Details from NCBI annotation

Gene Symbol Arhgef16
Gene Name Rho guanine nucleotide exchange factor (GEF) 16, transcript variant X8
Entrez Gene ID 101719690

Database interlinks

Part of NW_004624818.1 (Scaffold)

For more information consult the page for NW_004624818.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARHGEF16 ENSCPOG00000023427 (Guinea pig)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 16

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016343, Guinea pig)

Protein Percentage 82.98%
CDS Percentage 88.79%
Ka/Ks Ratio 0.15882 (Ka = 0.0799, Ks = 0.5029)

ARHGEF16 ENSG00000130762 (Human)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 16

External Links

Gene Match (Ensembl Protein ID: ENSP00000367629, Human)

Protein Percentage 80.51%
CDS Percentage 84.23%
Ka/Ks Ratio 0.10079 (Ka = 0.0997, Ks = 0.9887)

Arhgef16 ENSMUSG00000029032 (Mouse)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 16

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030898, Mouse)

Protein Percentage 80.93%
CDS Percentage 81.54%
Ka/Ks Ratio 0.07299 (Ka = 0.1007, Ks = 1.3795)

Arhgef16 ENSRNOG00000046803 (Rat)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 16 (Arhgef16), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066478, Rat)

Protein Percentage 79.75%
CDS Percentage 79.89%
Ka/Ks Ratio 0.06134 (Ka = 0.1115, Ks = 1.8181)

Genome Location

Sequence Coding sequence

Length: 2337 bp    Location: 6959239..6949770   Strand: -
>XM_004863778.1
ATGAGCCACGAGCAGGTGCCGGGCCGTCCCTGGGCGACTCTTGGTGACCAGGGCTGTGTGCACCACACCCTAGGACCTGTCCCGGGCCCATCTGCCCCTTGGGAGATGCTCAGGCGCAGGAGGGTGTGGGCCTGGAGGCCCCGGGAGGCGCCCCTGCTGCGCCTTCCTCACCTCTGTCCATCCTTCACCCCAGGCACCTCGGCGCCCAGCATGTCCCAGCGGCCCTCAGACAGCTCCTTGGAGGAGAGGCTGCTGGAAAACCGCTTCCACTCGGAGCTGCAGCTGGATGCCAACGGCAGTCCCTCGTCCAAGCTCCCCATCGTCCGGGGCTCCCTGCGCTCCAGGAGCCATGCCGCCTTCGAGCCGGAGGCCCTGGCGCCCCCACCGTCACCCGCAGAGGACAGGGAGCCACGGGGCATCATCCTGAGCACACAGAGCCCTGCAGCCCTCAAGATGGGCGCTCAGCAGCTCATCCCCCGGAGCCTGGCTGTGGCCAGCAAGGCCAAGACCCCCACCCGCCACCAGAGCTTCGGGGCAGCCGTGCTCAGCAGGGAGGCTGCGCGGCGGGAGCCCCAGCTCCTCTCGGCCCCCAGCTTCTCCTTGGACGACCTGGGCGTGAACGTGAGCCCTGAGGGGACCCTGAAGCGAAACCTGCGGACCCAGTCTTACCGCGCGGCCATGAAGGCGCTGGGGTCCCCGTGCAGCAAGGGGGACTCCAGCCAGCTCAGCCCCAAACTCCAGGCTCTGGCTGAGGAGCCCAGCCAGCCCCCCACCCAGTGCCCAGCCAAAAGCAAGAGGACACTGGGCCGGAAGCGTGCACACAAGGGCTCCTTCAAGGACGACCCCGGATTCTACCAGGAGATCCGGGAGCGGGGCCTGAACACCAGCCACGAGTCTGATGATGACATGCTCGACGAAGCCCCTGGCCCCGATGGGACCCAGAGGGTGGACACCTCCATCGTGGTCAAGAGCTACCGGCCCGCCCAGGTCACCTGGAGCCAGCTCCCTGAGGTGGTGGAGTCGGGCATCTTGGGGAAGCTATGCACCGAGGAACGCAAGCGGCAGGAGGCCATCTTCGAGATCCTCACGTCCGAGTTCTCCTACCTGCACAGCCTGGGCATCCTGGTGGCTGAGTTCCTGCAGTCCCCAGAGCTGCGGGCCACCATGACGCAGATGGAGCACCACCACCTCTTCTCCAACATCCAGGACGTCCTGGCTGCCAGTAAGAGGTTCTTCGAGGACCTGGAGCAGCGGCACCAGGCGCAGGTGTGCGTGGAGGACATCAGTGACATCCTGGAGGAGCACGCGGAGAGGCACTTCCACCCCTACGTGGCCTACTGCTCCAACGAGGTCTACCAGCAGCGCACACTGCAGAGGCTGACGAACAGCAATGCCGCCTTCCGCGAGGCCCTGCGGAACATCGAGAGGCGGCCGGCGTGCGGGGGGCTGCCCATGATCTCCTTCCTGATCCTGCCCATGCAGCGGGTGACCAGGCTGCCCCTCCTGACTGATACCCTCTGTCTCAAGTCCCAGGGCCACCCCGAAAGGTACAAGGCTGCCAGCCACGCCCTGAAGGCCATCAGCAAGCTGGTGAGGCAGTGTAACGAGGGGGCGCACACCATGGAGCGCACGGAGCAGATGTACATGCTGCAGACACAGCTGGACTTCAGCAAGGTCAAGTCCTTCCCGCTGATCTCCGCCTCCCGCTGGCTGCTGAAGCGTGGCGAGCTCTTCCTGGTGGAGGAAGCCGGGCTGTTTAGGAAAATTGCCAGCCGGCCCACCTGTTACCTGTTCCTGTTCAACGATGTCCTGATCATCACCAAGAAGAAGAGCGAGGACAGCTACGCGGTGCAGGACTATGGCCAGCTGGACCACGTCCAGGTCCGGAAGCTGGAGCCCTCGGAGCCGTATCTGCCAGGGGGTGGCAACCGCAGCTCCTCCGTGCCCCACCCCTTCCGGGTGACCCTGCTGCGGAACAGCGAGGGCCGCCAGGAGCAGGTCCTGCTGTCCTCAGACTCTGCGAGCGACCGAGCACGGTGGATCACAGCGCTCACCTACCAGGAGAGCCAGTGGCAGGGCCCCACCGACAAAGGCGAGCTGCCCCAGGTGGAGGTCACCAAGGCCTACCTGGCCAAGCAGGCGGACGAGATCTCGCTGCAGCAGGCTGACGTGGTGCTGGTCATGGAGGAGGAGGACGGGTGGCTGCACGGAGAGCGGCTCCGGGATGGCGAGGTGGGCTGGTTCCCCGAGGACGTGGCCCGCCGCATCACCAGCCCCGTGGCCGTGGAGGACAACGTGCGCCGCATGGAGCGGCTGCGGGTGGAGACCAACGTGTAG

