Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101716733

Database interlinks

Part of NW_004624871.1 (Scaffold)

For more information consult the page for NW_004624871.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BRIP1 ENSCPOG00000011648 (Guinea pig)

Gene Details

BRCA1 interacting protein C-terminal helicase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010475, Guinea pig)

Protein Percentage 88.14%
CDS Percentage 92.19%
Ka/Ks Ratio 0.37938 (Ka = 0.0614, Ks = 0.1619)

BRIP1 ENSG00000136492 (Human)

Gene Details

BRCA1 interacting protein C-terminal helicase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000259008, Human)

Protein Percentage 81.06%
CDS Percentage 86.76%
Ka/Ks Ratio 0.31215 (Ka = 0.1037, Ks = 0.3323)

Brip1 ENSMUSG00000034329 (Mouse)

Gene Details

BRCA1 interacting protein C-terminal helicase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043108, Mouse)

Protein Percentage 74.96%
CDS Percentage 79.86%
Ka/Ks Ratio 0.24227 (Ka = 0.1515, Ks = 0.6254)

Genome Location

Sequence Coding sequence

Length: 3771 bp    Location: 2052968..2203449   Strand: +
>XM_004870434.1
ATGTCATCATTGTGTTCTGAATACACAATTGGTGGGGTGAAGATTAACTTTCCTTGTAAAGCTTACCCATCACAGCTTGCTATGATGAATTCAATTGTCAGAGGATTGAACAGTAGGCAGCATTGTTTGTTGGAGAGCCCTACTGGAAGTGGAAAAAGCTTAGCCTTACTTTGTTCTGCTTTAGCATGGCAACAGTCTCTTAGTGGGAAGCCAGTGGATGAAGGCTTAAATAAAAAAGCTGAAGTACCATTGTCATGTTGTTGTACATGCCATTCAAGGAGCTCCACACATAGTGATGTGAACCAGGAGACTTCGCATCACTTTAGCAGTTCCGCTACACCACCATCTGAAAGGAGTGGCACTTCATCAGCTTGCCAAGACTCTCCTGCAAAAAACACACTGGCTGCAAAGTTGTCTGCCAAGAAACAGGCATCCAAACACAGAGATGAAAATGATGATTTTCAGATAGAGAAGAAAAGAATTCGACCCTTAGAAACTGCGCAGCAGATTAGAAAGCGTCATTGTTTTGAAAAGGAAGTACCCCATTTGGATGCGCAAGATGCCTTGGAGGACACTCTGAAATTCAATTCCCCATTAGGAAAAATAAACTCCTTTTCTTCACAAAATCCCCCTGGCCACTGTTCTAGGTGCTCCTGTTCTACTAAACAAGGAAACAGTCAAGAATCTTCACATACCATTAAGAAGGATCATGGGGGGAAATTCAAGAGGCCCAAAATATATTTTGGGACACGCACACACAAGCAGATTGCTCAGATTACTAGAGAGCTCCGGAAGACAGCATATTCAGGGGTCCCAATGACTATTCTTTCTAGCAGGGATCATACTTGTGTCCATCCTGAAGTAGTTGGTAACTTCAACAGGAATGAAAAGTGCATGGAATTGCTGGATGGAAAAAATGGAAAATCCTGCTATTTTTATCATGGTGTTCATAAAATTAGTAACCAACACACATTCCAGACCATTGAAGGAATGTACAAAGCCTGGGATATAGAAGAACTTGTCAGTCTGGGGAGAAAACTAAAGGCGTGTCCATATTATACAGCCCGAGAACTGACAGAAGATGCTGACATAATATTTTGTCCCTACAACTATCTTCTAGATGCACAAATAAGGGAAAGTATGGATATAAATCTGAAAGAACAGGTTGTCATTTTAGATGAAGCTCATAACATTGAAGACTGTGCTCGGGAATCAGCAAGTTATAGTGTAACAGAAGTTCAGCTTCGATTTGCTCGAGATGAGCTAGATAGTTTGGTCAACAGTAATATAAGGAAGAAAGACCATGAACCTCTACGAGCTGTGTGCTGTAGCCTTATTAATTGGTTAGAAGCAAACACTGAACATCTTGTAGAAAGGGATTATGAATCATCTTGTAAAATATGGAGTGGAAATGAAATGCTCTTAAATTTATACAAAATGGGCATCACTACTGCTACTTTTCCCATTTTGCAGGGACATTTATCTTCTGTTCTTCAAAAAGAAGAAAAAGTCTCACCAATTTTTGGTAAAGAGGAGACAATAGAAGTGCCTATTATTAGTGCTTCGACTCAAATAATGCTCAAAGGACTTTTTATGGTGCTTGAGTATCTTTTTAGACAAAATAGCAGATTTGCAGATGATTATAAAGTTGCTATTCAACAGACTTACTCCTGGACACATCACACTGATATTTCAGATAAAAATGGGTTCTTTGCTGTACCAAAAAATAAGAAAAGTTCACGACAGAAAAATGCAGTTCATGTGCTAAACTTTTGGTGCTTAAATCCAGCTGTGGCATTTTCAGATATTAATGGCAAAGTTCGGACGATTGTTTTGACATCTGGCACATTATCACCAATGAAATCCTTTTCTTCAGAGCTTGGTGTTACATTTACTATCCAACTAGAGGCCAATCATGTCATTAATAATTCACAGGTTTGGGTTGGTACCATTGGTTCGGGCCCTAAGGGTCGGAATCTGTGTGCTACCTTCCAGCATACTGAAACATTTGAGTTCCAGGATGAAGTGGGAGCACTTCTGTTATCTGTGTGCCAGACTGTGAGCCAAGGAATTTTATGTTTTTTGCCGTCTTACAAGTTACTAGAAAAATTAAAAGAACGCTGGCTCTACACTGGTTTATGGCATAATCTGGAATTGGTGAAGACAGTCATTGTAGAACCACAGGGAGGAGAAAAAACTGATTTTGATGAATTACTGCAGGTGTACTATGATGCAGTCAAGTACAGGGGAGAGAAAGATGGAGCTCTTCTTGTAGCAGTTTGTCGTGGTAAAGTGAGTGAGGGTCTGGATTTCTCAGATGACAATGCCCGTGCTGTCATAACAATAGGAATTCCTTTTCCAAATGTGAAAGATCTACAGGTTGAACTAAAGCGACAGTACAATGACCATCATTCAAAATTGAGAGGACTTTTACCTGGCCGCCAATGGTATGAAATTCAAGCATACAGGGCCTTAAACCAGGCCCTAGGTAGGTGTATTCGACACAAAAATGACTGGGGTGCTCTTATTCTAGTGGATGATCGCTTCAGGAATAACCCAAGTCGCTATATATCTGGACTTTCCAAATGGATAAGACAGCAGATTCAGCACCATTTAACCTTTGAAAGTGCCTTGGAGTCCTTGGCTGAATTTTCCAAAAAGCAGCAAAAACTCATTAATGTATCCAAAAAGGACAGAAAATGTACACAAGATGACTCTACTCTTGAAGTGGCCTGTTTGGAGAACAGTACCCCTACTTGTTTGTTGGAAGCGGCAAGTCATCTGTCACCAGAAAATCCTAGGGAAGATGAAGCAAAAATGCATGTCCAGGAACTACAATGTCCTAAAATGATGACTAAAAATCTATCTCCACCTAATGACATCATCTCCAGAAAGGAAAAACATGATCCAGGATCATTGGAAGAGTCTGTCCAGGCAGTGAAAGCAGAAAAAAATGTGATTTCCAGATCCACAAGGCCAACATTCAACAAACTAACAAAAAGAATTAGCTGGTCTGGCTTTAATTTGAGGGGACCATATTTTACTGATAAAATACAGACGAAAATACCTGAGCTCCAGTCATCAGAGAACTGTGCCTCTAGTACTTCCACTTTTGAAGCCGAAAAAATAGAAAATAAAACCATTTTGCCTCTCACTGTTAAGTCTGAGTCCTCAGATCTAACAGCAAACACATCATTTAGGCCATCCTCCCAGTCAGAAAGCACTGTGCCATCAATAGAGATTGATGCTACTCATACTAAAAAAGATGACTCAGAACAACTTCTCTGCTGTAAAGAAACCTTGGACCTGGATATTGCATTGTCTCTTGGAAGCAAAGAAGTTAGACATTCCAGTCCAAATAGATCTTTTGAAACAGAGGAGGAGGAAGAAGATGAGTCTATCTATTTTACACCTGAGCTTTATGATCCTGAAGATGCAGATGAAGAAAAAAGTGAGCTAATAGAAACTGATAGACTCAGTAATGATTCANTTTACATTTTAGCAGAAGACCTTTCTGAAATTGGAACTATGAAAGGAGTGGATTCAGTCAGAGAAATGAAAACTGAGGATTTCACAGATACAAAGTGGAATAGAATCATGCATACTGAAAAAAATGATGACATTGATAGTAATGTAAAATGTGTAAAAAAGTTGGAGCTGGTAAAAACTCATGGAATAGAAGTAACTTTAAGCAGCGTGGAGACAGGATTATCTTTAAATGCCATCTGGAATATGAAAGAATGTTCTTTATCCAGCTACTTAACAGTGTAG

