Details from NCBI annotation

Gene Symbol Itgb5
Gene Name integrin, beta 5, transcript variant X1
Entrez Gene ID 101702445

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ITGB5 ENSCPOG00000009608 (Guinea pig)

Gene Details

integrin, beta 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008624, Guinea pig)

Protein Percentage 92.18%
CDS Percentage 90.19%
Ka/Ks Ratio 0.1073 (Ka = 0.0423, Ks = 0.3941)

ITGB5 ENSG00000082781 (Human)

Gene Details

integrin, beta 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000296181, Human)

Protein Percentage 88.21%
CDS Percentage 86.31%
Ka/Ks Ratio 0.11451 (Ka = 0.0664, Ks = 0.5799)

Itgb5 ENSMUSG00000022817 (Mouse)

Gene Details

integrin beta 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069416, Mouse)

Protein Percentage 86.75%
CDS Percentage 84.94%
Ka/Ks Ratio 0.10763 (Ka = 0.0724, Ks = 0.6731)

Itgb5 ENSRNOG00000001795 (Rat)

Gene Details

integrin, beta 5 (Itgb5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054350, Rat)

Protein Percentage 88.34%
CDS Percentage 84.77%
Ka/Ks Ratio 0.08653 (Ka = 0.0653, Ks = 0.7542)

Genome Location

Sequence Coding sequence

Length: 2268 bp    Location: 914152..804498   Strand: -
>XM_004835218.1
ATGTGCACTAGTGGAAGTGCCTCCTCCTGTGAAGAGTGTCTGATGATCCACCCAAAATGTGCCTGGTGCTCCAAAGAGGTCTTCGGCAGCTCTCGGTCAGTCACCTCCCGGTGTGACCTGAGGGCCAACCTCATCCAGAGTGGCTGTGGCAGTGAGATCGAGAGCCCGGCCAGCAGCACACGGATCCTGCGAAGCCTGCCTCTCAGCAGCGAGGGCTCTGGTGTGGTGGGCCCTGATGTCATTCAGATGGCGCCGCAGGAGGTGGCCGTGGACCTCCGGCCTGGTGACCAGACGACGTTCCAGCTGCAGGTCCGCCAAGTGGAGGACTATCCCGTGGACCTGTACTACCTGATGGACCTTTCCCTGTCAATGAAGGATGACCTAGTAAATATCCGGAGCCTGGGCACCACGCTCGCTGAAGAAATGAGGAGGCTCACGAGCAACTTCCGATTGGGTTTTGGGTCTTTTGTTGACAAGAACATTTCTCCTTTCTCTTATACCGCACCAAGGTACCAGACCAATCCATGCACTGGTTACAAGTTATTTCCTAACTGCGTCCCCTCCTTTGGGTTCCGCCATCTGCTGCCTCTCACAGACAGAGTCGACAGCTTCAATGAGGAGGTTCGGAAACAGAGGGTGTCCCGGAACCGCGATGCCCCTGAGGGAGGCTTTGATGCAGTGCTCCAGGCAGCTGTCTGCAAGGAGAAGATCGGCTGGCGTAAGGATGCGCTGCATTTGCTGGTGCTCACCACAGACGATGTGCCCCACATCGCGCTGGATGGGAAGCTGGGGGGCCTGGTGCAGCCACATGATGGCCAGTGCCACCTGAGTGATGCCAACGAGTACACCGCGTCCGACCAGATGGACTATCCATCCCTTGCCTTGCTTGGAGAGAAGTTGGCAGAGAACAACATCAACCTGATCTTTGCTGTGACAAAGAACCACTATATGCTCTACAAGAACTTTACAGCCTTGATACCTGGAACCACGGTGGAGATTTTACATGGAGACTCCAGAAATATTATTCAACTGATTATCAATGCATACAGTAGTATCCGGTCTAAAGTGGAGCTGTCCGTCTGGGATCAGCCTGAGGATCTTAACCTCTTCTTCACTGCCACCTGCCAGGATGGCCTTTCCTACCCCAATCAGAGGAAGTGTGAGGGCCTGAAGATCGGAGACACTGCATCCTTTGAAGTGTCAGTGGAGGCCTGGAGCTGCCCCAGCAGACACACTGAGCACACGTTCACTCTGCGGCCTGTGGGCTTCCGAGACAGCCTGCGGGTGGTGGTCACCTACAATTGCACGTGCAGCTGCAGCACAAGGCTGGAGCCCAACAGCACCAGGTGCAGCAGGAATGGGACTTATGTCTGTGGCCTGTGTGAGTGTAACCCCAGCTACCTGGGCACCAGGTGTGAGTGCCAGGAGGGGGAGAACCAGAGCGTGTACCAGAACCTGTGCCGGGAGGCGGAGGGCAAGCCGCTGTGCAGCGGGCGCGGTGAGTGCAGCTGCAACCAGTGTTCCTGCTTTGAGAGTGAGTTCGGGAAGATCTACGGACCTTTCTGCGAGTGTGACAACTTCTCTTGTGCCAGAAACAAGGGCGTCCTCTGCTCAGGCCATGGAGAGTGTCACTGTGGAGAATGCAAGTGCCACGCAGGTTACATCGGGGACAACTGTAACTGCTCCACAGACATCAGTACGTGCCGGGCTAAGGACGGGCAGATCTGCAGTGACCGTGGGCACTGTACCTGTGGGCATTGCCAGTGCACAGAACCTGGGGCCTTCGGGGAGACGTGTGAGAAGTGCCCGACCTGCCCGGATGCTTGCAGCACCAAGAGAGATTGTGTGGAGTGCTTGCTGCTCCACGCCAGGAACCCTGACAACCAGACCTGCCACCACCTATGCAAGGATGAGGTGATCACATGGGTGGACTCCATCGTCAGTGATGAGCAGGAAGCTGTGCTCTGTTTCTACAAGACGGCCAAGGACTGCGTCATGATGTTCACCTACGCCGAGCTGCCCAGCGGGAAGTCCAACCTGACAGTGCTCAGGGAGCCAGAATGTGGAGCCGCCCACAACGCCATGACCATTCTGCTGACTGTGGTTGGCATCACCCTTCTGATCGGGATTGGACTCCTGGCCCTCTGGAAGCTGCTCGTCACCATCCATGACCGAAGAGAGTTTGCGAGGTTCCAGAGTGAGCGCTCCAGAGCCCGCTACGAGATGGTAAGCCCACCGGAAGGGGCAGAGGAGAGACTTCCAACCTAG

