Details from NCBI annotation

Gene Symbol Rnf43
Gene Name ring finger protein 43, transcript variant X2
Entrez Gene ID 101711043

Database interlinks

Part of NW_004624871.1 (Scaffold)

For more information consult the page for NW_004624871.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF43 ENSCPOG00000003428 (Guinea pig)

Gene Details

ring finger protein 43

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003096, Guinea pig)

Protein Percentage 81.4%
CDS Percentage 83.67%
Ka/Ks Ratio 0.43093 (Ka = 0.1406, Ks = 0.3262)

RNF43 ENSG00000108375 (Human)

Gene Details

ring finger protein 43

External Links

Gene Match (Ensembl Protein ID: ENSP00000463069, Human)

Protein Percentage 87.45%
CDS Percentage 88.39%
Ka/Ks Ratio 0.23542 (Ka = 0.0699, Ks = 0.297)

Rnf43 ENSMUSG00000034177 (Mouse)

Gene Details

ring finger protein 43

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130685, Mouse)

Protein Percentage 83.42%
CDS Percentage 84.88%
Ka/Ks Ratio 0.22733 (Ka = 0.0945, Ks = 0.4158)

Rnf43 ENSRNOG00000007606 (Rat)

Gene Details

ring finger protein 43 (Rnf43), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010296, Rat)

Protein Percentage 84.7%
CDS Percentage 85.6%
Ka/Ks Ratio 0.22349 (Ka = 0.0885, Ks = 0.3962)

Genome Location

Sequence Coding sequence

Length: 2352 bp    Location: 259098..191546   Strand: -
>XM_004870329.1
ATGAGTGGTGGCCACCAGCTGCAGCTGGCTGCCCTCTGGCCCTGGCTGCTGATGGCTACCCTGCAGGCAGGCTTTGGACGCACTGGACTCGTATTGGCAGCAGCGGTGGAGTCTGAAAGATCAGCAGAACAGAAAGCTATTATCAGAGTGATCCCCTTGAAAATGGACCCCACAGGAAAACTGAATCTCACTTTGGAAGGTGTATTTGCTGGTGTTGCTGAAATAACCCCAGCAGAAGGAAAATTAATGCAGTCTCATCCCCTGTACCTGTGCAATGCCAGTGATGACGACAATCTGGAGCCTGGATTCATCAGTATTGTCAAGCTGGAGAGTCCCCGGAGGGCCCCTCGCCCCTGCCTGTCACTGGCCAGCAAGGCCCGGATGGCTGGCGAGCGAGGAGCCAGTGCTGTCCTCTTTGACATCACCGAGGATCGAGCTGCTGCTGAGCAGCTGCAGCAGCCCCTGGGGCTGACGTGGCCGGTGGTGCTAATCTGGGGTAATGATGCTGTGAAGCTGATGGAGTTTGTGTACAAGAACCGGAAGGCCCATGTGAGGATCGAGCTGAAGGAGCCCCTGGCCTGGCCGGACTATGATATGTGGATCCTCCTGACGGTGGTGGGCACTATCTTTGTGATCATCCTGGCTGCAGTGCTGCGTTTTCGATGTCGACCCCGCCACAGCAGACCGGATCCCCTTCAGCAGCGAACAGCCTGGGCCATCAGCCAGCTAGCCACCAGGAGGTACCAGGCCAGCTGCAGGAGGGCTCGGGCCGAGTGGCAGGACTCAGGTAGCAGCTGCAGCTCAGCCCCTGTGTGTGCCATCTGCCTGGAGGAATTCTCTGAGGGGCAGGAGCTCCGGGTCATTTCCTGCCTCCATGAATTCCACCGAACCTGCGTGGACCCCTGGCTGCATCAGCATCGGACTTGTCCGCTCTGCATGTTCAACATCGTAGAAGGAGATTCATTTTCCCACTCCCTGGGACCCTCTAGATCTTACCAGGAACCGGGCAGGAGACTCCACCTCATTCGCCAACATCCTGGCCATGCCCACTACCACCTCCCTGCTTCCTACCTGTTGGGCCCTTCTCGGAATTCAGGAGCTCGGCCACCACAACCTAGACCTTTCCTACTATCCCAGGAGCCAAGCATGGGCCTTCGGCATCAACGCCTCCCCAGAGCTGGAGCTGCACATCTCCGAACTTTAGGCGAGCAGCAGCGCCTGGCAGTGGCCCAGCACCCCCACGCACAGGGCCGGGGGCCAAGCCGCCTCCGATGTACCTCTCAGCATCCCACAGCTTGTGTGGTGCCCCTGCGCAGGGCCAGGCCTCATGACAGCAGCGGGTCTGGAGAAAGCTACTGCACAGAACGCAGTGGCTACCTAGCAGATGGTCCAGCCAGTGATTCCAGCTCGGGGCCCTGCCATGGCTCTTCCAGTGACTCAGTGGTCAACTGCACGGACGTCAGCCTGCAGGGCATCCATGGCAGCAGTTCTACCTTCCGCAGCTCCCTGAGCAGTGACTTTGATCCCTTGGTATACTGCAGCCCTGAAGGGGATCTTCACAAGGAGGGGACACAACCTAGTGTGACCTCTCGACCCCGTTCCTTGGACTCAGTGGTACCCACAGGGGAAACCCAGATCTCTAGCCATGTCCACTGCCACCGGCACCGGCACCATCACTACAAAAAGCGGTTCCAGTGGCATGGCAGGAAGCCTGGCTCAGAAACTGGGGTCTCCCAATCCAGGCCTGCTGCTTCTCGGACACAGCCTCAGCCAGAGCTACCTTTTCCCAATCAGCAAGTCACCAAATCCAACCCAGCAACCCCTTCAGGACAGTTCCCCAACCCACAGCGGTCCAGGGCCCTCACAGAGCCAGCCCCTGGCCCAGCTGAAGCTGCCAATCCAACCCCCAGTCCCAGTAGTCACTTGCAGAAATCCAGCCTCCCCATCCGACACACACAGAGAAAACGGCGGGGTGGTCCCTCAGAGCCCACGCCAGCCTCTCGGCCCCAGGACTTGACTGTGCACCCAGCTTGCCAGATGTTCCCCCATCACAACCCCAGCCTGGCATACCCTTGGCCCCCAGAGGCCCACCCATTGATCTTCAGACCTCCAGGCCTGGAGAGGAGGCTGCTACCAGAAGCCCCAGGCCCTTGTTACTCAAGTTCACAGTCAGTGTGGTTGTGTCTGAATCCACGCCAGCCTCTGGGACCACATCCACTCGGGGAGGGGCCTTCTGAGTGGAGTTCCGACACCCCAAAGGGCAGGCCATGCCCTTACCCACACTGTCAGGTGCTGCCAGCCCAGCCTGGCTCGGAGGAGGAGCTTGAGGAGGTGTGTGAACAGGCTGTGTGA