Related Sequences

XP_004870491.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein [Heterocephalus glaber]

Length: 1256 aa      View alignments
>XP_004870491.1
MSSLCSEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSRQHCLLESPTGSGKSLALLCSALAWQQSLSGKPVDEGLNKKAEVPLSCCCTCHSRSSTHSDVNQETSHHFSSSATPPSERSGTSSACQDSPAKNTLAAKLSAKKQASKHRDENDDFQIEKKRIRPLETAQQIRKRHCFEKEVPHLDAQDALEDTLKFNSPLGKINSFSSQNPPGHCSRCSCSTKQGNSQESSHTIKKDHGGKFKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVHKISNQHTFQTIEGMYKAWDIEELVSLGRKLKACPYYTARELTEDADIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSLVNSNIRKKDHEPLRAVCCSLINWLEANTEHLVERDYESSCKIWSGNEMLLNLYKMGITTATFPILQGHLSSVLQKEEKVSPIFGKEETIEVPIISASTQIMLKGLFMVLEYLFRQNSRFADDYKVAIQQTYSWTHHTDISDKNGFFAVPKNKKSSRQKNAVHVLNFWCLNPAVAFSDINGKVRTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLYTGLWHNLELVKTVIVEPQGGEKTDFDELLQVYYDAVKYRGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRNNPSRYISGLSKWIRQQIQHHLTFESALESLAEFSKKQQKLINVSKKDRKCTQDDSTLEVACLENSTPTCLLEAASHLSPENPREDEAKMHVQELQCPKMMTKNLSPPNDIISRKEKHDPGSLEESVQAVKAEKNVISRSTRPTFNKLTKRISWSGFNLRGPYFTDKIQTKIPELQSSENCASSTSTFEAEKIENKTILPLTVKSESSDLTANTSFRPSSQSESTVPSIEIDATHTKKDDSEQLLCCKETLDLDIALSLGSKEVRHSSPNRSFETEEEEEDESIYFTPELYDPEDADEEKSELIETDRLSNDSXYILAEDLSEIGTMKGVDSVREMKTEDFTDTKWNRIMHTEKNDDIDSNVKCVKKLELVKTHGIEVTLSSVETGLSLNAIWNMKECSLSSYLTV