Details from NCBI annotation

Gene Symbol Six5
Gene Name SIX homeobox 5
Entrez Gene ID 101704793

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SIX5 ENSCPOG00000014282 (Guinea pig)

Gene Details

SIX homeobox 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012868, Guinea pig)

Protein Percentage 94.55%
CDS Percentage 92.64%
Ka/Ks Ratio 0.11532 (Ka = 0.0273, Ks = 0.2365)

SIX5 ENSG00000177045 (Human)

Gene Details

SIX homeobox 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000316842, Human)

Protein Percentage 91.03%
CDS Percentage 88.81%
Ka/Ks Ratio 0.11155 (Ka = 0.0465, Ks = 0.4168)

Six5 ENSMUSG00000040841 (Mouse)

Gene Details

sine oculis-related homeobox 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045973, Mouse)

Protein Percentage 86.37%
CDS Percentage 85.21%
Ka/Ks Ratio 0.14023 (Ka = 0.0738, Ks = 0.5263)

Six5 ENSRNOG00000015349 (Rat)

Gene Details

Protein Six5

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020597, Rat)

Protein Percentage 84.7%
CDS Percentage 84.47%
Ka/Ks Ratio 0.15877 (Ka = 0.0837, Ks = 0.5273)

Genome Location

Sequence Coding sequence

Length: 2211 bp    Location: 7430525..7434737   Strand: +
>XM_004867136.1
ATGGCTACCTTGCCTGCTGAGCCGAGCGCTGGGCCGGCGGCCGGGGGGAAGGCGGTGGCGGCGGCAACCGAAGAGGAGGAGGAGGAAGCACGCCAGCTCTTGCAGACTTTGCAGGCGGCCGAGGGTGAGGCGGCGGCGGCGGCCGGGGCCGGGGCGGGCGAAGCGGCTGCGGGAGCGGAGGACTCGGGGTCCCCGGGCGTCCCCGGGTCACCCCCCGAGGCCGCTGCCGAGCCGCCCTCGGGCCTCCGCTTCTCGCCAGAGCAGGTGGCGTGCGTGTGCGAGGCGCTGCTGCAGGCGGGCCACGCCGGCCGCTTGAGCCGCTTCCTGGGCGCGCTGCCCCCGGCCGAGCGCCTACGTGGCAGCGACCCGGTGCTGCGCGCGCGGGCCCTGGTGGCCTTCCAGAGGGGCGAGTACGCCGAGCTCTACCGGCTCCTCGAGAGCCGGCCCTTCCCCGCCGCCCACCACGCCTTCCTGCAGGACCTCTACCTGCGCGCGCGCTACCATGAGGCTGAGCGGGCCCGCGGCCGCGCGCTGGGCGCAGTGGACAAATACCGACTGCGCAAGAAGTTCCCGCTGCCCAAGACCATCTGGGACGGCGAGGAGACCGTCTACTGCTTCAAGGAGCGCTCCCGCGCCGCGCTCAAGGCCTGCTACCGCGGCAACCGCTACCCGACCCCGGACGAGAAGCGCCGCCTGGCCACGCTCACCGGCCTCTCGCTCACGCAGGTCAGCAACTGGTTCAAGAACCGGCGACAGCGCGACCGAACCGGGGCTGGCGGCGGCGCTCCCTGCAAGAGTGAGTCTGATGGGAACCCCACTACTGAAGATGAGTCCAGCCGAAGTCCTGAGGACCTGGAGAGTGGAGTGGCCACCGTGGCTGCTGAGGCCCCCACCCAGAGCTCCATATTCTTGGGGGGGCCCACTCCTCCAGCTCCATGCCCTGCCTCCTCCTCCATCCTGGTGAACGGGAGCTTCCTGGCTGCCAGTAGCTCCCCGACAGTGCTCCTCAACGGCAGCCCTGTCATCATCAACAGCTTGGCCCTGGGCGAGGCCTCCAGCTTGGGCCCCCTGCTGCTGACAGGCGGAGGGGCCGCCCCTCCTCCACAGCCCAGTCCCCAGGGCACCAGCGAAGCCAAGACCTCCCTGGTCTTGGACCCTCAGACCGGTGAGGTTCGGCTGGAAGAGGCTCCATCTGAGGTCCCTGAGACCAAAGGGGCCCAGGTGGCTGCTTCATTGCCCACTGGAGAGGAGGTCTCAGGGCCCCTGCCCCAAGTGGTACCTGGCCCCCCATCTGCAGCCAACTTCTCTCTGCCCCCAGGACCAGTGCCCACGGTGGCTGCCCCCCAGGTGGTGCCACTGTCTCCACCCCCTGGGTATCCCACAGGCCTGGGTGCCACTTCCCCACTGTTGAACCTGCCCCAGGTGGTGCCTACTTCCCAGGTGGTGACCCTGCCCCAGGCCATGGGGCCACTGCAGCTGTTGGCAGCTGGCCCAGGCAGCCCTGTGAAGGTGGCAGCTGCAGCGGGCCCTGCCAATGTGCACCTGATAAACTCTGGGGTGGGCGTGACTGCCCTACAGCTGCCTTCGGCCACTGCCCCAGGAAACTTCCTCCTGGCCAACCCTGTATCCGGCAGCCCCATTGTCACAGGTGTGGCAGTGCAGCAGGGGAAGATCATCCTCACTGCCACCTTCCCCACTAGCATGCTGGTTTCCCAGGTCCTGCCACCAGCCCCCAGCCTGGCCCTTCCCCTGAAGCCAGAGACGACAATCTCCGTCCCTGAAGGAGCCCTCCCGGTGGTCCCCAGCCCCGCACTCCCAGAGGCCCATGCCTTGGGCACACTTTCTGCTCAGGTGCCGCCACCACCCACTGTGGCCACCTCTGTGGCCAGCCTGCCTTTCTCCTCGGAGTCCTCCAGCCTCCTGCCCAGCTTCCCAGCACCTCCGGCAGAGGGTCTGATGCTGTCACCTGCAGCTGTGCCTGTCTGGTCAGCAGGGCTAGAACTGAGCACAGGAGCAGAGGGACTGCTAGATGCAGAAAAGGGGCTGGAGACACAGGTCCCCCATGCTGTGCTGAGGCTGCCGGGCCCTGACCCCGAGGGGCTGCTCCTAGGGGCCAACGCAGCGGCCGAGGTTGACGAGGGGCTAGAAGCAGAGGCCAAGGTTCTGACTCAGCTGCAGTCAGTGCCTGTAGAGGAGCCCTTGGAACTGTGA

Related Sequences

XP_004867193.1 Protein

Six5 PREDICTED: homeobox protein SIX5 [Heterocephalus glaber]

Length: 736 aa      View alignments
>XP_004867193.1
MATLPAEPSAGPAAGGKAVAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGEAAAGAEDSGSPGVPGSPPEAAAEPPSGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLESGVATVAAEAPTQSSIFLGGPTPPAPCPASSSILVNGSFLAASSSPTVLLNGSPVIINSLALGEASSLGPLLLTGGGAAPPPQPSPQGTSEAKTSLVLDPQTGEVRLEEAPSEVPETKGAQVAASLPTGEEVSGPLPQVVPGPPSAANFSLPPGPVPTVAAPQVVPLSPPPGYPTGLGATSPLLNLPQVVPTSQVVTLPQAMGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKPETTISVPEGALPVVPSPALPEAHALGTLSAQVPPPPTVATSVASLPFSSESSSLLPSFPAPPAEGLMLSPAAVPVWSAGLELSTGAEGLLDAEKGLETQVPHAVLRLPGPDPEGLLLGANAAAEVDEGLEAEAKVLTQLQSVPVEEPLEL