Details from NCBI annotation

Gene Symbol Mks1
Gene Name Meckel syndrome, type 1
Entrez Gene ID 101706375

Database interlinks

Part of NW_004624871.1 (Scaffold)

For more information consult the page for NW_004624871.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MKS1 ENSCPOG00000000507 (Guinea pig)

Gene Details

Meckel syndrome, type 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000447, Guinea pig)

Protein Percentage 92.65%
CDS Percentage 92.17%
Ka/Ks Ratio 0.17418 (Ka = 0.0384, Ks = 0.2207)

MKS1 ENSG00000011143 (Human)

Gene Details

Meckel syndrome, type 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000376827, Human)

Protein Percentage 89.27%
CDS Percentage 89.68%
Ka/Ks Ratio 0.16492 (Ka = 0.0535, Ks = 0.3247)

Mks1 ENSMUSG00000034121 (Mouse)

Gene Details

Meckel syndrome, type 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043790, Mouse)

Protein Percentage 87.63%
CDS Percentage 85.96%
Ka/Ks Ratio 0.12513 (Ka = 0.0668, Ks = 0.5337)

Mks1 ENSRNOG00000008635 (Rat)

Gene Details

Meckel syndrome, type 1 (Mks1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011500, Rat)

Protein Percentage 86.38%
CDS Percentage 85.19%
Ka/Ks Ratio 0.12795 (Ka = 0.072, Ks = 0.5629)

Genome Location

Sequence Coding sequence

Length: 1680 bp    Location: 63742..51129   Strand: -
>XM_004870311.1
ATGGCGGAGAATGTCTGGAACACTGACACCGGAGAAGCTGTGTATCGCTCCAGGGACCCCGTGCGCAACTTGCGCCTCCGAGTTCATCTGCAAAGAATCACATCAAGCAACTTTCTTCGTTACCAGCCTGTTGCCCAGCCGGGGAAGGACCTTATAGATTTGGCCACTTTTACGCCTCACCCAACTGCCAGTGGACACCGCCCAGATGAAGAGGAAGAGGAAGAGGTCGAGATTGGGTGGCAGGAGAAGCTCTTTAGCCAATTTGAAGTGGATCTGTACCAAAATGAAGCAGCCTGTCAGAGTCCTTTGGATTATCAGTACCGCCAAGAAATCTTGAAGCTGGAGAGGTCTGGTGGCAGGAAGAATCGACGAATCTTTACCTACACTGACTCTGACAGATACACCAACTTGGAGGAGCACTGTCAGAAAATGACCACCGCAGCCAATGAGGTGCCATCATTTTTGGTCGAGCGAACGGCAAATGTTAGGCGGCGACGGCAGGACAGGCGAGGAATGGAGGGTGGCATCCTCAAGTCACGCATTGTCACCTGGGAACCTTCAGAAGAGTTCATCAGGAGCAACCATGTCATTAACACGCCTCTTCAGACAATGTACATCATGGCCGACTTGGGGCCCTATGGAAAGCTTGGCTATAAGACATATGAACATGTGCTCTGTATTCTGAAGGTGGACAGCAATGGTGTGATCACAGTAAAACCTGACTTCTCTGGCCTCAAAGGACCCTACAGAGTTGAGACCGAGGGCGAGAAGCAGGAACTGTGGAAGTATACGATTGACAATGTGTCCTCCCTCACACAGCCGGAAGAGGAGGAGCGGGAACAGCGCATGTTCAAGGATCTTTATGGCCGACACAAGGAGTATCTTAGCAGCCTCGTGGGCACAGACTTTGAGATGACGGCCACAGGTGCCCTCCGGCTCTTTGTAAATGGAGAGGTAGTTTCAGCCCAAGGCTACGAGTATGACAATCTCTACGTCCATTTCTTTGTGGAATTGCCAGCTGCTAAATGGTCAAGCCCAGAATTCCATCAGCTCTCAGGAGTAACCCAGACCTGTGCCACAAAGTCCCTGGGAATGGACAACATAGCTTACTTCTCCTACCCATTCACATTTGAAGCATTCTTTCTCCATGAGGACGAATCAGCTGATGCTCTCCTGGAGTGGCCTGTGCTGTACTGTGAGGTCCGCTCCCTGGACTTCTGGCAGAGGTACCGTGTAGAAGGCTACGGGGCCGTGGTGCTGCCTGTCACCCCAGGTTCACACACCCTGACAGTGTCCACATGGAGGCCCATGGAGCTCGGTCCCATTGCTGAGATGAGGAGGTTCTTCATCGGCAGCTCTCTGGAGCTGGAGGACCTGACCTATGTGCGGATACCAGGAACCTTCAAGGGGGAGCGTCTCAGCCGCTTTGGACTCCGCACAGAGACCACAGGCAGTGTCACTTTCCGCCTGCACTGTCTGCAGCAGTCCAGGGCCTTCATGGAATCGAGCTCCCTGCGGAAAAGGATGCGGAGTGTGTTGGACCGTTTGGAAGGATTCAGCCAGCGGAGTTCCATTCACAATGTGCTAGAGGCCTTTCATCGAGCCCGGCGCCGCATGCAGGAGGCCCGAGACCGCCTCCCCCAGGACCTAGGGAGCCCCTCGGGGACCTTGGTCTCCTAG

Related Sequences

XP_004870368.1 Protein

Mks1 PREDICTED: Meckel syndrome type 1 protein [Heterocephalus glaber]

Length: 559 aa      View alignments
>XP_004870368.1
MAENVWNTDTGEAVYRSRDPVRNLRLRVHLQRITSSNFLRYQPVAQPGKDLIDLATFTPHPTASGHRPDEEEEEEVEIGWQEKLFSQFEVDLYQNEAACQSPLDYQYRQEILKLERSGGRKNRRIFTYTDSDRYTNLEEHCQKMTTAANEVPSFLVERTANVRRRRQDRRGMEGGILKSRIVTWEPSEEFIRSNHVINTPLQTMYIMADLGPYGKLGYKTYEHVLCILKVDSNGVITVKPDFSGLKGPYRVETEGEKQELWKYTIDNVSSLTQPEEEEREQRMFKDLYGRHKEYLSSLVGTDFEMTATGALRLFVNGEVVSAQGYEYDNLYVHFFVELPAAKWSSPEFHQLSGVTQTCATKSLGMDNIAYFSYPFTFEAFFLHEDESADALLEWPVLYCEVRSLDFWQRYRVEGYGAVVLPVTPGSHTLTVSTWRPMELGPIAEMRRFFIGSSLELEDLTYVRIPGTFKGERLSRFGLRTETTGSVTFRLHCLQQSRAFMESSSLRKRMRSVLDRLEGFSQRSSIHNVLEAFHRARRRMQEARDRLPQDLGSPSGTLVS