Details from NCBI annotation

Gene Symbol Snx6
Gene Name sorting nexin 6, transcript variant X1
Entrez Gene ID 101716031

Database interlinks

Part of NW_004624838.1 (Scaffold)

For more information consult the page for NW_004624838.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNX6 ENSCPOG00000006862 (Guinea pig)

Gene Details

sorting nexin 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006186, Guinea pig)

Protein Percentage 97.84%
CDS Percentage 95.27%
Ka/Ks Ratio 0.07222 (Ka = 0.0147, Ks = 0.204)

SNX6 ENSG00000129515 (Human)

Gene Details

sorting nexin 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000355217, Human)

Protein Percentage 97.13%
CDS Percentage 92.58%
Ka/Ks Ratio 0.04962 (Ka = 0.018, Ks = 0.3636)

Snx6 ENSMUSG00000005656 (Mouse)

Gene Details

sorting nexin 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005798, Mouse)

Protein Percentage 99.26%
CDS Percentage 89.82%
Ka/Ks Ratio 0.00948 (Ka = 0.0056, Ks = 0.5939)

Snx6 ENSRNOG00000005249 (Rat)

Gene Details

sorting nexin 6 (Snx6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007300, Rat)

Protein Percentage 99.26%
CDS Percentage 90.15%
Ka/Ks Ratio 0.01011 (Ka = 0.0057, Ks = 0.5609)

Genome Location

Sequence Coding sequence

Length: 1278 bp    Location: 2105640..2146064   Strand: +
>XM_004867573.1
ATGTCTCCCTTTGTATCTCCTCTATTCCATCCTCTCCCCCGGCGCGCTCCGCCCGCCCATCAGGAAGGCCTGGACGATGGCCCCGACTTCCTCTCGGAGGAAGACCGAGGACTTAAAGCAATAAATGTAGATCTTCAAAGTGATGCAGCTCTGCAGGTGGACATTTCTGATGCTCTGAGTGAGAGGGACAAAGTAAAATTCACTGTCCATACAAAGAGTTCGTTGCCCAATTTTAAACAAAATGAGTTTTCTGTTGTTCGACAACATGAGGAATTTATCTGGCTTCATGATTCCTTCGTTGAAAATGAAGACTATGCAGGTTATATCATTCCACCAGCACCACCAAGGCCTGATTTTGATGCTTCGAGAGAAAAGCTACAGAAGCTTGGAGAAGGGGAAGGGTCAATGACAAAGGAAGAATTCACAAAGATGAAACAGGAACTGGAAGCTGAGTATTTGGCAATATTCAAGAAGACAGTGGCGATGCATGAAGTGTTCCTGTGTCGTGTGGCAGCTCATCCTATTTTGAGGAAAGATTTAAATTTCCATGTCTTCTTAGAATATAATCAAGATTTGAGTGTTCGAGGAAAAAATAAAAAAGAGAAACTTGAAGATTTCTTTAAAAACATGGTCAAATCAGCAGATGGAGTCATTGTTTCAGGAGTAAAGGATGTAGATGATTTCTTTGAGCATGAACGAACATTCCTTTTAGAATATCATAACCGAGTTAAGGATGCATCTGCTAAATCTGACAGGATGACAAGATCCCACAAAAGTGCTGCAGATGATTACAATAGAATTGGATCTTCGTTATATGCTTTAGGAACTCAGGATTCTACAGATATATGCAAGTTTTTCCTTAAAGTTTCAGAACTGTTTGATAAAACAAGAAAAATAGAAGCACGAGTATCTGCTGATGAAGACCTCAAACTCTCTGATCTTTTAAAATATTACTTAAGAGAATCTCAAGCAGCTAAGGATCTCCTCTACCGAAGATCTCGGTCACTAGTAGATTATGAAAATGCTAATAAAGCGCTGGATAAAGCAAGGGCAAAGAATAAAGATGTTCTGCAGGCTGAAACTTCCCAACAACTATGTTGTCAGAAGTTTGAAAAAATATCTGAATCTGCAAAACAAGAACTTATAGATTTTAAGACAAGAAGAGTTGCTGCATTCAGAAAAAATTTAGTGGAACTTGCAGAATTAGAACTGAAACATGCAAAGGGTAACCTCCAGTTGCTGCAGAACTGCCTGGCAGTGTTGAATGGAGACACATAA

Related Sequences

XP_004867630.1 Protein

Snx6 PREDICTED: sorting nexin-6 isoform X1 [Heterocephalus glaber]

Length: 425 aa      View alignments
>XP_004867630.1
MSPFVSPLFHPLPRRAPPAHQEGLDDGPDFLSEEDRGLKAINVDLQSDAALQVDISDALSERDKVKFTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRGKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTRSHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT