTAAGGACACATAAGGATTATGTAAAGGCCTTAGCATATGCTAAGGATAAAGAACTGGTAGCATCAGCTGGGTTGGACAGACAAATATTCCTTTGGGATGTGAATACTCTAACAGCATTGACTGCTTCAAATAACACTGTCACAACTTCTTCTTTAAGTGGGAACAAAGATTCTATTTATAGCCTGGCCATGAATCAACTTGGAACAATCATTGTATCAGGTTCCACTGAGAAGGTTTTAAGGGTATGGGATCCAAGAACATGTGCAAAACTAATGAAGCTTAAAGGACACACAGACAATGTGAAAGCTCTGCTGTTAAACAGAGATGGCACCCAGTGCCTCTCTGGTAGTTCTGATGGGACAATTCGCCTTTGGTCCCTTGGCCAGCAGAGATGTATAGCAACATACCGAGTACATGATGAAGGGGTTTGGGCCTTGCAAGTCAATGATGCCTTCACACATGTATATTCTGGAGGAAGGGACAGGAAGATTTATTGTACAGACCTAAGAAACCCTGACATTCGAGTGCTCATTTGTGAAGAAAAAGCACCAGTTCTCAAGATGGAACTGGATAGATCAGCTGATCCTCCCCCTGCAATCTGGGTTGCAACAACCAAGTCTACAGTAAATAAATGGACATTGAAGGGAATTCATAATTTTAGAACCTCTGGAGATTATGACAATGACTGTACAAGTCCTATAACTCCCCTTTGTACACAGCCTGACCAGGTTATTAAAGGGGGTGCTAGTATTATTCAGTGTCACATTCTTAATGATAAGAGACATATATTAACCAAAGATACCAATAATAACGTGGCATACTGGGATGTATTGAAGGCATGTAAAGTTGAAGATCTGGGCAAAGTGGATTTTGAAGATGAAATTAAGAAAAGATTTAAAATGGTGTATGTGCCAAATTGGTTCTCAGTAGACTTAAAAACAGGGATGTTGACGATTACTCTGGATGAGAGTGACTGCTTTGCTGCTTGGGTTTCTGCAAAAGATGCTGGCTTCAGCAGCCCTGACGGGTCAGATCCAAAATTGAATTTAGGAGGACTTTTACTCCAGGCACTCTTAGAATATTGGCCTAGAACACACGCAAGTCCAGTGGATGAAGAAGAAAATGAAGTAAACCATGTAAATGGGGAACAGGAGAACCGATTACAGAAGGGAAATGGATATTTTCAAGTGCCTCCACACACACCTGTGATCTTTGGTGAAGCGGGAGGTCGCACACTGTTCAGGCTGCTCTGCCGAGATTCCGGGGGTGAGACTGAGTCGATGCTTCTTAATGAGACAGTGCCACAATGGGTGATTGACATCACTGTGGATAAAAATATGCCCAAATTCAACAAAATTCCTTTCTACCTCCAACCTCATGCATCTTCAGGAGCTAAAACCTTAAAAAAGGATAGACTTTCTGCTAGTGACATGCTCCAGGTCAGAAAAGTAATGGAACATGTTTATGAGAAAATTATCAACTTAGATAATGAATCTCAAACCACTAGCTCTTCTAATAATGAAAAACCAGGAGAACAGGAAAAAGAAGAGGATATTGCTGTGTTGGCAGAAGAAAAAATTGAACTTTTGTGCCAGGACCAGGTTTTGGATCCAAATATGGACCTTCGAACAGTGAAACACTTCATATGGAAGAGTGGTGGTGACCTCACCCTCCATTACCGCCAGAAGTCCACGTGA

Related Sequences

XP_004835294.1 Protein

Wdr48 PREDICTED: WD repeat-containing protein 48 [Heterocephalus glaber]

Length: 677 aa      View alignments
>XP_004835294.1
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHNFRTSGDYDNDCTSPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHASPVDEEENEVNHVNGEQENRLQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKPGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYRQKST