Details from NCBI annotation

Gene Symbol Rpusd1
Gene Name RNA pseudouridylate synthase domain containing 1
Entrez Gene ID 101708919

Database interlinks

Part of NW_004624913.1 (Scaffold)

For more information consult the page for NW_004624913.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPUSD1 ENSCPOG00000010098 (Guinea pig)

Gene Details

RNA pseudouridylate synthase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009068, Guinea pig)

Protein Percentage 96.41%
CDS Percentage 91.94%
Ka/Ks Ratio 0.06062 (Ka = 0.0188, Ks = 0.3099)

RPUSD1 ENSG00000007376 (Human)

Gene Details

RNA pseudouridylate synthase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000455026, Human)

Protein Percentage 83.99%
CDS Percentage 83.12%
Ka/Ks Ratio 0.08975 (Ka = 0.0815, Ks = 0.9084)

Rpusd1 ENSMUSG00000041199 (Mouse)

Gene Details

RNA pseudouridylate synthase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043825, Mouse)

Protein Percentage 87.91%
CDS Percentage 84.42%
Ka/Ks Ratio 0.10404 (Ka = 0.0689, Ks = 0.6622)

Rpusd1 ENSRNOG00000023639 (Rat)

Gene Details

RNA pseudouridylate synthase domain containing 1 (Rpusd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015206, Rat)

Protein Percentage 87.58%
CDS Percentage 82.35%
Ka/Ks Ratio 0.08284 (Ka = 0.0729, Ks = 0.8801)

Genome Location

Sequence Coding sequence

Length: 921 bp    Location: 1594467..1591311   Strand: -
>XM_004873836.1
ATGGAGCCAGGCAGCGTGGAGAACCTGTCCATCGTATATCAGAGCCGCGACTTCTTGGTAGTAAACAAGCACTGGGACCTGCGCATTGATTGCAAGACGTGGCGGGAGACCTTGACCCTGCAGAAGCAGCTTCGGCACCACTTCCCAGAGTTGGCTGACCCTGACACCTGCTACGGGTTCAGGTTCTGCCACCAATTGGACTTCTCCACCAGCGGGGCACTGTGCGTGGCACTGAACAAGGCAGCCGCAGGCAGTGCTTATAGATGCTTCAAGGAGCGGCGTGTCACCAAGGCTTACTTGGCATTGGTTCGGGGCCATATCCAGGAGAGCCAGCTGACAGTCAGCTATGCCATTGGCAGGAACAGCACAGAGGGCCGGACGCATACCATGTGCATCGAGGGCACACAGGGTTGCGAGAACCCAAAGCCAAGTCTCACAGAGCTTCTGGTCCTGGAACACGGGCTATATGACGGCAATCCTGTATCCAAAGTGCTGCTGAAGCCACTGACAGGCCGGACTCACCAGCTGCGTGTGCACTGCAGTGCCCTCGGTCACCCTATTGTGGGTGATTTGACGTATGGGCAGGCCACTGGCCAAGAGGACCAGCCTTTCCGCATGATGCTGCACGCATTCTACCTGCGCATCCCCACATTGGCTGAGTGTGTGGAGGCCTGCACGCCGGACCCCTTCCTGTCCACCCTCGACGCCTGCTGGTGCCCTCACACCCTGGTGCAACCTCTTGACCAGCTTCTCCAGGCCCTGCGGGCTGCCCCTGACCCTGGGCCAATGGATGGGGACCCTGGGTCCTGTAGCCCCCCTGTACCCCTACCCGGGCCAGGCCAGGGCCCTCCTGAGACTGAAGCTCAACGAACATCCTGCCTGCAGTGGCTGTTGGAGTGGACACTGGAACCAGACAACTGA

Related Sequences

XP_004873893.1 Protein

Rpusd1 PREDICTED: RNA pseudouridylate synthase domain-containing protein 1 [Heterocephalus glaber]

Length: 306 aa      View alignments
>XP_004873893.1
MEPGSVENLSIVYQSRDFLVVNKHWDLRIDCKTWRETLTLQKQLRHHFPELADPDTCYGFRFCHQLDFSTSGALCVALNKAAAGSAYRCFKERRVTKAYLALVRGHIQESQLTVSYAIGRNSTEGRTHTMCIEGTQGCENPKPSLTELLVLEHGLYDGNPVSKVLLKPLTGRTHQLRVHCSALGHPIVGDLTYGQATGQEDQPFRMMLHAFYLRIPTLAECVEACTPDPFLSTLDACWCPHTLVQPLDQLLQALRAAPDPGPMDGDPGSCSPPVPLPGPGQGPPETEAQRTSCLQWLLEWTLEPDN