Details from NCBI annotation

Gene Symbol Chat
Gene Name choline O-acetyltransferase
Entrez Gene ID 101711939

Database interlinks

Part of NW_004624928.1 (Scaffold)

For more information consult the page for NW_004624928.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHAT ENSCPOG00000005343 (Guinea pig)

Gene Details

choline O-acetyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004805, Guinea pig)

Protein Percentage 91.42%
CDS Percentage 88.61%
Ka/Ks Ratio 0.06269 (Ka = 0.0425, Ks = 0.678)

CHAT ENSG00000070748 (Human)

Gene Details

choline O-acetyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSP00000337103, Human)

Protein Percentage 88.28%
CDS Percentage 85.94%
Ka/Ks Ratio 0.085 (Ka = 0.0599, Ks = 0.7046)

Chat ENSMUSG00000021919 (Mouse)

Gene Details

choline acetyltransferase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070865, Mouse)

Protein Percentage 85.18%
CDS Percentage 82.68%
Ka/Ks Ratio 0.08773 (Ka = 0.0782, Ks = 0.8908)

Chat ENSRNOG00000025012 (Rat)

Gene Details

choline O-acetyltransferase (Chat), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036251, Rat)

Protein Percentage 87.18%
CDS Percentage 84.35%
Ka/Ks Ratio 0.08083 (Ka = 0.0654, Ks = 0.8093)

Genome Location

Sequence Coding sequence

Length: 1926 bp    Location: 406527..360188   Strand: -
>XM_004874527.1
ATGCCCATTTTGGAAAAAGACCCCCACAAAGTAGCTGCAAAAACTCCCAGCAGTGAGGAGCAGCCTGGGCTGCCCAAGCTGCCAGTGCCCCCCCTGCAGCAAACGCTGGCCACCTACCTGCGGTCCATGCGGCACCTGGTGCCTGATGAGCAGTTCCAGAGGAGCCAGGCCATTGTGCGGCAGTTTGGGGCCCCTGGTGGCCTCGGTGAGACCCTACAGCAGAAACTCTTGGAGCGGCAGGAGAAGACAGCCAACTGGGTGTCCGAGTACTGGCTGAATGACATGTACCTCAACAACCGCCTGGCCCTGCCGGTCAACTCCAGCCCAGCAGTGATCTTTGCTTGGCAGCCCTTCCAGGACACCAGCGACCAGCTCAGGTTTGCAGCTAGCCTCATCTCGGGCGTGCTGAGCTACAAGGCCCTGCTGGACAGCCACTCCATCCCCACAGACTGTGGCACAGGCCAGCTGTCGGGCCAGCCCCTCTGTACAAAGCAATACTATGGGCTCTTCTCCTCCTACCGGCTCCCTGGCCATACCCAGGACACACTGGTGGCCCAGAAGAGCAGCGTCATGCCCGAGCCTGAGCATGTCATTGTGGCCTGCTGCAACCAGTTCTTTGTCTTGGATGTGGTCATCAACTTCCACCGCCTCAGTGAGGGAGATCTGTTCACCCAGTTGAGAAAGATCGTCAAGATGGCTTCCAATGAGGATGAGCACTTGCCTCCCATCGGCCTGCTCACATCAGATGGGAGGAGCGAGTGGGCAGAGGCTAGGACGGCCCTCGTGAAAGACTCCACCAACCGCGACTCACTGGACATGATCGAGCGCTGCATCTGCCTGGTGTGCTTGGATGCCCCCAGTGGTGGGGACCTCAGTGACACGCACAGGGCGCTCCAGCTCCTCCACGGAGGGGGCTGCAGCCAGAACGGGGCCAACCGCTGGTACGACAAGTCCCTGCAGTTCGTGGTGGGCCGAGATGGCACGTGTGGCGTGGTGTGCGAACACTCCCCGTTCGACGGCATCGTCCTTGTGCAGTGCACAGAGCACCTGCTCAAGCATATGACAAAGAGCAGCAAGAAGGTGGTCCTCTCAGATTCTGTCAGTGAGCTCCCTGCACCCAGGAGGCTGAGGTGGAAATGCTCCCCAGAAATCCAGGGCCACCTGGCCTCCTCGGCAGAAAAGCTCCAAAGAATAGTGAAGAACCTGGACTTCACCGTGTACAGGTTTGCTGGCTATGGGAAGACGTTCATCAAGAAGCAGAAGTGCAGCCCCGATGCCTTCATCCAGGTGGCCCTGCAGCTGGCATTCTACAGGCACCACCGGAGACTGGTGCCCACCTATGAGAGTGCATCCATCCGGCGGTTCCAGGAGGGGCGAGTGGACAACATCCGATCAGCCACTCCAGAGGCACTGGCCTTTGTGAGAGCCATGACTGACCATGAGGCTGCCATGCCCGCTTCTGAGAAGGGACAGCTCCTGAGGGACGCAATCCGTGCCCAGACTGAGTACACAGTAATGGCCATAACAGGGATGGCCATCGACAACCACCTGCTGGGGCTGCGGGAGCTGGCCCGGGACCTGTGCATGGAGCCACCTGAGATGTTCACAGATGAGACGTACCTGACCAGCAACCGATTTGTCCTCTCCACCAGCCAGGTGCCCACTACCATGGAGATGTTCTGCTGCTATGGTCCTGTGGTCCCCAATGGCTATGGAGCCTGCTACAACCCGAAGCCCGAGACCATACTCTTCTGCATCTCCAGCTTCCACAGCTGCAAGGAAACCTCGTCGGAGGGATTTGCGGAAGCCGTGGGGGCAAGCCTCGCTGACCTGAGAGCCCTGTGTAGCCCACTGCAGCCTGCTGACTCTAGGCCTCTGGCGACAGAAGAGAAAGCCAGGGGGCCCAGCCAGGACCACCAGCCTTGA

Related Sequences

XP_004874584.1 Protein

Chat PREDICTED: choline O-acetyltransferase [Heterocephalus glaber]

Length: 641 aa      View alignments
>XP_004874584.1
MPILEKDPHKVAAKTPSSEEQPGLPKLPVPPLQQTLATYLRSMRHLVPDEQFQRSQAIVRQFGAPGGLGETLQQKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFAWQPFQDTSDQLRFAASLISGVLSYKALLDSHSIPTDCGTGQLSGQPLCTKQYYGLFSSYRLPGHTQDTLVAQKSSVMPEPEHVIVACCNQFFVLDVVINFHRLSEGDLFTQLRKIVKMASNEDEHLPPIGLLTSDGRSEWAEARTALVKDSTNRDSLDMIERCICLVCLDAPSGGDLSDTHRALQLLHGGGCSQNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMTKSSKKVVLSDSVSELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFTVYRFAGYGKTFIKKQKCSPDAFIQVALQLAFYRHHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAMTDHEAAMPASEKGQLLRDAIRAQTEYTVMAITGMAIDNHLLGLRELARDLCMEPPEMFTDETYLTSNRFVLSTSQVPTTMEMFCCYGPVVPNGYGACYNPKPETILFCISSFHSCKETSSEGFAEAVGASLADLRALCSPLQPADSRPLATEEKARGPSQDHQP