Related Sequences

XP_004835275.1 Protein

Itgb5 PREDICTED: integrin beta-5 isoform X1 [Heterocephalus glaber]

Length: 755 aa      View alignments
>XP_004835275.1
MCTSGSASSCEECLMIHPKCAWCSKEVFGSSRSVTSRCDLRANLIQSGCGSEIESPASSTRILRSLPLSSEGSGVVGPDVIQMAPQEVAVDLRPGDQTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLVNIRSLGTTLAEEMRRLTSNFRLGFGSFVDKNISPFSYTAPRYQTNPCTGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVLTTDDVPHIALDGKLGGLVQPHDGQCHLSDANEYTASDQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILHGDSRNIIQLIINAYSSIRSKVELSVWDQPEDLNLFFTATCQDGLSYPNQRKCEGLKIGDTASFEVSVEAWSCPSRHTEHTFTLRPVGFRDSLRVVVTYNCTCSCSTRLEPNSTRCSRNGTYVCGLCECNPSYLGTRCECQEGENQSVYQNLCREAEGKPLCSGRGECSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCRAKDGQICSDRGHCTCGHCQCTEPGAFGETCEKCPTCPDACSTKRDCVECLLLHARNPDNQTCHHLCKDEVITWVDSIVSDEQEAVLCFYKTAKDCVMMFTYAELPSGKSNLTVLREPECGAAHNAMTILLTVVGITLLIGIGLLALWKLLVTIHDRREFARFQSERSRARYEMVSPPEGAEERLPT