Related Sequences

XP_004870386.1 Protein

Rnf43 PREDICTED: E3 ubiquitin-protein ligase RNF43 isoform X2 [Heterocephalus glaber]

Length: 783 aa      View alignments
>XP_004870386.1
MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGKLNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCLSLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAVKLMEFVYKNRKAHVRIELKEPLAWPDYDMWILLTVVGTIFVIILAAVLRFRCRPRHSRPDPLQQRTAWAISQLATRRYQASCRRARAEWQDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRTCVDPWLHQHRTCPLCMFNIVEGDSFSHSLGPSRSYQEPGRRLHLIRQHPGHAHYHLPASYLLGPSRNSGARPPQPRPFLLSQEPSMGLRHQRLPRAGAAHLRTLGEQQRLAVAQHPHAQGRGPSRLRCTSQHPTACVVPLRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVVNCTDVSLQGIHGSSSTFRSSLSSDFDPLVYCSPEGDLHKEGTQPSVTSRPRSLDSVVPTGETQISSHVHCHRHRHHHYKKRFQWHGRKPGSETGVSQSRPAASRTQPQPELPFPNQQVTKSNPATPSGQFPNPQRSRALTEPAPGPAEAANPTPSPSSHLQKSSLPIRHTQRKRRGGPSEPTPASRPQDLTVHPACQMFPHHNPSLAYPWPPEAHPLIFRPPGLERRLLPEAPGPCYSSSQSVWLCLNPRQPLGPHPLGEGPSEWSSDTPKGRPCPYPHCQVLPAQPGSEEELEEVCEQAV