Related Sequences

XP_004863835.1 Protein

Arhgef16 PREDICTED: rho guanine nucleotide exchange factor 16 isoform X8 [Heterocephalus glaber]

Length: 778 aa      View alignments
>XP_004863835.1
MSHEQVPGRPWATLGDQGCVHHTLGPVPGPSAPWEMLRRRRVWAWRPREAPLLRLPHLCPSFTPGTSAPSMSQRPSDSSLEERLLENRFHSELQLDANGSPSSKLPIVRGSLRSRSHAAFEPEALAPPPSPAEDREPRGIILSTQSPAALKMGAQQLIPRSLAVASKAKTPTRHQSFGAAVLSREAARREPQLLSAPSFSLDDLGVNVSPEGTLKRNLRTQSYRAAMKALGSPCSKGDSSQLSPKLQALAEEPSQPPTQCPAKSKRTLGRKRAHKGSFKDDPGFYQEIRERGLNTSHESDDDMLDEAPGPDGTQRVDTSIVVKSYRPAQVTWSQLPEVVESGILGKLCTEERKRQEAIFEILTSEFSYLHSLGILVAEFLQSPELRATMTQMEHHHLFSNIQDVLAASKRFFEDLEQRHQAQVCVEDISDILEEHAERHFHPYVAYCSNEVYQQRTLQRLTNSNAAFREALRNIERRPACGGLPMISFLILPMQRVTRLPLLTDTLCLKSQGHPERYKAASHALKAISKLVRQCNEGAHTMERTEQMYMLQTQLDFSKVKSFPLISASRWLLKRGELFLVEEAGLFRKIASRPTCYLFLFNDVLIITKKKSEDSYAVQDYGQLDHVQVRKLEPSEPYLPGGGNRSSSVPHPFRVTLLRNSEGRQEQVLLSSDSASDRARWITALTYQESQWQGPTDKGELPQVEVTKAYLAKQADEISLQQADVVLVMEEEDGWLHGERLRDGEVGWFPEDVARRITSPVAVEDNVRRMERLRVETNV