Gene Symbol | Clstn1 |
---|---|
Gene Name | calsyntenin 1 |
Entrez Gene ID | 101706826 |
For more information consult the page for NW_004624818.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Protein Percentage | 92.44% |
---|---|
CDS Percentage | 89.91% |
Ka/Ks Ratio | 0.06865 (Ka = 0.0349, Ks = 0.5084) |
calsyntenin 1
Protein Percentage | 92.24% |
---|---|
CDS Percentage | 87.06% |
Ka/Ks Ratio | 0.04969 (Ka = 0.0381, Ks = 0.7659) |
calsyntenin 1
Protein Percentage | 91.4% |
---|---|
CDS Percentage | 86.22% |
Ka/Ks Ratio | 0.04785 (Ka = 0.0413, Ks = 0.8623) |
calsyntenin 1 (Clstn1), mRNA
Protein Percentage | 91.89% |
---|---|
CDS Percentage | 85.86% |
Ka/Ks Ratio | 0.03865 (Ka = 0.0382, Ks = 0.9873) |
>XM_004863923.1 ATGTCCTCTGCAGGTTCAGAGCCGGGTACAGGCGCAGTGACTGCCAAGGGCCACACCAAAGTGGCCTGGGAAGTTTGTGTCCCCTCCGAGTACCGCTGCACATCTCCTCTGTACAATGGAGCCGCTGAGTCTCAGGGCGCAGTGCCCCAGCGTGGGACGCTGCTGGGGTCCGGCAGCGAGAAGGGGCGCCGGGCCGGGACACAGGGAGAAGGGACGACCCCAGACGTCCCCGGCGTCCTCTGCGTTTGGGGGGCTGTGGCACCGTCGCAAGCCCCGCGGATCCCTCAGGAAGAGCCAGCACCGCCACCGCGAGTCCCCGTCCCCGTCCCCGACCTGAGCCGGCTGACCCCGGCCTCGGACGCCTCTCCCGACCCGAGCTCGCTCAGGTCCCCGCCCTCGGCAGAGGATGCCGCAGAGGTTCAGGGAGGGACGGGGCGGCCCGCAGGGAGGCGCTGGGGGGTCCGGGCTCCTCCGGGGTGCGAGGGCGGGGAGCCCGGGTCCTTCGGGTGCAGAGGAGGAGCGCCCCGGGCGTGGAGGCCCCAGCACCGCTCGGAGGCGCGCGTGGGGAATGAGGGGACAGCGACGAGGGGAGCGAGACTGGCGGGGCCGGGCGGGGGCGCGGCCCTGGGGGCCAATGGGGAGCCCGCCCTCGGGCGCGCCCCCTCCGGCCGCGCGCTCCCGCGTCCGCCTGGTGCGCGCGCGCCGGGCGCCGCTCCCTGCCCGCCCCCTCCCGCGCGCCGCGCCCGCCCCGCCCCGCCCTGCCGGTCCCCTTGCCGGACCGAAGCGCGCGCCGACGCCGCCGCCATTTTAGTCGCCGCCGCCGCCTCAGCGAAGCGCTGCTCGAGGCGGGAGGGCGCCGCGGCCGGAGCGGGCCCAGGGCTCGGCACGGCGCCTCCCGCTCTGCCCCCGGCCGCTCGCCGCGCCGCTCCGCAGCGGCCGGCCGCCGGGCTGCTGCTCGCCGGGCTGCTGTGCGGCGGCGGGGTCTGGGCCGCGCGAGTTAACAAGCATAAGCCCTGGCTGGAGCCCACCTACCACGGGATTGTGACTGAGAACGACAACACGGTGCTGCTCGACCCCCCCCTGATGGCGCTGGATAAGGACGCGCCTCTGCGCTTTGCAGAGAGTTATGAGGTGACAGTCACCAAAGAAGGTGAGATTTGTGGCTTTAAAATTCACGGGCAGAATGTCCCCTTTGATGCAGTGGTAGTGGATAAATCCACTGGCGAGGGGATAATTCGCTCCAAAGAGAAACTGGACTGTGAGCTGCAGAAAGACTACACATTCACCATCCAGGCCTACGACTGCGGGAAGGGCCCCGACGGCACCAGCATGAAGAAGTCTCATAAATCAACTGTCCACATCCAGGTGAACGATGTGAATGAGTATGCGCCTGTGTTCAAGGAGAAGTCCTACAAGGCGACGGTCACCGAGGGCAAGCAGTATGACAGCATCCTGAGGGTGGAGGCCGTGGACGCAGACTGCTCCCCTCAGTTCAGTCAGATCTGCAGCTATGACATCGTCACTCCTGATGTGCCCTTCGCTGTGGACAAAGATGGTTACATAAAGAACACCGAGAAGCTGAACTATGGGAAGGAGCGTCAGTATAAGCTGACCGTCACGGCCTATGACTGTGGGAAGAAGAGGGCTACGGAAGATGTTCTGGTGAAGATCAGCATCAAGCCTGCCTGCACACCTGGGTGGCAAGGCTGGAGCAACAGGGTTGAATACGAACCTGGCACCGGCGCTCTGGCTGTCTTCCCCAACATCCACCTGGAGACGTGTGACGAGCCAGTGGCCTCAGTGCAGGCCACGGTGGAGCTGGAGACCAGCCACATCGGGAAGGGCTGCGACCGAGATACCTACTCTGAGAAGTCCCTCCACAGGCTGTGCGGGGCTGCTGCGGGCACCGCCGAGCTGCTTCCCTCCCCTGGCAGCTCCTTCAACTGGACCGTTGGCCTCCCCACCGACAACGGCCATGACAGTGACCAGGTCTTTGAGTTCAACGGCACTCAGGCAGTGAGGATCCCAGATGGTGTTGTGTCCATCAGCCCTAAGGAGCCCTTTACGATTTCCGTGTGGATGAGGCACGGGCCTTTCGGCAGGAGGAAGGAGACGATTCTTTGCAGTTCGGACAAGACAGATATGAACCGACATCACTACTCGCTCTATATCCATGGGTGCAGGCTGATTTTCCTCCTGCGTCAGGATCCTTCCGAGGAGAAGAAATACAAACCTGCAGAATTCCACTGGAAGTTGAATCAGGTCTGTGATGAGGAATGGCACCACTTCGTCCTCAACGTGGAGCTCCCGAGTGTGACTCTGTACGTGGATGGCGTTTCCCATGAGCCCTTCTCTGTGACCGAGGATTATCCACTCCATCCATCCAAGATAGACACCCAGCTCGTGGTTGGGGCTTGCTGGCAAGAGTATTCAGGAGTTGAAAATGACAATGACACTGAACCTGTGACTGTGGCCTCCGCAGGAGGTGACCTGCACATGACCCAGTTTTTCCGAGGGAACCTGGCCGGCCTAACCGTCCGGACCGGAAAACTCGCAGACAAGAAGGTGATCGACTGTCTGTACACCTGCAAAGAGGGGTTGGACCTCCAGGTCCCCGAGGACAGCAGCGCCGTGCAGGTCCGACCCAGCCCCGGCCAGTCGGTGTTGACTCTGGAGGGTGATGACATTGGGGAGCTAGACAAGGCCATGCAACACCTCTCCTACCTGAACTCGCGGCAGTTCCCCACGCCGGGCATCCGGAGACTCAGAGTCACCAGCACGGTCAAGTGCTTTCATGAGGCCACCACCTGCATCCAGGTCCCCCCAGTCGAGGGCTACGTGATGGTTTTGCAGCCTGAAGAGCCCAAGATCAGCCTCAGCGGCGTCCACCATTTTGCCCGTGCGGCTTCTGAGTTTGAGAGCTCCGAGGGGGTCTTCCTGTTCCCCGAGCTGCGGATCATCAGCACCATCACGAGGGAGGTGGAGCCCGAGGGGGACGGGGCCGAGGACCCCACAGTCCAAGAGTCCCTGGTGTCTGAGGAGGTTGTGCATGACCTGGATACCTGCGAGGTCACAGTGGAGGGAGAGGAGCTGAACCTGGAGCAGGAGAGCCTGGAGGTGGACGAGGCCCGGCTGCAGCAGAAGGGCATCGAAGTGAGCCGCTCGGGCCTGGGCATGGTCCTCAGAGGGGTGGAGACCATGGTCAGCTATGAGGAGGTTTTGCACCTCCTTCGATATCGGAACTGGCATACCAGGTCCCTGCTTGATCGGAAGTTCAAGCTCATCTGCTCTGAGCTGAATGGTCGCTACCTGAGTAATGAGTTTAAGGTGGAGGTGAACGTGATCCATACGGCCAACCCTGTGGAACATGCCAACCACATGGCTGCCCAGCCACAGTTTGTTCACCCTGAACATCACTCCTTTGTGGACCTCTCAGGTCACAACCTGGCCAGTCCTCACCCATTCGCAGTGGTCCCCAGCACCGCCACTGTGGTGATCGTGGTGTGCGTCAGCTTCCTGGTTTTCATGATCATCCTGGGAGTGTTTCGGATCCGGGCTGCACACCAGCGAACGATGCGGGACCAGGACACGGGGAAGGAGAATGAGATGGACTGGGACGACTCTGCGCTGACCATCACCGTGAACCCCATGGAGACGTATGAGGACCAGCACAGCAGTGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGAGCGAGGATGGGGAGGAGGAGGAGGAGGAGGACATCACCAGTGCGGAGTCAGAGAGCAGTGAGGAGGAGGGCGGCCCTGGCGATGGCCAGAACGCGACCCGGCAGCAGCAGCTGGAGTGGGACGATTCCACGCTCAGCTACTGA
Clstn1 PREDICTED: calsyntenin-1 [Heterocephalus glaber]
Length: 1287 aa View alignments>XP_004863980.1 MSSAGSEPGTGAVTAKGHTKVAWEVCVPSEYRCTSPLYNGAAESQGAVPQRGTLLGSGSEKGRRAGTQGEGTTPDVPGVLCVWGAVAPSQAPRIPQEEPAPPPRVPVPVPDLSRLTPASDASPDPSSLRSPPSAEDAAEVQGGTGRPAGRRWGVRAPPGCEGGEPGSFGCRGGAPRAWRPQHRSEARVGNEGTATRGARLAGPGGGAALGANGEPALGRAPSGRALPRPPGARAPGAAPCPPPPARRARPAPPCRSPCRTEARADAAAILVAAAASAKRCSRREGAAAGAGPGLGTAPPALPPAARRAAPQRPAAGLLLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLMALDKDAPLRFAESYEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQAYDCGKGPDGTSMKKSHKSTVHIQVNDVNEYAPVFKEKSYKATVTEGKQYDSILRVEAVDADCSPQFSQICSYDIVTPDVPFAVDKDGYIKNTEKLNYGKERQYKLTVTAYDCGKKRATEDVLVKISIKPACTPGWQGWSNRVEYEPGTGALAVFPNIHLETCDEPVASVQATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTAELLPSPGSSFNWTVGLPTDNGHDSDQVFEFNGTQAVRIPDGVVSISPKEPFTISVWMRHGPFGRRKETILCSSDKTDMNRHHYSLYIHGCRLIFLLRQDPSEEKKYKPAEFHWKLNQVCDEEWHHFVLNVELPSVTLYVDGVSHEPFSVTEDYPLHPSKIDTQLVVGACWQEYSGVENDNDTEPVTVASAGGDLHMTQFFRGNLAGLTVRTGKLADKKVIDCLYTCKEGLDLQVPEDSSAVQVRPSPGQSVLTLEGDDIGELDKAMQHLSYLNSRQFPTPGIRRLRVTSTVKCFHEATTCIQVPPVEGYVMVLQPEEPKISLSGVHHFARAASEFESSEGVFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEEVVHDLDTCEVTVEGEELNLEQESLEVDEARLQQKGIEVSRSGLGMVLRGVETMVSYEEVLHLLRYRNWHTRSLLDRKFKLICSELNGRYLSNEFKVEVNVIHTANPVEHANHMAAQPQFVHPEHHSFVDLSGHNLASPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEEEEESEDGEEEEEEDITSAESESSEEEGGPGDGQNATRQQQLEWDDSTLSY