Sequence details NCBI ID: XM_004873838.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Chtf18
Gene Name CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
Entrez Gene ID 101709644

Database interlinks

Part of NW_004624913.1 (Scaffold)

For more information consult the page for NW_004624913.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHTF18 ENSCPOG00000010100 (Guinea pig)

Gene Details

CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009070, Guinea pig)

Protein Percentage 87.57%
CDS Percentage 88.09%
Ka/Ks Ratio 0.23306 (Ka = 0.0742, Ks = 0.3183)

CHTF18 ENSG00000127586 (Human)

Gene Details

CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000262315, Human)

Protein Percentage 77.8%
CDS Percentage 79.89%
Ka/Ks Ratio 0.1457 (Ka = 0.133, Ks = 0.9131)

Chtf18 ENSMUSG00000019214 (Mouse)

Gene Details

CTF18, chromosome transmission fidelity factor 18

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043896, Mouse)

Protein Percentage 77.66%
CDS Percentage 78.7%
Ka/Ks Ratio 0.17347 (Ka = 0.1416, Ks = 0.816)

Chtf18 ENSRNOG00000019174 (Rat)

Gene Details

CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) (Chtf18), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026139, Rat)

Protein Percentage 79.24%
CDS Percentage 79.37%
Ka/Ks Ratio 0.15356 (Ka = 0.1287, Ks = 0.838)

Genome Location

Sequence Coding sequence

Length: 2922 bp    Location: 1594767..1603586   Strand: +
Raw sequence   
>XM_004873838.1
ATGGAGGACTACGAAGAGGAGCTGCACGGCGTGGAGGACGACTTCCACAGCCAGTTCGCGGCGGAGCTCGAGGTGCTGGCCGAGCTGGAAGGGATGCCATTCTTGCCGCCCTCGGGGGTCCCACCTCCTGTTGCAGCCGGGCCCAGGCCAACGTTTGAGGAGGCCATCGCTGGAGGGGACGCCGCCACTTGTCCCTGGCCCCCTGCCTCTCGGGGCAGCAGCAGATGCGGTGCCAGAAAGCGGCCAGAGGAGGCTACCTCCCCCAACAAGGAGCCCCTGCCCCACACTCCCAAAGTCAAGCGGCCCAAGCTGGAGGCTGTCAAGAGACTGAACTTTGGGCCAGAAATGGAAGATCTGCAGTTTCCTGAGTCCCCACCAAGGGACATAACCCCCCCACTGAGTCCTGAGGTCCCCAAGGAGCTGTGGGGTTCTGGACCTCTGGATGTTGCTGCAGATGCAGGTCTCACACAGGCCTTACATGGCACTCAGAATCCTGTCTTGAGGCGGCCCCCTGTCTTAGAGGATTACATCAACGTGACCTCCACAGGTGGTGACCGGGCCTTTCTGGTGCTTCATCCTGACTCCACAGGCACTGGAGTACAGAGCCCTCTCTTGGATGTCCGATGGCGACGCCCTGGCCGGCTAGACCTACTGGGTATCTCCTTTGCTTCCCTGAAGGACCAGGTTGACAGTGAGCGACGGCAGCGGTTGGTACAGGAGGCCCAGCAGCTCTCAGACATTCTGCATAGCCTCAGGTCTGAAGAGGAAGAAGCCCAGGGCATGAGGGACCCCATGGAGGAGCCTGCTGATGGCCAAGACACATCCCAGCACTGCCTCTGGGTGGATGAATTTGCACCCCAACGCTACACAGAACTGCTCAGTGATGATTTCACCAACCGCTGCTTGCTCAAGTGGCTGAAGCTGTGGGACCTGGTGGTGTTTGGCCACGAGAGGCCTTCCCGGAAGCCCAGGCCCAATGTAGAGCCAGCCCGGATTGGCAAGGAGGCCACGGCCTCAGGGAAGTGGAAAAGCCAGGAGCAAGTGGTGGAAGAGATGCTCGAGGCCGAGCTGGATCCAAACGGGCGGCCCCGGCAGAAGGTGGCCCTGCTCTGTGGCCCCCCCGGGCTGGGAAAGACAACATTGGCACACGTGATTGCACGACACGCTGGGTACTGTGTGGTGGAGATGAATGCCAGTGATGACCGTAGCCCCGAGGCTTTCCGCACACGCATTGAGGCAGCCACGCAGATGGAGTCAGTACTGGGTACCAGCGGGAAGCCCAACTGCTTGGTCATTGATGAGATTGATGGGGCCCCTACGGCTGCCATCAATGTCCTCCTGAGCATCCTGAACCGCAAGGGTCCACAGGAGGCAGAGCCAGGTGGTCCAGCTGTGCCCTTAGGAGGGGGCAGACGGCGCCGGACAGAGGGTACCCTCCTGACCAGGCCCATCATATGCATCTGCAATGACCAGTTTACACCTTCTCTGCGACAGCTAAAGCAGCAGGCTTTCCTGCTCCATTTCCCACCGACTCTGCCCTCAAGGCTGGTGCAGCGGCTCCAGGAGATCTCCCTGCAGCAGGGGATGCAGTCTGACCCAGGTGCACTGGCAGCCCTTTGCGAGAAGGCAGACAATGACATTCGTGCCTGCATTAACACCCTGCAGTTCCTGCATAGGCGTGGCCAGTGGGAACTGAGTGTTCGAGATGTGCAGGCCACCCATGTTGGCTTCAAGGACCAGCGTAAAGGACTTTTCTTCGTGTGGCAGGAGGTCTTCCAGCTGCCCCGGGCTCAGAGGCGACTTGGAGGCCAGGACCCCAACCTGCTAGCCCACACACTGCTGCCTGGTAACAGGGAGATGGGCTCCTTGACCCTGGCCTCCCAGAGCTTCTACCACATCCTGCGAGTCACCACCTCTGCGGGCGAGCATGAGAAAGTGGTCCAGGGCCTTTTTGACAACTTCTTGCGCCTACGGCTGCGGGACTCCAGCCTGGGATCTGTGTGCATGGCCCTCGACTGGCTGGCCTTTGATGACCTGTTGGAGCAGGCTGCTCACCACGGCCAGAGCTTCCAGCTCCTGCACTACCTGTCCTTCCTGCCTGCAGCCTTCCATGTGCTCTTTGCCTCCAGCCATGTGCCTCGGATTGCCTTCCCCAGCACCCAGCAAGAGGCCCAGAACAGGATGAGCCAGATAAGAAACCTGATCCAAACACTCGTGTCAGGCATTGCACCAGCCACCCGCAGCTGGGCCACACCCCAGGCCCTCATCCTGGACACCCTCTGCCTGGTCCTGGACATCCTTACACCTAAGCTGCGTCCCGTGAGCACACAGCTGTACAGTACCCGAGAGAAGCAGCAGCTGTCCAGCCTTGTGGGCACCATGCTTGCCTACAGCCTTACCTATCGCCAGGAGCGCACACCTGATGGACAGTACCTCTACAGGCTGGAGCCGAATGTGGAGGAGGTCTGCCACTTCCCTGAGCTGCCTGCCCGAAAGCCCCTCACCTACCAGGCCAAGCAGCTCATCGCTCGGGAGATTGAGGTGGAAAAGATGCGTCGGGCAGAGGCTTTGGCCCATGCTAGGGTTGGCCCTCAGGTGGACCAGGGTGCCCCAGGGCCTGAAGGTCTCTTTTCGGGTAGTAGAGATAAAGAGGTGAGGCAACCTGCTCTGCGCAACCATGAGCAGCGGCTGGAACATATCATGAAGAAAGCAGCCCTGGAGGAGCAGCCTGAGAGGGACTTCTTCGGACGTGTGGTTGTCAGGAGAGCAGCAGCTCCAAGTACAGAGACCGAGGCCCCAGAGAAGGATGCGGTAGAGTGGCACATGGGCACAGCAGTGGGCAGGAGCGAGGTCTGGTTCCGCTTCAACGAGGGCGTCTCCAATGCTGTGCGGCGGGGCGTGTACATCAGGGACCTATTGTAG

Related Sequences

XP_004873895.1 Protein

Chtf18 PREDICTED: chromosome transmission fidelity protein 18 homolog [Heterocephalus glaber]

Length: 973 aa      View alignments
>XP_004873895.1
MEDYEEELHGVEDDFHSQFAAELEVLAELEGMPFLPPSGVPPPVAAGPRPTFEEAIAGGDAATCPWPPASRGSSRCGARKRPEEATSPNKEPLPHTPKVKRPKLEAVKRLNFGPEMEDLQFPESPPRDITPPLSPEVPKELWGSGPLDVAADAGLTQALHGTQNPVLRRPPVLEDYINVTSTGGDRAFLVLHPDSTGTGVQSPLLDVRWRRPGRLDLLGISFASLKDQVDSERRQRLVQEAQQLSDILHSLRSEEEEAQGMRDPMEEPADGQDTSQHCLWVDEFAPQRYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKPRPNVEPARIGKEATASGKWKSQEQVVEEMLEAELDPNGRPRQKVALLCGPPGLGKTTLAHVIARHAGYCVVEMNASDDRSPEAFRTRIEAATQMESVLGTSGKPNCLVIDEIDGAPTAAINVLLSILNRKGPQEAEPGGPAVPLGGGRRRRTEGTLLTRPIICICNDQFTPSLRQLKQQAFLLHFPPTLPSRLVQRLQEISLQQGMQSDPGALAALCEKADNDIRACINTLQFLHRRGQWELSVRDVQATHVGFKDQRKGLFFVWQEVFQLPRAQRRLGGQDPNLLAHTLLPGNREMGSLTLASQSFYHILRVTTSAGEHEKVVQGLFDNFLRLRLRDSSLGSVCMALDWLAFDDLLEQAAHHGQSFQLLHYLSFLPAAFHVLFASSHVPRIAFPSTQQEAQNRMSQIRNLIQTLVSGIAPATRSWATPQALILDTLCLVLDILTPKLRPVSTQLYSTREKQQLSSLVGTMLAYSLTYRQERTPDGQYLYRLEPNVEEVCHFPELPARKPLTYQAKQLIAREIEVEKMRRAEALAHARVGPQVDQGAPGPEGLFSGSRDKEVRQPALRNHEQRLEHIMKKAALEEQPERDFFGRVVVRRAAAPSTETEAPEKDAVEWHMGTAVGRSEVWFRFNEGVSNAVRRGVYIRDLL