Details from NCBI annotation

Gene Symbol Apoe
Gene Name apolipoprotein E, transcript variant X2
Entrez Gene ID 101717206

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624907.1 (Scaffold)

For more information consult the page for NW_004624907.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APOE ENSCPOG00000007235 (Guinea pig)

Gene Details

apolipoprotein E

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006519, Guinea pig)

Protein Percentage 81.21%
CDS Percentage 88.03%
Ka/Ks Ratio 0.22852 (Ka = 0.0958, Ks = 0.4191)

APOE ENSG00000130203 (Human)

Gene Details

apolipoprotein E

External Links

Gene Match (Ensembl Protein ID: ENSP00000252486, Human)

Protein Percentage 76.59%
CDS Percentage 83.84%
Ka/Ks Ratio 0.13833 (Ka = 0.1215, Ks = 0.8785)

Apoe ENSMUSG00000002985 (Mouse)

Gene Details

apolipoprotein E

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000133302, Mouse)

Protein Percentage 74.75%
CDS Percentage 77.67%
Ka/Ks Ratio 0.09351 (Ka = 0.1539, Ks = 1.6455)

Apoe ENSRNOG00000018454 (Rat)

Gene Details

apolipoprotein E (Apoe), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050968, Rat)

Protein Percentage 74.07%
CDS Percentage 77.67%
Ka/Ks Ratio 0.08467 (Ka = 0.153, Ks = 1.8075)

Genome Location

Sequence Coding sequence

Length: 900 bp    Location: 1752303..1755309   Strand: +
>XM_004873142.1
ATGAAGGCCCTGTGGGCTGTATTGGTGGTCACCCTTCTGGCAGGATGCCGGGCAGATGTGCAGCCGGAGCTGGAGATGCAGGAGCCAGCCTTGTGGCAGAGCGGACAGCCCTGGGAGCTGGCGCTGGGCCGCTTCTGGGATTACCTGCGCTGGGTGCAGACACTGTCTGACCAGGTGCAGGAGGAGCTGCTCAACTCCCAGGTCACCCAGGAGCTGACGGTGCTGATGGAGGACACCATGAAGGAGGTGAAGGCCTACAAGAACGAGCTGGAGGAAGAACTAGGACCGGTGGCAGAGGACACGAAGGCCCGGCTGTCCAAGGAGCTGCAGGGGGCGCAGGCGCGGCTCAGGGCAGACATGGAGGAGGTGCGCAACCGCCTGGCGCATTACAGCGAAGAGATGCAGGTCATGCTGGGCCAGAGTCCCGACGAGCTGCGCGCCCGCCTGGGCTCGCACCTGCGCAAGCTGCGCAAGCGGCTGCTGCGGGACGCTGAGGACCTGCAAAAGCGCCTGGCTGTGTACAAGGCCGGAGCCCGCGAGGGCGCCGAGCGTGGGGTGAGCGCCATCCGCGAGCGCCTGGGGTCCCTGGTGGAGCAGAGCCGCGTGCGCGCAGCCCTAACGGGCCAACCGCTGCGGGAGCGCGCCCAGGCCTGGGGCGAGCGGCTGCGCGGGCGGCTGGAGGAGGTGGGCGGCCGGGCGCGCGACCGCCTGGACGAGGTGCGCGAGCAGATGGAGGAGGTGCGCGCCAAGGTAGAGGAGCAGGCCGAGGCCTTCCAGGCGCGCCTGAAGGGCTGGTTCGAGCCCATGATGGAAGACATGCGGCGCCAGTGGGCCGATCTCATCGAGAAGGTGCAATTGGCCGTGGGCGCAAGCACCCCCGTGCCCAGCGAGGACCACTGA

Related Sequences

XP_004873199.1 Protein

Apoe PREDICTED: apolipoprotein E isoform X2 [Heterocephalus glaber]

Length: 299 aa      View alignments
>XP_004873199.1
MKALWAVLVVTLLAGCRADVQPELEMQEPALWQSGQPWELALGRFWDYLRWVQTLSDQVQEELLNSQVTQELTVLMEDTMKEVKAYKNELEEELGPVAEDTKARLSKELQGAQARLRADMEEVRNRLAHYSEEMQVMLGQSPDELRARLGSHLRKLRKRLLRDAEDLQKRLAVYKAGAREGAERGVSAIRERLGSLVEQSRVRAALTGQPLRERAQAWGERLRGRLEEVGGRARDRLDEVREQMEEVRAKVEEQAEAFQARLKGWFEPMMEDMRRQWADLIEKVQLAVGASTPVPSEDH