Details from NCBI annotation

Gene Symbol Nucb1
Gene Name nucleobindin 1, transcript variant X2
Entrez Gene ID 101714966

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NUCB1 ENSCPOG00000009433 (Guinea pig)

Gene Details

nucleobindin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008469, Guinea pig)

Protein Percentage 93.6%
CDS Percentage 89.7%
Ka/Ks Ratio 0.06542 (Ka = 0.033, Ks = 0.5041)

NUCB1 ENSG00000104805 (Human)

Gene Details

nucleobindin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000385923, Human)

Protein Percentage 89.93%
CDS Percentage 87.16%
Ka/Ks Ratio 0.06705 (Ka = 0.0525, Ks = 0.7829)

Nucb1 ENSMUSG00000030824 (Mouse)

Gene Details

nucleobindin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033096, Mouse)

Protein Percentage 89.76%
CDS Percentage 85.26%
Ka/Ks Ratio 0.05002 (Ka = 0.0526, Ks = 1.0509)

Nucb1 ENSRNOG00000020889 (Rat)

Gene Details

nucleobindin 1 (Nucb1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028390, Rat)

Protein Percentage 88.89%
CDS Percentage 84.17%
Ka/Ks Ratio 0.04636 (Ka = 0.0573, Ks = 1.2362)

Genome Location

Sequence Coding sequence

Length: 1440 bp    Location: 5085478..5073022   Strand: -
>XM_004866976.1
ATGCTGGGATCGCGAGCTCGGGACTATCCACCGCCTGCCTCGCCTCCCACCAAGTGCGCCATGCCGCCCTCCGCGCCCCGCCGAGCCCTCGTCGTCTTGCTGTCGCCCCTCCTGTGGCTGCCGGCCGTGCTGCCCGTGCCCATCGAGCGGGCCGCTGCCAACCAGGAGCCGAGCCCCGCTACCGAGAGCCCGGACACGGGCCTGTACTACCACCGGTACCTCCAGGAAGTCATCAATGTGCTGGAGACGGACGGGCACTTCCGAGAGAAGCTGCAGGCCGCCAATGCTGAGGACATCAAGAGTGGGAAGCTGAGCCGAGAGCTGGACTTCGTCAGCCACCATGTCCGCACCAAGCTGGATGAGCTCAAGCGGCAGGAGGTGTCGCGGCTGCGGATGCTGCTCAAGGCCAAGATGGACGCCAAACAGGAGCCCAATGTTCAGGTGGATCACCTGAGTCTCCTGAAGCAGTTTGAACACCTGGACCCTCAGAACCAACACACGTTTGAGGCCCGAGACCTAGAACTGCTGATCCAGACAGCCACCCGGGACCTTGCCCAGTACGATGCGGCCCATCATGAAGAGTTCAAACGCTACGAGATGCTCAAGGAACACGAGAGACGCCAATATCTGGAGTCCCTGGGAGAGGAGCAGCGGAAAGAGGCAGAACGGAAGCTGGAAGAGCAACAGCGCCGGCACCGGGAACACCCCAAAGTCAATGTGCCAGGCAGCCAAGCACAGTTGAAGGAGGTGTGGGAGGAACTGGACGGATTGGACCCCAACAGGTTTAACCCCAAGACCTTCTTCATCTTGCATGATATCAACAGCGATGGGGTCCTGGATGAGCAGGAGCTAGAGGCCCTCTTCACCAAGGAGCTGGAGAAGGTGTATGATCCAAAGAATGAGGAGGATGACATGCGGGAGATGGAGGAGGAGCGGCTGCGCATGCGGGAGCATGTGATGAAGAACGTGGACACCAACCAGGACCGCCTTGTGACCCTAGAGGAGTTCCTCGCATCCACCCAGAGGAAGGAGTTTGGGGACACCGGAGAGGGATGGGAGACTGTGGAAATGCACCCTGCTTACACGGAGGAGGAGCTGAGGCGCTTCGAGGAGGAGCTGGCTGCCCGAGAGGCTGAGCTGAATGCCCAGGCCCAGCGCCTCAGCCAGGAGACCGAGGCCCTCGGGCGGTCACAGGACCAGCTTATAGCCCAGAGGCGAGAGCTGCAGCAGGCCGTTCTGCAAATGGAGCAGAGGAAGCAGCAGCAGCAAGACCAAAACCCACCCCCTGCCAACCCCCAGGGACAGCTCAAGTTCCACCCAGACACAGATGATGCTCCTGTCCCAGCTCCAGCCAGTGACCAGAAGGATGTGCAAGCTTCTGAAAAGAAAGCTCCCGAGCAGTCCCCAGAAGTGCCCCAGCTGGATTCCAAGCACCTCTGA

Related Sequences

XP_004867033.1 Protein

Nucb1 PREDICTED: nucleobindin-1 isoform X2 [Heterocephalus glaber]

Length: 479 aa      View alignments
>XP_004867033.1
MLGSRARDYPPPASPPTKCAMPPSAPRRALVVLLSPLLWLPAVLPVPIERAAANQEPSPATESPDTGLYYHRYLQEVINVLETDGHFREKLQAANAEDIKSGKLSRELDFVSHHVRTKLDELKRQEVSRLRMLLKAKMDAKQEPNVQVDHLSLLKQFEHLDPQNQHTFEARDLELLIQTATRDLAQYDAAHHEEFKRYEMLKEHERRQYLESLGEEQRKEAERKLEEQQRRHREHPKVNVPGSQAQLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRKEFGDTGEGWETVEMHPAYTEEELRRFEEELAAREAELNAQAQRLSQETEALGRSQDQLIAQRRELQQAVLQMEQRKQQQQDQNPPPANPQGQLKFHPDTDDAPVPAPASDQKDVQASEKKAPEQSPEVPQLDSKHL