Details from NCBI annotation

Gene Symbol Pdgfd
Gene Name platelet derived growth factor D, transcript variant X1
Entrez Gene ID 101696768

Database interlinks

Part of NW_004624918.1 (Scaffold)

For more information consult the page for NW_004624918.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDGFD ENSCPOG00000005593 (Guinea pig)

Gene Details

platelet derived growth factor D

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005039, Guinea pig)

Protein Percentage 91.89%
CDS Percentage 91.35%
Ka/Ks Ratio 0.15789 (Ka = 0.0409, Ks = 0.2593)

PDGFD ENSG00000170962 (Human)

Gene Details

platelet derived growth factor D

External Links

Gene Match (Ensembl Protein ID: ENSP00000376865, Human)

Protein Percentage 87.57%
CDS Percentage 88.47%
Ka/Ks Ratio 0.20166 (Ka = 0.0657, Ks = 0.3258)

Pdgfd ENSMUSG00000032006 (Mouse)

Gene Details

platelet-derived growth factor, D polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128388, Mouse)

Protein Percentage 84.86%
CDS Percentage 84.68%
Ka/Ks Ratio 0.1306 (Ka = 0.0748, Ks = 0.5724)

Pdgfd ENSRNOG00000029148 (Rat)

Gene Details

platelet derived growth factor D (Pdgfd), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039308, Rat)

Protein Percentage 85.41%
CDS Percentage 84.59%
Ka/Ks Ratio 0.13458 (Ka = 0.0758, Ks = 0.5629)

Genome Location

Sequence Coding sequence

Length: 1113 bp    Location: 1052708..1290657   Strand: +
>XM_004874018.1
ATGCACCGGTTCATCTTCGTCTACACTCTAATCTACTCAAACTTCTGCATCTGTCGGGACACTTCTGCGACTCCGCAGAGCGCATCCATCAGAGCTTTGCGCAATGCCAATCTCAGGCGAGATGAGAGCAATCACCTCACAGACTTGTACCGGAAAGATGAAACCATCCAGGTGACAGGAAACGGACACCTGCAGAGTCCCCGCTTCCCAAACAACTACCCTAGGAATCTGCTTCTGACATGGCGGCTCCATTCCCAGGAAAAAACAAGGATACAGCTCGCATTTGACCATCAGTTTGGATTAGAAGAAGCAGAGAATGATATCTGTAGGTATGATTTTGTGGAAGTTGAAGATATATCTGAAATAAGTACCATTATTAGAGGAAGATGGTGTGGACACAAGGAAGTTCCTCCAAGGATAACTTCAAGAACAAACCAAATTAAAATAACATTCAAGTCTGATGACTACTTTGTGGCTAAACCTGGTTTCAAGATACATTATTCTTTGCTGGAAGATTTCCAACCTGCAGCAGCCTCTAAAACCAACTGGGAGTCAGTCACAAGTTCTACCTCAGGGGTATCCTATCACTATCCATCAGTAACTGATCCCGCTCTCGCTGCCGATGCTCTGGACAAAACAGTTGCAGAATTTGATACTGTGGAGGATCTGCTCAAGCACTTCAATCCAGAATCATGGCAAGAAGATCTTGAGAATCTGTATTTGGACACCCCCTATTATCGAGGCAGGTCGTACCATGATCGAAAGTCAAAAGTTGACCTGGACAGGCTCAATGAGGATGTCAAGCGTTACAGTTGCACCCCCAGGAATTACTCAGTCAACCTGAGAGAGGAGCTGAAGCTGACCAATGCGGTCTTCTTTCCCCGCTGCCTCCTGGTGCAACGCTGTGGAGGAAATTGTGGCTGTGGAATTGCCAATGGCAAGTCCTGCACATGCAGCTCAGGGAAAACTGTGAAAAAGTACCATGAGGTGTTAAAGTTTGAGCCTGGCCGTTCCAAAAAGAAGGGCAAAGCTAAGAACATGGCTCTTGTTGACATCCAGCTGGATCACCATGAACGATGCAATTGTATCTGTGGTTCAAGACCACCTCGATAA

Related Sequences

XP_004874075.1 Protein

Pdgfd PREDICTED: platelet-derived growth factor D-like isoform X1 [Heterocephalus glaber]

Length: 370 aa      View alignments
>XP_004874075.1
MHRFIFVYTLIYSNFCICRDTSATPQSASIRALRNANLRRDESNHLTDLYRKDETIQVTGNGHLQSPRFPNNYPRNLLLTWRLHSQEKTRIQLAFDHQFGLEEAENDICRYDFVEVEDISEISTIIRGRWCGHKEVPPRITSRTNQIKITFKSDDYFVAKPGFKIHYSLLEDFQPAAASKTNWESVTSSTSGVSYHYPSVTDPALAADALDKTVAEFDTVEDLLKHFNPESWQEDLENLYLDTPYYRGRSYHDRKSKVDLDRLNEDVKRYSCTPRNYSVNLREELKLTNAVFFPRCLLVQRCGGNCGCGIANGKSCTCSSGKTVKKYHEVLKFEPGRSKKKGKAKNMALVDIQLDHHERCNCICGSRPPR