Gene Symbol | Col15a1 |
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Gene Name | collagen, type XV, alpha 1 |
Entrez Gene ID | 101708400 |
For more information consult the page for NW_004624825.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Protein Percentage | 86.08% |
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CDS Percentage | 88.44% |
Ka/Ks Ratio | 0.36032 (Ka = 0.0856, Ks = 0.2377) |
collagen, type XV, alpha 1
Protein Percentage | 79.54% |
---|---|
CDS Percentage | 83.47% |
Ka/Ks Ratio | 0.34845 (Ka = 0.1288, Ks = 0.3696) |
collagen, type XV, alpha 1
Protein Percentage | 77.53% |
---|---|
CDS Percentage | 78.25% |
Ka/Ks Ratio | 0.25778 (Ka = 0.1594, Ks = 0.6183) |
collagen alpha-1(XV) chain precursor
Protein Percentage | 77.32% |
---|---|
CDS Percentage | 79.1% |
Ka/Ks Ratio | 0.25788 (Ka = 0.1516, Ks = 0.588) |
>XM_004865060.1 ATGGCGCCAAGGAGCAACTGGTGCCGGCGGTTGCTGCTGTCCATTTCTGCGCTCCTGTCCGCTGTCACCCGGACGCGCGTCTCGACAGACTCAGCCTCCCAAGGCCATCTGGACCTCACACAGCTCATCGGTGTCCCACTGCCCTCCTCCGTGTCCTTTGTCACAGGCTATAATGGCTTCCCAGCTTACAGCTTCGGACCTGGTGCCAACATAGGTCGCCCAGCCAGGACCCTCATCCCACCTGCCTTCTTCAGGGACTTTGCCGTCAGTGTCATGGCCAAGCCCAGCAGCACCCGAGGCGGGGTGCTTTTTGCCGTTACTGACGCCTTCCAGAAGGTCATTTACCTAGGCCTGCGGCTCTCGGGAGTGCAGGATGGCCACCAGCGGGTCATCCTTTACTACACGGAGCCTGGCTCCCACCTGTCCCACGAAGCTGCTGTTTTCTCGGTGCCTGTGATGACCAACAGGTGGAACCACTTTGCTGTGATCATCCAGGGGGAGGAAGTGACCCTGCTCATGGACTGCGAGGAGCACAGCCATGTCCTCTTCCAGCGGTCCTCCCAGCCTTTGACTTTCGAGCCCAGCACAGGAATCTTCGTGGGCAGCGCAGGTGCCACAGGGCTGGACAAATTCACTGGGTCCATACAGCAGCTGACCATCCACGCTGACCCCAGGGTTCCAGAGGAGCTGTGTGAAGCCCAGGAGTTGTCGGCATCAGGAGAGGGCAGCGGACTTCAGGAGACTGACACTGTCGCTGAGACCTTAGAGGCCATCACCTACACTCAAGCTCTGCCTAAAGAAGCAAAAGTTGAACCTATAAACATACCTCCAATCTCATCCTCTCCCCCTCCCCTGGAGGACATGGAGCTTTCTGGTGAACCTGTACCAGAAGGGACCCCAGAAACCAACTTAAGCATCAGCCAACACAACAGCCCTGAGCAAGGGTCCGGCGAGATCCTGAATGACACGCTGGAGCAGGTTCATTCTCTGGATGGAGACGCCATTTCTGATGTTGGCTCAGGAGACAGGACCTTCCTTGGTGCCACTGAAGAACAGGGCTCTGCAGCAACAGCAATAGGGGAGGATGAGGTGACCATCACCACAGCCCGGGAGGCAGAGGTCAGCAGCGTGCCCACAGGAGGACCAACCCTGGTCATGTCCACCCTAAACCCTCGGGAAGGGACCGCCCCAGGTCTGGAGGACGAAGAAGGTTCAGCAGCAGTGGGAGCAGGGGAGGCCGAGGTGCCCGTCAGCACTGCTGGGGAAGTAGAGTCAGGCAGCGTGTCCACTGTGGGGCCCACCCTCACCATGTCCACCCAGAGCCCCAGGGAAGAGACCACGCTGGGTCCAGGCAAAGAATGGTTAACCTCAGTTGCAGCTCCCACAGAAGTTCCCCTCAGTACTCCTGGAGAAGAGGAAGCCAGTGGAGCCTCCACAGACAACCTAGCTGTCCTCACACCCACAGTGGCCCCTGCACATGCCAGCAGGGCCTCCACAGATGGCCTGGCTGTACCTGATGACAAGGAAGACTTGGAGCCCCTGGCCACCGCTGGCAGAGAGGAGACTGGCAGCGCTCCCCCTGATGGGCTGCCGCTCCCGGTACCCACAGCGGCTCCTGAGGGACGGGTCACTCTGGCTCAACTAGTACATGGGGAAATGGAAGGACAGTCTGGACCTGAAGGAGAAAAGGTGGGTACCGAGGCAGTGGGCTCTGGCCTGGGCTGGGCCCTGGACATCGGCTCTGGCTCCGGGGACCTGGTGGACCAAGAGGAGTTCCTAAGGGGTCTCCCAGGCCCTCCAGGACCACCTGGCTTACCTGGGATTCCAGGAAAACCAGGAACTGATGTTCTTATGGGGCCTCCTGGCTCTCCTGGAGAAGATGGAGCTGCTGGTGAACCTGGGCTCCCGGGCCCTGAAGGAGAGCCTGGACTTGATGGAGCTGTGGGGCGTCCTGGGATGAAAGGGGAGAAGGGAGCAAGAGGGCCTAATGGCTCAGTTGGTGAAAAGGGCGACCCTGGCAACAGAGGCTTACCAGGGCCCCCAGGGAAAAATGGACAAGCTGGCACTCCTGGAGTCACGGGACCTCCGGGGCCCCCTGGACCCCCAGGGCCCCCAGGTCCTGGATGTGCAACAGGACTGGAATTTGAGGATACTGAGGGCTCGGGAAATATCAGGCTGCTGAATGAACCCAGAATCTCCAGGCCAACTGTTTCCAGTGGTCTCAAAGGAGACAAAGGAGACCAGGGACCCAAGGGTGAAAGGGGACTGGATGGAATCAGCACTGTGGGACCTCCAGGACCCAGGGGTCCCCCTGGGCGGATCGAGATCTTGTCTAGTTCTTTGGTCAACATCACTCATGGATCCTTGAATTTCTCCAACATTCCTGAGCTCCTAGGGCCTCCGGGGCCTGATGGTGTGCCTGGGCTGCCTGGATTCCCAGGCCCTAGAGGACCAAAAGGTGACACTGGCTTGCCTGGATTTCCAGGACTCAAAGGAGAACAGGGTGAGAAGGGCGAGCCAGGTGCCATCCTGACGGGGGATGTTCCTCTGGAAAGGCTGAAGGGGAAAAAGGGTGAGCCTGGACTGCATGGAGCCCCTGGACCAATGGGTCCCAAGGGACCACCAGGACACAAAGGAGAATTTGGCCTCCCTGGACGACCTGGTCGCCCAGGACTGAATGGCATCAAGGGTGCCAAAGGAGATCGAGGAATAATGATGCAGGGCCCACCTGGCCTACCTGGTCCTCCAGGCCCCCCAGGACCACCTGGAGCTGTGGTTAACATCAAAGGAGCTGTGTTCCCAGTACCTGTCCGGCCACACTGCAAAATGCCACTTGGTACCACACAACCTGGGGATCCAGAGCTCATCACCTTCCACGGAGTTAAAGGAGAGAAAGGATCCTGGGGTCTTCCTGGCTCAAAAGGAGAAAAAGGCGACCAAGGAGCCCAGGGACCACCAGGTCCTCCTGTTGATCCAGCTTACCTGAGACATTTCCTGAACAGCTTGAAGGGGGAGAATGGAGACAGGGGATTCAAAGGAGAAAAAGGAGATTCTAATGGCAACTTCTTTGTGGCTGGGTCTCCAGGCCTGCCAGGAAATCCAGGCCTGGCTGGACAGAAAGGGGAGACTATCATTGGACCCCAAGGACCCCCAGGAATTCCTGGCCTGCCTGGGCCACCTGGTTTTGGAAGACCTGGTGCCCCTGGGCCACCAGGACCCCCTGGGCCTCCAGGACCTCCCGCTATTCTGGGTGCAGCTGTGGCTCTTCCAGGCCCACCTGGCCCTCCAGGACAGCCAGGGCTTCCCGGATCCAGAAATTTGGTCACGGCATTCAGCAGTATGGATGACATGCTGCAGAAAGCACATTTGGTCATAGAAGGAACATTCATCTACCTGAGGGACAGCACAGAGTTCTTCATTCGCGTCCGAGATGGCTGGAGAAAATTACAGCTGGGAGAACTCATCCCCATCCCTGCCGACAGTCCTCCACCCCCTGCGCTTTCCAGCAATTCATATCAGCTCCAGCCTCCACTGAACCCTATTTTAAGTGCCAATTACGAGAATCCTGTGCTGCACTTGGTTGCTCTAAACATGCCATTTTCTGGGGACATTAGAGCTGATTTTCAGTGCTTCCAACAGGCCAGGGCTGCAGGACTATTGTCCACTTTCCGAGCATTCTTATCTTCCCATTTGCAAGATCTCTCCACAGTTGTGAGGAAGGCAGAGAGATACAGCCTTCCAATAGTAAACCTCAAGGGCCAAGTACTTTTTAATAATTGGGACTCGATTTTTTCTGGTGATGGAGGTCAGTTCAATACACATGTTCCAATATACTCCTTTGATGGCCGAGATGTGTTGACAGATCCTTCTTGGCCCCAGAAGGTCGTTTGGCATGGCTCCACCACCCATGGTGTCCGTCTTGTGGATAAGTACTGTGAAGCGTGGCGAACGGCAGACATGGCAGTCACAGGATTTGCCTCGCCACTGAACACGGGGAAGATTCTGGACCAGAAAGCATATAACTGTGCTAATAGGCTAATTGTTCTGTGTATTGAAAACAGTTTCATGACAGATGCTAGGAAGTAA
Col15a1 PREDICTED: collagen alpha-1(XV) chain [Heterocephalus glaber]
Length: 1361 aa View alignments>XP_004865117.1 MAPRSNWCRRLLLSISALLSAVTRTRVSTDSASQGHLDLTQLIGVPLPSSVSFVTGYNGFPAYSFGPGANIGRPARTLIPPAFFRDFAVSVMAKPSSTRGGVLFAVTDAFQKVIYLGLRLSGVQDGHQRVILYYTEPGSHLSHEAAVFSVPVMTNRWNHFAVIIQGEEVTLLMDCEEHSHVLFQRSSQPLTFEPSTGIFVGSAGATGLDKFTGSIQQLTIHADPRVPEELCEAQELSASGEGSGLQETDTVAETLEAITYTQALPKEAKVEPINIPPISSSPPPLEDMELSGEPVPEGTPETNLSISQHNSPEQGSGEILNDTLEQVHSLDGDAISDVGSGDRTFLGATEEQGSAATAIGEDEVTITTAREAEVSSVPTGGPTLVMSTLNPREGTAPGLEDEEGSAAVGAGEAEVPVSTAGEVESGSVSTVGPTLTMSTQSPREETTLGPGKEWLTSVAAPTEVPLSTPGEEEASGASTDNLAVLTPTVAPAHASRASTDGLAVPDDKEDLEPLATAGREETGSAPPDGLPLPVPTAAPEGRVTLAQLVHGEMEGQSGPEGEKVGTEAVGSGLGWALDIGSGSGDLVDQEEFLRGLPGPPGPPGLPGIPGKPGTDVLMGPPGSPGEDGAAGEPGLPGPEGEPGLDGAVGRPGMKGEKGARGPNGSVGEKGDPGNRGLPGPPGKNGQAGTPGVTGPPGPPGPPGPPGPGCATGLEFEDTEGSGNIRLLNEPRISRPTVSSGLKGDKGDQGPKGERGLDGISTVGPPGPRGPPGRIEILSSSLVNITHGSLNFSNIPELLGPPGPDGVPGLPGFPGPRGPKGDTGLPGFPGLKGEQGEKGEPGAILTGDVPLERLKGKKGEPGLHGAPGPMGPKGPPGHKGEFGLPGRPGRPGLNGIKGAKGDRGIMMQGPPGLPGPPGPPGPPGAVVNIKGAVFPVPVRPHCKMPLGTTQPGDPELITFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPPVDPAYLRHFLNSLKGENGDRGFKGEKGDSNGNFFVAGSPGLPGNPGLAGQKGETIIGPQGPPGIPGLPGPPGFGRPGAPGPPGPPGPPGPPAILGAAVALPGPPGPPGQPGLPGSRNLVTAFSSMDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWRKLQLGELIPIPADSPPPPALSSNSYQLQPPLNPILSANYENPVLHLVALNMPFSGDIRADFQCFQQARAAGLLSTFRAFLSSHLQDLSTVVRKAERYSLPIVNLKGQVLFNNWDSIFSGDGGQFNTHVPIYSFDGRDVLTDPSWPQKVVWHGSTTHGVRLVDKYCEAWRTADMAVTGFASPLNTGKILDQKAYNCANRLIVLCIENSFMTDARK