Details from NCBI annotation

Gene Symbol Ncbp1
Gene Name nuclear cap binding protein subunit 1, 80kDa
Entrez Gene ID 101698074

Database interlinks

Part of NW_004624825.1 (Scaffold)

For more information consult the page for NW_004624825.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NCBP1 ENSCPOG00000012573 (Guinea pig)

Gene Details

nuclear cap binding protein subunit 1, 80kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011311, Guinea pig)

Protein Percentage 98.8%
CDS Percentage 95.68%
Ka/Ks Ratio 0.04283 (Ka = 0.0073, Ks = 0.1697)

NCBP1 ENSG00000136937 (Human)

Gene Details

nuclear cap binding protein subunit 1, 80kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000364289, Human)

Protein Percentage 99.49%
CDS Percentage 94.14%
Ka/Ks Ratio 0.01077 (Ka = 0.0029, Ks = 0.2667)

Ncbp1 ENSMUSG00000028330 (Mouse)

Gene Details

nuclear cap binding protein subunit 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030014, Mouse)

Protein Percentage 97.85%
CDS Percentage 89.11%
Ka/Ks Ratio 0.01779 (Ka = 0.0099, Ks = 0.5573)

Ncbp1 ENSRNOG00000023605 (Rat)

Gene Details

nuclear cap binding protein subunit 1 (Ncbp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000038713, Rat)

Protein Percentage 97.97%
CDS Percentage 89.16%
Ka/Ks Ratio 0.01666 (Ka = 0.0093, Ks = 0.5591)

Genome Location

Sequence Coding sequence

Length: 2373 bp    Location: 3206285..3164700   Strand: -
>XM_004864971.1
ATGTCGCGGCGGCGGCACAGCGACGAGAATGACGGTGGACAGCCTCACAAAAGGAGAAAGACTTCTGATGCCAGCGAAACTGAAGATCACTTGGAATCTTTAATATGCAAAGTAGGAGAAAAGAGTGCCTGCTCTTTGGAGAGCAATCTAGAAGGTTTGGCTGGTGTTTTGGAAGCTGATCTTCCTAACTACAAGAGCAAGATCTTAAGGCTTCTTTGTACAGTTGCACGTCTGTTACCTGAGAAGTTGACAATTTATACAACACTAGTTGGACTTCTGAATGCCAGGAATTACAACTTTGGTGGAGAATTTGTAGAAGCCATGATTCGTCAACTTAAGGAATCGTTGAAGGCAAACAATTATATTGAAGCTGTATATTTGGTTCGTTTTTTATCTGATCTTGTGAATTGTCATGTGATTGCTGCCCCATCAATGGTTGCTATGTTTGAAAATTTTGTAAGTGTAACTCAGGAAGAAGATGTACCTCAGGTACGACGGGATTGGTACGTGTATGCATTTTTGTCATCTTTGCCCTGGGTTGGAAAGGAGTTGTATGAAAAGAAAGATGCAGAGATGGACCGCATCTTTGCCAACACTGAAAGCTATCTTAAAAGACGCCAAAAGACCCATGTGCCCATGTTACAAGTATGGACTGCTGATAAACCACATCCACAAGAAGAGTATTTAGATTGCCTGTGGGCCCAGATCCAGAAATTGAAAAAGGATCGCTGGCAGGAACGGCACATCCTCAGACCTTATCTTGCCTTTGATAGCATCCTCTGTGAAGCACTACAGCATAATCTGCCTCCTTTTACACCACCTCCCCACACTGAAGATTCTGTGTACCCGATGCCAAGGGTTATCTTTAGAATGTTTGATTATACAGATGATCCTGAGGGTCCTGTGATGCCAGGGAGTCACTCAGTGGAAAGGTTTGTGATAGAGGAGAACCTCCACTGCATCATTAAGTCACACTGGAAGGAAAGGAAGACCTGTGCTGCACAGCTAGTGAGCTATCCAGGGAAGAACAAGATCCCCTTGAACTACCACATAGTTGAGGTGATCTTTGCAGAGCTGTTTCAACTTCCAGCACCCCCCCACATTGATGTGATGTACACAACACTTCTCATTGAATTGTGCAAACTTCAGCCTGGCTCTCTTCCCCAAGTTCTTGCACAGGCAACTGAAATGTTATACATGCGTTTGGACACAATGAATACTACATGTGTAGACAGGTTTATTAATTGGTTTTCTCACCATTTAAGTAACTTTCAGTTCCGTTGGAGCTGGGAAGATTGGTCAGATTGTCTGGCTCAAGATCCTGAAAGTCCCAAACCAAAGTTTGTAAGAGAAGTTTTAGAAAAATGTATGAGGTTGTCTTACCATCAGCGTATCTTAGATATTGTTCCTCCTACCTTCTCCGCTCTATGTCCTGCAAATCCAACCTGCATTTACAAATACGGAGATGAAAGTAGCAATTCACTTCCTGGACATTCTGTGGCCCTGTGTTTAGCTGTTGCTTTTAAAAGTAAGGCAACCAATGATGAAATCTTCAGCATTTTGAAAGATGTACCGAATCCTAACCAGGATGATGATGATGATGAAGGTTTCAGTTTTAACCCTTTGAAAATAGAGGTCTTTGTACAGACTCTGCTACACTTGGCAGCCAAATCATTTAGCCACTCCTTCAGTGCTCTTGCAAAGTTTCATGAGGTCTTCAAAACTCTAGCAGAAAGTGACGAGGGAAAGTTACATGTGCTAAGAGTTATGTTTGAAGTCTGGAGGAACCATCCACAGATGATTGCTGTACTTGTTGATAAGATGATTCGTACACAGATTGTTGACTGTGCTGCAGTAGCAAATTGGATCTTCTCTTCAGAACTATCTCGTGACTTTACTAGATTATTTGTATGGGAAATCTTGCACTCTACAATTCGTAAGATGAACAAACATGTACTGAAGATCCAGAAAGAGCTAGAAGAAGCTAAAGAGAAACTGGCAAGGCAACACAAACGGCGAAGTGATGATGACGACAGAAGCAGTGACAGGAAAGATGGGGCCCTTGAGGAGCAAATAGAAAGACTGCAGGAAAAAGTGGAATCTGCCCAAAGTGAACAGAAGAACCTTTTTCTCGTTATATTTCAGCGTTTTATCATGATCTTAACAGAGCACTTGGTAAGATGTGAAACTGATGGGACCAGTGTATTAACACCATGGTATAAGAATTGTATAGAGAGGCTCCAGCAGATCTTCCTGCAGCATCACCAGATAATCCAGCAGTACATGGTGACCCTAGAGAATCTTCTCTTCACTGCCGAATTAGACCCTCATATCCTGGCTGTATTCCAGCAGTTCTGTGCGCTGCAGGCCTAA

Related Sequences

XP_004865028.1 Protein

Ncbp1 PREDICTED: nuclear cap-binding protein subunit 1 [Heterocephalus glaber]

Length: 790 aa      View alignments
>XP_004865028.1
MSRRRHSDENDGGQPHKRRKTSDASETEDHLESLICKVGEKSACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYIEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELFQLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFRWSWEDWSDCLAQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPANPTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAVFQQFCALQA