Details from NCBI annotation

Gene Symbol Snx12
Gene Name sorting nexin 12, transcript variant X2
Entrez Gene ID 101712753

Database interlinks

Part of NW_004624903.1 (Scaffold)

For more information consult the page for NW_004624903.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNX12 ENSCPOG00000011841 (Guinea pig)

Gene Details

sorting nexin 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010652, Guinea pig)

Protein Percentage 99.29%
CDS Percentage 95.95%
Ka/Ks Ratio 0.04519 (Ka = 0.0066, Ks = 0.1459)

SNX12 ENSG00000147164 (Human)

Gene Details

sorting nexin 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000363392, Human)

Protein Percentage 99.37%
CDS Percentage 94.09%
Ka/Ks Ratio 0.02265 (Ka = 0.0057, Ks = 0.2531)

Snx12 ENSMUSG00000046032 (Mouse)

Gene Details

sorting nexin 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000119102, Mouse)

Protein Percentage 98.1%
CDS Percentage 92.83%
Ka/Ks Ratio 0.0496 (Ka = 0.0144, Ks = 0.2896)

Snx12 ENSRNOG00000004036 (Rat)

Gene Details

sorting nexin 12 (Snx12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061412, Rat)

Protein Percentage 98.1%
CDS Percentage 92.41%
Ka/Ks Ratio 0.04823 (Ka = 0.0146, Ks = 0.303)

Genome Location

Sequence Coding sequence

Length: 477 bp    Location: 1366842..1358769   Strand: -
>XM_004872626.1
ATGTCGGACACGGCTGTAGCCGACACTCGGCGCCTTAACTCGAAGCCGCAGGACCTGACCGACGCATACGGGCCGCCAAGTAACTTCCTGGAGATCGACATCTTTAATCCACAAACAGTGGGCGTGGGCCGCGCGCGCTTCACCACCTATGAGACAAACCTACCTATCTTCAAGCTGAAAGAGTCCTGTGTACGGAGGCGCTACAGTGACTTTGAATGGCTGAAAAATGAGCTGGAGCGAGATAGTAAGATTGTAGTACCACCACTGCCTGGAAAAGCCTTGAAGCGGCAGCTCCCTTTTCGAGGAGATGAAGGGATCTTTGAAGAATCTTTCATTGAAGAAAGGAGGCAGGGCCTCGAACAGTTTATTAACAAAATTGCTGGGCACCCACTGGCTCAGAATGAACGCTGCCTACACATGTTCCTGCAGGAGGAGGCAATTGACAGGAACTACGTCCCTGGGAAGGTGCGCCAATAG

Related Sequences

XP_004872683.1 Protein

Snx12 PREDICTED: sorting nexin-12 isoform X2 [Heterocephalus glaber]

Length: 158 aa      View alignments
>XP_004872683.1
MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYETNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKVRQ